Prupe.7G097000_v2.0.a1

Late embryogenesis abundant protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0001922
Physical Location & Seq
Forward (+)
12851334 .. 12856666
5333 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G097000.1

Sequence Viewer

Length: 786 bp
ATGGCTACCTCAGCTGCCGGCGCCGATGATGGTCGTAACAAGACGGTGACCGGCTACCCAGTTGAGCAGGGTCAATTCGCAGCCGGCTACCCAGCCGCCGGAGCCTACCCCTACGTGGCCCCACCGCCGCCTCCTCACGCCAACACTTACCGGCCCATGGGCCCACCTCCTTACTACGCCCCTCGGCCCACTGGGCCCATCACGCCCAATAGGCCCACCCTCCTCTGCCGCCTCCTCATTGCCGCCATCGCCGTCTTCGCCATCATGTCCCTCGTCTTCTTCATCGCCTGGCTTGCACTCCGCCCCCGCCTCCCCGAGTTCCGGGTCGAATCGGCCTCCGTCTTCCCGCTCAACGCCACTGGCTCCGAGCTCACCGCCACCTGGGACCTCACCCTCCTTGCCAACAACCCCAACCACAAGCTCAGAATTTACTACGACAGCATCCAGGCCTCACTATTCTACGGCGACGATTACCGGCTCGCCACGACGTCGTTGCCTCCCTTTGTTTTGACCAAGAGGAACCAGACGCGTGTCGGGTTCAAGCTGGCGACGGTGGGGGAGTACGTCGGCAATTACGTGGCCAAGGGGATCTCCGACGAGAGGGATCGTGGGTCGGTGAGGTTCGGGCTAGGAGTTTTTGCTTCGGTTCGGTTTAGGTCTGGAGTGTTCCAGTCGAGGCCTCGCGTGTTGCGGGTCTTCTGCGAAAGGGTCGATTTCGGGTTTGCCCAGAAGAATGGGACGGGGACTTTGACGGGTCAGTCAAGTCCGTGTGTGGTTGACGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LEA_2

Protein Analysis

262

Amino Acids

28.46

Weight (kDa)

9.7

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 757
AatII GACGTC 1 cut(s) 491
AccB1I GGYRCC 1 cut(s) 20
AccBSI CCGCTC 1 cut(s) 349
AccII CGCG 2 cut(s) 529, 684
AclWI GGATC 2 cut(s) 596, 612
AcoI YGGCCR 1 cut(s) 579
AcsI RAATTY 1 cut(s) 426
AcyI GRCGYC 2 cut(s) 21, 488
AfaI GTAC 1 cut(s) 563
AfiI CCNNNNNNNGG 6 cut(s) 98, 115, 157, 321, 381, 600
AflIII ACRYGT 2 cut(s) 527, 780
AgsI TTSAA 1 cut(s) 541
AjiI CACGTC 1 cut(s) 781
AjnI CCWGG 3 cut(s) 287, 380, 444
AluBI AGCT 4 cut(s) 14, 370, 421, 544
AluI AGCT 4 cut(s) 14, 370, 421, 544
Alw21I GWGCWC 1 cut(s) 372
AlwI GGATC 2 cut(s) 596, 612
Ama87I CYCGRG 1 cut(s) 314
ApaI GGGCCC 2 cut(s) 164, 198
ApeKI GCWGC 2 cut(s) 14, 80
ApoI RAATTY 1 cut(s) 426
ArsI GACNNNNNNTTYG 2 cut(s) 730, 762
AspLEI GCGC 1 cut(s) 23
AspS9I GGNCC 9 cut(s) 118, 153, 160, 161, 186, 194, 195, 213, 385
AsuC2I CCSGG 1 cut(s) 323
AsuHPI GGTGA 4 cut(s) 58, 364, 382, 628
AvaI CYCGRG 1 cut(s) 314
AvaII GGWCC 1 cut(s) 385
BaeGI GKGCMC 2 cut(s) 164, 198
BalI TGGCCA 1 cut(s) 581
BanI GGYRCC 1 cut(s) 20
BanII GRGCYC 3 cut(s) 164, 198, 372
BbsI GAAGAC 4 cut(s) 247, 268, 334, 688
Bbv12I GWGCWC 1 cut(s) 372
BbvCI CCTCAGC 1 cut(s) 10
BbvI GCAGC 1 cut(s) 92
BccI CCATC 4 cut(s) 23, 206, 254, 269
BceAI ACGGC 2 cut(s) 236, 478
BcgI CGANNNNNNTGC 2 cut(s) 475, 509
BciT130I CCWGG 3 cut(s) 289, 382, 446
BcnI CCSGG 1 cut(s) 323
BfaI CTAG 1 cut(s) 629
BfoI RGCGCY 1 cut(s) 24
BglI GCCNNNNNGGC 2 cut(s) 193, 211
BisI GCNGC 6 cut(s) 15, 81, 96, 128, 229, 243
BlsI GCNGC 6 cut(s) 16, 82, 97, 129, 230, 244
Bme1390I CCNGG 4 cut(s) 289, 323, 382, 446
Bme18I GGWCC 1 cut(s) 385
BmeT110I CYCGRG 1 cut(s) 314
BmgBI CACGTC 1 cut(s) 781
BmgT120I GGNCC 9 cut(s) 118, 153, 160, 161, 186, 194, 195, 213, 385
BmiI GGNNCC 8 cut(s) 22, 103, 120, 162, 196, 364, 386, 521
BmrFI CCNGG 4 cut(s) 289, 323, 382, 446
BmrI ACTGGG 2 cut(s) 53, 201
BmsI GCATC 1 cut(s) 450
BmuI ACTGGG 2 cut(s) 53, 201
BoxI GACNNNNGTC 1 cut(s) 530
BpiI GAAGAC 4 cut(s) 247, 268, 334, 688
BpmI CTGGAG 1 cut(s) 681
Bpu10I CCTNAGC 1 cut(s) 10
BpuMI CCSGG 1 cut(s) 323
BsaAI YACGTR 2 cut(s) 115, 577
BsaHI GRCGYC 2 cut(s) 21, 488
BsaJI CCNNGG 4 cut(s) 156, 182, 381, 582
Bsc4I CCNNNNNNNGG 6 cut(s) 98, 115, 157, 321, 381, 600
Bse118I RCCGGY 5 cut(s) 17, 50, 83, 150, 474
Bse1I ACTGG 4 cut(s) 59, 196, 364, 670
Bse3DI GCAATG 1 cut(s) 237
BseBI CCWGG 3 cut(s) 289, 382, 446
BseDI CCNNGG 4 cut(s) 156, 182, 381, 582
BseGI GGATG 1 cut(s) 441
BseLI CCNNNNNNNGG 6 cut(s) 98, 115, 157, 321, 381, 600
BseMI GCAATG 1 cut(s) 237
BseMII CTCAG 2 cut(s) 24, 436
BseNI ACTGG 4 cut(s) 59, 196, 364, 670
BseRI GAGGAG 3 cut(s) 123, 212, 224
BseSI GKGCMC 2 cut(s) 164, 198
BseXI GCAGC 1 cut(s) 92
BseYI CCCAGC 1 cut(s) 91
Bsh1236I CGCG 2 cut(s) 529, 684
BshNI GGYRCC 1 cut(s) 20
BsiHKAI GWGCWC 1 cut(s) 372
BsiHKCI CYCGRG 1 cut(s) 314
BsiSI CCGG 7 cut(s) 18, 51, 84, 99, 151, 322, 475
BslFI GGGAC 4 cut(s) 253, 398, 751, 757
BslI CCNNNNNNNGG 6 cut(s) 98, 115, 157, 321, 381, 600
BsmFI GGGAC 4 cut(s) 253, 398, 751, 757
BsoBI CYCGRG 1 cut(s) 314
Bsp120I GGGCCC 2 cut(s) 160, 194
Bsp1286I GDGCHC 3 cut(s) 164, 198, 372
Bsp143I GATC 2 cut(s) 588, 604
Bsp19I CCATGG 1 cut(s) 156
BspCNI CTCAG 2 cut(s) 23, 435
BspFNI CGCG 2 cut(s) 529, 684
BspLI GGNNCC 8 cut(s) 22, 103, 120, 162, 196, 364, 386, 521
BspPI GGATC 2 cut(s) 596, 612
BspT107I GGYRCC 1 cut(s) 20
BsrBI CCGCTC 1 cut(s) 349
BsrDI GCAATG 1 cut(s) 237
BsrFI RCCGGY 5 cut(s) 17, 50, 83, 150, 474
BsrI ACTGG 4 cut(s) 59, 196, 364, 670
BssAI RCCGGY 5 cut(s) 17, 50, 83, 150, 474
BssECI CCNNGG 4 cut(s) 156, 182, 381, 582
BssMI GATC 2 cut(s) 588, 604
BssNI GRCGYC 2 cut(s) 21, 488
BssT1I CCWWGG 2 cut(s) 156, 582
Bst2UI CCWGG 3 cut(s) 289, 382, 446
Bst4CI ACNGT 2 cut(s) 46, 553
BstACI GRCGYC 2 cut(s) 21, 488
BstBAI YACGTR 2 cut(s) 115, 577
BstC8I GCNNGC 5 cut(s) 19, 85, 294, 480, 546
BstDEI CTNAG 2 cut(s) 10, 422
BstDSI CCRYGG 1 cut(s) 156
BstEII GGTNACC 1 cut(s) 46
BstF5I GGATG 1 cut(s) 441
BstFNI CGCG 2 cut(s) 529, 684
BstH2I RGCGCY 1 cut(s) 24
BstHHI GCGC 1 cut(s) 23
BstKTI GATC 2 cut(s) 591, 607
BstMBI GATC 2 cut(s) 588, 604
BstMWI GCNNNNNNNGC 9 cut(s) 11, 20, 101, 193, 202, 211, 248, 257, 293
BstNI CCWGG 3 cut(s) 289, 382, 446
BstPAI GACNNNNGTC 1 cut(s) 530
BstPI GGTNACC 1 cut(s) 46
BstSCI CCNGG 4 cut(s) 287, 321, 380, 444
BstSLI GKGCMC 2 cut(s) 164, 198
BstUI CGCG 2 cut(s) 529, 684
BstV1I GCAGC 1 cut(s) 92
BstV2I GAAGAC 4 cut(s) 247, 268, 334, 688
BstX2I RGATCY 1 cut(s) 588
BstXI CCANNNNNNTGG 1 cut(s) 734
BstYI RGATCY 1 cut(s) 588
BtgI CCRYGG 1 cut(s) 156
BtgZI GCGATG 2 cut(s) 232, 268
BtrI CACGTC 1 cut(s) 781
BtsCI GGATG 1 cut(s) 441
BtsIMutI CAGTG 2 cut(s) 189, 357
Cac8I GCNNGC 5 cut(s) 19, 85, 294, 480, 546
CfoI GCGC 1 cut(s) 23
Cfr10I RCCGGY 5 cut(s) 17, 50, 83, 150, 474
Cfr13I GGNCC 9 cut(s) 118, 153, 160, 161, 186, 194, 195, 213, 385
CseI GACGC 1 cut(s) 535
Csp6I GTAC 1 cut(s) 562
CviAII CATG 2 cut(s) 157, 265
CviQI GTAC 1 cut(s) 562
DdeI CTNAG 2 cut(s) 10, 422
DinI GGCGCC 1 cut(s) 22
DpnI GATC 2 cut(s) 590, 606
DpnII GATC 2 cut(s) 588, 604
DrdI GACNNNNNNGTC 1 cut(s) 757
DseDI GACNNNNNNGTC 1 cut(s) 757
EaeI YGGCCR 1 cut(s) 579
EciI GGCGGA 1 cut(s) 290
Ecl136II GAGCTC 1 cut(s) 370
Eco130I CCWWGG 2 cut(s) 156, 582
Eco147I AGGCCT 2 cut(s) 449, 679
Eco24I GRGCYC 3 cut(s) 164, 198, 372
Eco47I GGWCC 1 cut(s) 385
Eco53kI GAGCTC 1 cut(s) 370
Eco88I CYCGRG 1 cut(s) 314
Eco91I GGTNACC 1 cut(s) 46
EcoICRI GAGCTC 1 cut(s) 370
EcoO109I RGGNCCY 1 cut(s) 385
EcoO65I GGTNACC 1 cut(s) 46
EcoRII CCWGG 3 cut(s) 287, 380, 444
EcoT14I CCWWGG 2 cut(s) 156, 582
EcoT38I GRGCYC 3 cut(s) 164, 198, 372
EgeI GGCGCC 1 cut(s) 22
EheI GGCGCC 1 cut(s) 22
ErhI CCWWGG 2 cut(s) 156, 582
FaeI CATG 2 cut(s) 160, 268
FaiI YATR 2 cut(s) 158, 266
FaqI GGGAC 4 cut(s) 253, 398, 751, 757
FatI CATG 2 cut(s) 156, 264
FauI CCCGC 3 cut(s) 314, 354, 684
Fnu4HI GCNGC 6 cut(s) 15, 81, 96, 128, 229, 243
FokI GGATG 1 cut(s) 428
FriOI GRGCYC 3 cut(s) 164, 198, 372
Fsp4HI GCNGC 6 cut(s) 15, 81, 96, 128, 229, 243
FspBI CTAG 1 cut(s) 629
GlaI GCGC 1 cut(s) 22
GluI GCNGC 6 cut(s) 15, 81, 96, 128, 229, 243
GsaI CCCAGC 1 cut(s) 95
GsuI CTGGAG 1 cut(s) 681
HaeII RGCGCY 1 cut(s) 24
HapII CCGG 7 cut(s) 18, 51, 84, 99, 151, 322, 475
HgaI GACGC 1 cut(s) 535
HhaI GCGC 1 cut(s) 23
Hin1I GRCGYC 2 cut(s) 21, 488
Hin1II CATG 2 cut(s) 160, 268
Hin6I GCGC 1 cut(s) 21
HinP1I GCGC 1 cut(s) 21
HincII GTYRAC 1 cut(s) 778
HindII GTYRAC 1 cut(s) 778
HinfI GANTC 1 cut(s) 329
HpaII CCGG 7 cut(s) 18, 51, 84, 99, 151, 322, 475
HphI GGTGA 4 cut(s) 58, 364, 382, 628
Hpy166II GTNNAC 1 cut(s) 778
Hpy188I TCNGA 3 cut(s) 367, 425, 595
Hpy188III TCNNGA 1 cut(s) 660
Hpy8I GTNNAC 1 cut(s) 778
Hpy99I CGWCG 6 cut(s) 470, 490, 493, 553, 569, 599
HpyCH4III ACNGT 2 cut(s) 46, 553
HpyCH4IV ACGT 5 cut(s) 114, 488, 564, 576, 780
HpyCH4V TGCA 1 cut(s) 296
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 20, 101, 193, 202, 211, 248, 257, 293
HpyF3I CTNAG 2 cut(s) 10, 422
HpySE526I ACGT 5 cut(s) 114, 488, 564, 576, 780
Hsp92I GRCGYC 2 cut(s) 21, 488
Hsp92II CATG 2 cut(s) 160, 268
HspAI GCGC 1 cut(s) 21
KasI GGCGCC 1 cut(s) 20
KroI GCCGGC 2 cut(s) 17, 83
KroNI GCCGGC 2 cut(s) 19, 85
Kzo9I GATC 2 cut(s) 588, 604
LmnI GCTCC 2 cut(s) 101, 368
Lsp1109I GCAGC 1 cut(s) 92
LweI GCATC 1 cut(s) 450
MaeI CTAG 1 cut(s) 629
MaeII ACGT 5 cut(s) 114, 488, 564, 576, 780
MaeIII GTNAC 2 cut(s) 35, 46
MalI GATC 2 cut(s) 590, 606
MbiI CCGCTC 1 cut(s) 349
MboI GATC 2 cut(s) 588, 604
MboII GAAGA 6 cut(s) 247, 268, 271, 334, 688, 742
MflI RGATCY 1 cut(s) 588
MhlI GDGCHC 3 cut(s) 164, 198, 372
MlsI TGGCCA 1 cut(s) 581
MluCI AATT 3 cut(s) 74, 426, 571
MluI ACGCGT 1 cut(s) 527
MluNI TGGCCA 1 cut(s) 581
Mly113I GGCGCC 1 cut(s) 21
MmeI TCCRAC 1 cut(s) 618
Mox20I TGGCCA 1 cut(s) 581
MroNI GCCGGC 2 cut(s) 17, 83
MscI TGGCCA 1 cut(s) 581
Msp20I TGGCCA 1 cut(s) 581
MspA1I CMGCKG 1 cut(s) 14
MspI CCGG 7 cut(s) 18, 51, 84, 99, 151, 322, 475
MspR9I CCNGG 4 cut(s) 289, 323, 382, 446
MvaI CCWGG 3 cut(s) 289, 382, 446
MvnI CGCG 2 cut(s) 529, 684
MwoI GCNNNNNNNGC 9 cut(s) 11, 20, 101, 193, 202, 211, 248, 257, 293
NaeI GCCGGC 2 cut(s) 19, 85
NarI GGCGCC 1 cut(s) 21
NciI CCSGG 1 cut(s) 323
NcoI CCATGG 1 cut(s) 156
NdeII GATC 2 cut(s) 588, 604
NgoMIV GCCGGC 2 cut(s) 17, 83
NlaIII CATG 2 cut(s) 160, 268
NlaIV GGNNCC 8 cut(s) 22, 103, 120, 162, 196, 364, 386, 521
NmeAIII GCCGAG 1 cut(s) 163
NmuCI GTSAC 1 cut(s) 46
PceI AGGCCT 2 cut(s) 449, 679
PcsI WCGNNNNNNNCGW 1 cut(s) 573
PdiI GCCGGC 2 cut(s) 19, 85
PfeI GAWTC 1 cut(s) 329
PkrI GCNGC 6 cut(s) 16, 82, 97, 129, 230, 244
PluTI GGCGCC 1 cut(s) 24
Ppu21I YACGTR 2 cut(s) 115, 577
PpuMI RGGWCCY 1 cut(s) 385
PshAI GACNNNNGTC 1 cut(s) 530
Psp124BI GAGCTC 1 cut(s) 372
Psp5II RGGWCCY 1 cut(s) 385
Psp6I CCWGG 3 cut(s) 287, 380, 444
PspEI GGTNACC 1 cut(s) 46
PspFI CCCAGC 1 cut(s) 91
PspGI CCWGG 3 cut(s) 287, 380, 444
PspN4I GGNNCC 8 cut(s) 22, 103, 120, 162, 196, 364, 386, 521
PspOMI GGGCCC 2 cut(s) 160, 194
PspPI GGNCC 9 cut(s) 118, 153, 160, 161, 186, 194, 195, 213, 385
PspPPI RGGWCCY 1 cut(s) 385
PsuI RGATCY 1 cut(s) 588
PvuII CAGCTG 1 cut(s) 14
RsaI GTAC 1 cut(s) 563
RsaNI GTAC 1 cut(s) 562
SacI GAGCTC 1 cut(s) 372
SatI GCNGC 6 cut(s) 15, 81, 96, 128, 229, 243
Sau3AI GATC 2 cut(s) 588, 604
Sau96I GGNCC 9 cut(s) 118, 153, 160, 161, 186, 194, 195, 213, 385
ScrFI CCNGG 4 cut(s) 289, 323, 382, 446
SduI GDGCHC 3 cut(s) 164, 198, 372
SfaNI GCATC 1 cut(s) 450
SfiI GGCCNNNNNGGCC 1 cut(s) 193
SfoI GGCGCC 1 cut(s) 22
SinI GGWCC 1 cut(s) 385
Sse9I AATT 3 cut(s) 74, 426, 571
SseBI AGGCCT 2 cut(s) 449, 679
SspDI GGCGCC 1 cut(s) 20
SspMI CTAG 1 cut(s) 629
SstI GAGCTC 1 cut(s) 372
StuI AGGCCT 2 cut(s) 449, 679
StyD4I CCNGG 4 cut(s) 287, 321, 380, 444
StyI CCWWGG 2 cut(s) 156, 582
TaaI ACNGT 2 cut(s) 46, 553
TaiI ACGT 5 cut(s) 117, 491, 567, 579, 783
TaqI TCGA 3 cut(s) 327, 674, 711
TasI AATT 3 cut(s) 74, 426, 571
TauI GCSGC 4 cut(s) 98, 130, 231, 245
TfiI GAWTC 1 cut(s) 329
TscAI CASTG 2 cut(s) 196, 364
TseFI GTSAC 1 cut(s) 46
TseI GCWGC 2 cut(s) 14, 80
Tsp45I GTSAC 1 cut(s) 46
TspDTI ATGAA 1 cut(s) 271
TspGWI ACGGA 2 cut(s) 328, 756
TspRI CASTG 2 cut(s) 196, 364
VpaK11BI GGWCC 1 cut(s) 385
XapI RAATTY 1 cut(s) 426
XspI CTAG 1 cut(s) 629
ZraI GACGTC 1 cut(s) 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.