Prupe.4G024400_v2.0.a1

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1146874 .. 1156828
9955 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G024400.3

Sequence Viewer

Length: 1623 bp
ATGGGGGCTTGTCAGTTAGTTGGTCCCATGCCTGCCACAGATGTTGCATCAAAAAGCATTGTTATGGAGAATTTGTCAGCACTTCATGCTGTCCTTGTGGTTGAGATGTGCTTTTCAATTCTCATAGAATCTTGTAATCACATATCTTTGAAAGGAAGCTCAGCTTCATCATCCCCTTTCCCAAGCAACTTCCTCTTTGGAACTGCATCCTCTTCTTACCAGTTTGAGGGAGCTTTTCTGACTGATGGTAAAGGCCTCAACAACTGGGATGTTTTTACTCATAAGCCTGGTCATATCTCAGATGGAACTAATGGAGATATTGCTGTTGATCAGTACCATCTTTATCTGGAAGATTTAGATCTCATGAGTTACATTGGAGTTGATTCTTACCGGTTTTCTATAGCATGGGCAAGAGTTCTACCCAAAGGAAGATTTGGAAAAGTGAATAGAGCCGGCATTGACCACTATAACAAGTTCATCGACGCTCTTCTGAGCAGAGGGATCCAGCCATTCGTGACATTGTCTCATTACGACATTCCTCAGGAACTTGAAGACAGATATGGAGCTTGGCTAAGCCCCAAAGTGCAGGAGGATTTCAAATATTATGCAAATACATGTTTCAAATTATTTGGAGACAGAGTTAAGTACTGGGTGACTTTCAATGAGCCCAATGTTGTAGTTATTCGTGGCTATAGGTCAGGGATTTACCCACCATCTCGTTGTTCTAGCCCATTTGGGAATTGTACTAGTGGGAATTCAGAGAAGGAGCCTTTCATTGCGGCTCATAACATCATTCTATCCCATGCAGCTGCTGTGAATATATACCGAACCCAATACCAGAAAAAACAAGGAGGTAGCATTGGAATGATCATGAATGCTGTATGGTATGAACCCATCAGCAACTCCTTAGAAGACAAGTTGGCAGCTGAGAGGGCTCAATCTTTCTACTTGAACTGGTTCTTAGATCCAATTGTACATGGGAAATATCCTGCCGAAATGCGGGAGATTCTAGGAGCTGATTTGCCTATATTTTCAGAATCTGATGTGGAGATGCTGAGGAAGAACAGATTAGATTTCATTGGCATCAACCACTATACCAGCTTTTACATAAAAGACTGTATCTTTTCGGAATGTGAACCAGGACCAGGAGCTTCAAGGACGGAGGGTTTCGCTTTGCGAACCGCAGAAAAAGATGGAGTCTTCCTTGGAGAACCAACTACGGTTGACTGGCTGTATGTGTACCCTCAAGGAATGGACAAGATTGTAACCTACGTAAAAGACAGATACAATAATACACCAATCTTCATCACAGAAAATGGGTTTGGTGAGACTGAGGTTTCGAATTTCACCAATGAAGAATTACTCAATGATGTCAAGAGAGTGAAGTACATGAGGTCCTACTTACATGCACTAGCAGAAGCAATGAGGAAAGGAGCAGATGTAAGAGGGTACTTCGTGTGGTCGTTGCTTGACAATTTCGAGTGGACCAGTGGATATACTGTTCGGTTTGGACTTCACTATGTTGATTATGCCACTCTCAAAAGAACTCAAAGGCTCTCAGTGGATTGGTACAAACAATTTATTTCTAATCATACGGTGCAAATCTTAAGTGCCACAGCATGA

Protein Analysis

541

Amino Acids

61.14

Weight (kDa)

5.9

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 779, 1000, 1182
AclWI GGATC 3 cut(s) 496, 509, 959
AcsI RAATTY 3 cut(s) 70, 754, 1342
AfaI GTAC 8 cut(s) 335, 647, 745, 975, 1241, 1388, 1451, 1571
AfiI CCNNNNNNNGG 3 cut(s) 226, 999, 1145
AflII CTTAAG 1 cut(s) 1606
AflIII ACRYGT 1 cut(s) 614
AgeI ACCGGT 1 cut(s) 390
AgsI TTSAA 8 cut(s) 117, 151, 551, 598, 622, 661, 952, 1155
AhlI ACTAGT 1 cut(s) 746
AjnI CCWGG 3 cut(s) 286, 1138, 1144
AjuI GAANNNNNNNTTGG 2 cut(s) 1305, 1337
AloI GAACNNNNNNTCC 2 cut(s) 1485, 1517
AluBI AGCT 9 cut(s) 159, 164, 233, 566, 809, 926, 1016, 1101, 1151
AluI AGCT 9 cut(s) 159, 164, 233, 566, 809, 926, 1016, 1101, 1151
Alw26I GTCTC 3 cut(s) 528, 627, 1322
AlwI GGATC 3 cut(s) 496, 509, 959
AlwNI CAGNNNCTG 2 cut(s) 812, 1040
AoxI GGCC 1 cut(s) 253
ApeKI GCWGC 3 cut(s) 806, 809, 923
ApoI RAATTY 3 cut(s) 70, 754, 1342
ArsI GACNNNNNNTTYG 2 cut(s) 1321, 1353
AsiGI ACCGGT 1 cut(s) 390
Asp700I GAANNNNTTC 1 cut(s) 956
AspS9I GGNCC 4 cut(s) 23, 1142, 1395, 1485
AsuHPI GGTGA 3 cut(s) 664, 1337, 1339
AsuII TTCGAA 1 cut(s) 1340
AvaII GGWCC 4 cut(s) 23, 1142, 1395, 1485
AxyI CCTNAGG 1 cut(s) 540
BamHI GGATCC 1 cut(s) 501
BanII GRGCYC 2 cut(s) 669, 937
BbsI GAAGAC 3 cut(s) 558, 918, 1192
BbvCI CCTCAGC 1 cut(s) 1055
BbvI GCAGC 3 cut(s) 796, 818, 935
BccI CCATC 6 cut(s) 239, 296, 345, 721, 902, 1187
BciT130I CCWGG 3 cut(s) 288, 1140, 1146
BclI TGATCA 2 cut(s) 328, 867
BcoDI GTCTC 3 cut(s) 528, 627, 1322
BcuI ACTAGT 1 cut(s) 746
BfaI CTAG 4 cut(s) 726, 747, 1010, 1412
BfmI CTRYAG 2 cut(s) 399, 691
BfrI CTTAAG 1 cut(s) 1606
BglII AGATCT 1 cut(s) 358
BisI GCNGC 4 cut(s) 780, 807, 810, 924
BlpI GCTNAGC 2 cut(s) 160, 572
BlsI GCNGC 4 cut(s) 781, 808, 811, 925
BmcAI AGTACT 1 cut(s) 647
Bme1390I CCNGG 3 cut(s) 288, 1140, 1146
Bme18I GGWCC 4 cut(s) 23, 1142, 1395, 1485
BmgT120I GGNCC 4 cut(s) 23, 1142, 1395, 1485
BmiI GGNNCC 3 cut(s) 25, 503, 768
BmrFI CCNGG 3 cut(s) 288, 1140, 1146
BmrI ACTGGG 2 cut(s) 274, 658
BmsI GCATC 4 cut(s) 56, 215, 1041, 1092
BmuI ACTGGG 2 cut(s) 274, 658
BpiI GAAGAC 3 cut(s) 558, 918, 1192
Bpu10I CCTNAGC 1 cut(s) 1055
Bpu1102I GCTNAGC 2 cut(s) 160, 572
Bpu14I TTCGAA 1 cut(s) 1340
BpuEI CTTGAG 1 cut(s) 1230
BsaAI YACGTR 1 cut(s) 1273
BsaBI GATNNNNATC 1 cut(s) 357
BsaJI CCNNGG 1 cut(s) 1204
BsaWI WCCGGW 1 cut(s) 390
BsaXI ACNNNNNCTCC 6 cut(s) 59, 89, 624, 654, 1425, 1455
Bsc4I CCNNNNNNNGG 3 cut(s) 226, 999, 1145
Bse118I RCCGGY 2 cut(s) 390, 452
Bse1I ACTGG 6 cut(s) 220, 269, 653, 959, 1232, 1488
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 2 cut(s) 774, 1428
Bse8I GATNNNNATC 1 cut(s) 357
BseBI CCWGG 3 cut(s) 288, 1140, 1146
BseDI CCNNGG 1 cut(s) 1204
BseGI GGATG 3 cut(s) 170, 206, 274
BseJI GATNNNNATC 1 cut(s) 357
BseLI CCNNNNNNNGG 3 cut(s) 226, 999, 1145
BseMI GCAATG 2 cut(s) 774, 1428
BseMII CTCAG 8 cut(s) 174, 312, 482, 554, 918, 1046, 1323, 1572
BseNI ACTGG 6 cut(s) 220, 269, 653, 959, 1232, 1488
BseXI GCAGC 3 cut(s) 796, 818, 935
BsgI GTGCAG 1 cut(s) 605
BshFI GGCC 1 cut(s) 255
BshTI ACCGGT 1 cut(s) 390
BsiSI CCGG 2 cut(s) 391, 453
BslFI GGGAC 1 cut(s) 9
BslI CCNNNNNNNGG 3 cut(s) 226, 999, 1145
BsmAI GTCTC 3 cut(s) 528, 627, 1322
BsmFI GGGAC 1 cut(s) 9
BsmI GAATGC 1 cut(s) 880
BsnI GGCC 1 cut(s) 255
Bsp119I TTCGAA 1 cut(s) 1340
Bsp1286I GDGCHC 2 cut(s) 669, 937
Bsp1407I TGTACA 1 cut(s) 973
Bsp143I GATC 5 cut(s) 328, 358, 501, 867, 964
Bsp1720I GCTNAGC 2 cut(s) 160, 572
BspACI CCGC 3 cut(s) 779, 1000, 1182
BspANI GGCC 1 cut(s) 255
BspCNI CTCAG 8 cut(s) 173, 311, 483, 553, 919, 1047, 1324, 1571
BspHI TCATGA 2 cut(s) 363, 870
BspLI GGNNCC 3 cut(s) 25, 503, 768
BspPI GGATC 3 cut(s) 496, 509, 959
BspQI GCTCTTC 1 cut(s) 492
BspT104I TTCGAA 1 cut(s) 1340
BspTI CTTAAG 1 cut(s) 1606
BsrDI GCAATG 2 cut(s) 774, 1428
BsrFI RCCGGY 2 cut(s) 390, 452
BsrGI TGTACA 1 cut(s) 973
BsrI ACTGG 6 cut(s) 220, 269, 653, 959, 1232, 1488
BssAI RCCGGY 2 cut(s) 390, 452
BssECI CCNNGG 1 cut(s) 1204
BssMI GATC 5 cut(s) 328, 358, 501, 867, 964
BssT1I CCWWGG 1 cut(s) 1204
Bst2UI CCWGG 3 cut(s) 288, 1140, 1146
Bst4CI ACNGT 4 cut(s) 1118, 1222, 1501, 1597
Bst6I CTCTTC 2 cut(s) 217, 492
BstAFI CTTAAG 1 cut(s) 1606
BstAPI GCANNNNNTGC 1 cut(s) 86
BstAUI TGTACA 1 cut(s) 973
BstBAI YACGTR 1 cut(s) 1273
BstBI TTCGAA 1 cut(s) 1340
BstC8I GCNNGC 2 cut(s) 33, 454
BstF5I GGATG 3 cut(s) 170, 206, 274
BstKTI GATC 5 cut(s) 331, 361, 504, 870, 967
BstMAI GTCTC 3 cut(s) 528, 627, 1322
BstMBI GATC 5 cut(s) 328, 358, 501, 867, 964
BstMWI GCNNNNNNNGC 2 cut(s) 86, 932
BstNI CCWGG 3 cut(s) 288, 1140, 1146
BstNSI RCATGY 2 cut(s) 618, 1409
BstSCI CCNGG 3 cut(s) 286, 1138, 1144
BstSFI CTRYAG 2 cut(s) 399, 691
BstSNI TACGTA 1 cut(s) 1273
BstV1I GCAGC 3 cut(s) 796, 818, 935
BstV2I GAAGAC 3 cut(s) 558, 918, 1192
BstX2I RGATCY 3 cut(s) 358, 501, 964
BstYI RGATCY 3 cut(s) 358, 501, 964
Bsu36I CCTNAGG 1 cut(s) 540
BsuRI GGCC 1 cut(s) 255
BtsCI GGATG 3 cut(s) 170, 206, 274
BtsIMutI CAGTG 2 cut(s) 1495, 1566
Cac8I GCNNGC 2 cut(s) 33, 454
CaiI CAGNNNCTG 2 cut(s) 812, 1040
CciI TCATGA 2 cut(s) 363, 870
Cfr10I RCCGGY 2 cut(s) 390, 452
Cfr13I GGNCC 4 cut(s) 23, 1142, 1395, 1485
CseI GACGC 1 cut(s) 491
Csp6I GTAC 8 cut(s) 334, 646, 744, 974, 1240, 1387, 1450, 1570
CspAI ACCGGT 1 cut(s) 390
CspCI CAANNNNNGTGG 2 cut(s) 25, 60
CviQI GTAC 8 cut(s) 334, 646, 744, 974, 1240, 1387, 1450, 1570
DpnI GATC 5 cut(s) 330, 360, 503, 869, 966
DpnII GATC 5 cut(s) 328, 358, 501, 867, 964
Eam1104I CTCTTC 2 cut(s) 217, 492
EarI CTCTTC 2 cut(s) 217, 492
Eco105I TACGTA 1 cut(s) 1273
Eco130I CCWWGG 1 cut(s) 1204
Eco147I AGGCCT 1 cut(s) 255
Eco24I GRGCYC 2 cut(s) 669, 937
Eco47I GGWCC 4 cut(s) 23, 1142, 1395, 1485
Eco81I CCTNAGG 1 cut(s) 540
EcoO109I RGGNCCY 1 cut(s) 1395
EcoRI GAATTC 1 cut(s) 754
EcoRII CCWGG 3 cut(s) 286, 1138, 1144
EcoT14I CCWWGG 1 cut(s) 1204
EcoT38I GRGCYC 2 cut(s) 669, 937
ErhI CCWWGG 1 cut(s) 1204
FalI AAGNNNNNCTT 2 cut(s) 148, 180
FaqI GGGAC 1 cut(s) 9
FauI CCCGC 1 cut(s) 993
FbaI TGATCA 2 cut(s) 328, 867
Fnu4HI GCNGC 4 cut(s) 780, 807, 810, 924
FokI GGATG 3 cut(s) 157, 193, 281
FriOI GRGCYC 2 cut(s) 669, 937
Fsp4HI GCNGC 4 cut(s) 780, 807, 810, 924
FspBI CTAG 4 cut(s) 726, 747, 1010, 1412
GluI GCNGC 4 cut(s) 780, 807, 810, 924
HaeIII GGCC 1 cut(s) 255
HapII CCGG 2 cut(s) 391, 453
HgaI GACGC 1 cut(s) 491
HincII GTYRAC 1 cut(s) 1225
HindII GTYRAC 1 cut(s) 1225
HinfI GANTC 5 cut(s) 128, 383, 1006, 1037, 1197
HpaII CCGG 2 cut(s) 391, 453
HphI GGTGA 3 cut(s) 664, 1337, 1339
Hpy166II GTNNAC 4 cut(s) 1136, 1225, 1240, 1485
Hpy188I TCNGA 7 cut(s) 240, 301, 492, 760, 1036, 1042, 1129
Hpy188III TCNNGA 6 cut(s) 347, 364, 514, 542, 871, 1375
Hpy8I GTNNAC 4 cut(s) 1136, 1225, 1240, 1485
Hpy99I CGWCG 1 cut(s) 485
HpyAV CCTTC 1 cut(s) 757
HpyCH4III ACNGT 4 cut(s) 1118, 1222, 1501, 1597
HpyCH4IV ACGT 1 cut(s) 1272
HpyCH4V TGCA 7 cut(s) 47, 206, 586, 608, 806, 1409, 1600
HpyF10VI GCNNNNNNNGC 2 cut(s) 86, 932
HpySE526I ACGT 1 cut(s) 1272
KroI GCCGGC 1 cut(s) 452
KroNI GCCGGC 1 cut(s) 454
Ksp22I TGATCA 2 cut(s) 328, 867
Kzo9I GATC 5 cut(s) 328, 358, 501, 867, 964
LguI GCTCTTC 1 cut(s) 492
LmnI GCTCC 6 cut(s) 230, 563, 766, 1013, 1148, 1433
Lsp1109I GCAGC 3 cut(s) 796, 818, 935
LweI GCATC 4 cut(s) 56, 215, 1041, 1092
MaeI CTAG 4 cut(s) 726, 747, 1010, 1412
MaeII ACGT 1 cut(s) 1272
MaeIII GTNAC 4 cut(s) 368, 514, 652, 1264
MalI GATC 5 cut(s) 330, 360, 503, 869, 966
MboI GATC 5 cut(s) 328, 358, 501, 867, 964
MfeI CAATTG 1 cut(s) 969
MflI RGATCY 3 cut(s) 358, 501, 964
MhlI GDGCHC 2 cut(s) 669, 937
MlyI GAGTC 1 cut(s) 1206
MroNI GCCGGC 1 cut(s) 452
MroXI GAANNNNTTC 1 cut(s) 956
MseI TTAA 2 cut(s) 642, 1607
MslI CAYNNNNRTG 2 cut(s) 62, 863
MspA1I CMGCKG 2 cut(s) 809, 926
MspCI CTTAAG 1 cut(s) 1606
MspI CCGG 2 cut(s) 391, 453
MspR9I CCNGG 3 cut(s) 288, 1140, 1146
MunI CAATTG 1 cut(s) 969
Mva1269I GAATGC 1 cut(s) 880
MvaI CCWGG 3 cut(s) 288, 1140, 1146
MwoI GCNNNNNNNGC 2 cut(s) 86, 932
NaeI GCCGGC 1 cut(s) 454
NdeII GATC 5 cut(s) 328, 358, 501, 867, 964
NgoMIV GCCGGC 1 cut(s) 452
NlaIV GGNNCC 3 cut(s) 25, 503, 768
NmuCI GTSAC 2 cut(s) 514, 652
NspI RCATGY 2 cut(s) 618, 1409
NspV TTCGAA 1 cut(s) 1340
PagI TCATGA 2 cut(s) 363, 870
PceI AGGCCT 1 cut(s) 255
PciI ACATGT 1 cut(s) 614
PciSI GCTCTTC 1 cut(s) 492
PctI GAATGC 1 cut(s) 880
PdiI GCCGGC 1 cut(s) 454
PdmI GAANNNNTTC 1 cut(s) 956
PfeI GAWTC 4 cut(s) 128, 383, 1006, 1037
PflFI GACNNNGTC 1 cut(s) 520
PinAI ACCGGT 1 cut(s) 390
PkrI GCNGC 4 cut(s) 781, 808, 811, 925
PleI GAGTC 1 cut(s) 1205
PpsI GAGTC 1 cut(s) 1205
Ppu21I YACGTR 1 cut(s) 1273
PpuMI RGGWCCY 1 cut(s) 1395
PscI ACATGT 1 cut(s) 614
Psp5II RGGWCCY 1 cut(s) 1395
Psp6I CCWGG 3 cut(s) 286, 1138, 1144
PspGI CCWGG 3 cut(s) 286, 1138, 1144
PspN4I GGNNCC 3 cut(s) 25, 503, 768
PspPI GGNCC 4 cut(s) 23, 1142, 1395, 1485
PspPPI RGGWCCY 1 cut(s) 1395
PstNI CAGNNNCTG 2 cut(s) 812, 1040
PsuI RGATCY 3 cut(s) 358, 501, 964
PsyI GACNNNGTC 1 cut(s) 520
PvuII CAGCTG 2 cut(s) 809, 926
RsaI GTAC 8 cut(s) 335, 647, 745, 975, 1241, 1388, 1451, 1571
RsaNI GTAC 8 cut(s) 334, 646, 744, 974, 1240, 1387, 1450, 1570
RseI CAYNNNNRTG 2 cut(s) 62, 863
SapI GCTCTTC 1 cut(s) 492
SaqAI TTAA 2 cut(s) 642, 1607
SatI GCNGC 4 cut(s) 780, 807, 810, 924
Sau3AI GATC 5 cut(s) 328, 358, 501, 867, 964
Sau96I GGNCC 4 cut(s) 23, 1142, 1395, 1485
ScaI AGTACT 1 cut(s) 647
SchI GAGTC 1 cut(s) 1206
ScrFI CCNGG 3 cut(s) 288, 1140, 1146
SduI GDGCHC 2 cut(s) 669, 937
SfaNI GCATC 4 cut(s) 56, 215, 1041, 1092
SfcI CTRYAG 2 cut(s) 399, 691
SfuI TTCGAA 1 cut(s) 1340
SinI GGWCC 4 cut(s) 23, 1142, 1395, 1485
SmiMI CAYNNNNRTG 2 cut(s) 62, 863
SmlI CTYRAG 2 cut(s) 1245, 1606
SmoI CTYRAG 2 cut(s) 1245, 1606
SnaBI TACGTA 1 cut(s) 1273
SpeI ACTAGT 1 cut(s) 746
SseBI AGGCCT 1 cut(s) 255
SsiI CCGC 3 cut(s) 779, 1000, 1182
SspI AATATT 1 cut(s) 602
SspMI CTAG 4 cut(s) 726, 747, 1010, 1412
StuI AGGCCT 1 cut(s) 255
StyD4I CCNGG 3 cut(s) 286, 1138, 1144
StyI CCWWGG 1 cut(s) 1204
TaaI ACNGT 4 cut(s) 1118, 1222, 1501, 1597
TaiI ACGT 1 cut(s) 1275
TaqI TCGA 3 cut(s) 480, 1340, 1479
TatI WGTACW 4 cut(s) 645, 743, 973, 1386
TauI GCSGC 1 cut(s) 782
TfiI GAWTC 4 cut(s) 128, 383, 1006, 1037
Tru1I TTAA 2 cut(s) 642, 1607
Tru9I TTAA 2 cut(s) 642, 1607
TscAI CASTG 2 cut(s) 1495, 1566
TseFI GTSAC 2 cut(s) 514, 652
TseI GCWGC 3 cut(s) 806, 809, 923
Tsp45I GTSAC 2 cut(s) 514, 652
TspDTI ATGAA 9 cut(s) 74, 156, 466, 763, 887, 903, 1066, 1294, 1368
TspGWI ACGGA 1 cut(s) 1175
TspRI CASTG 2 cut(s) 1495, 1566
Tth111I GACNNNGTC 1 cut(s) 520
Vha464I CTTAAG 1 cut(s) 1606
VpaK11BI GGWCC 4 cut(s) 23, 1142, 1395, 1485
XapI RAATTY 3 cut(s) 70, 754, 1342
XceI RCATGY 2 cut(s) 618, 1409
XmnI GAANNNNTTC 1 cut(s) 956
XspI CTAG 4 cut(s) 726, 747, 1010, 1412
ZrmI AGTACT 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.