Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001678

Physical Location & Seq

Genomic Coordinates Reverse (-)

15834507 .. 15837352

Gene Structure 2846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G139700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1146 bp

ATGCTGCGCTCGTGCTGCAGGCCGCTTGAGCGCTGCTTCGGATTGCGATGTGGTGCTGGAGGAGGTGGCGATGGGCTTTGGCATATGGACTTGAAGCCCCACGCCTCCGGTGACTACTCGATCGCTGTGGTTCAGGCCAATTCGAATTTGGAAGATCAGGGTCAGGTCTTCACCTCTCCCTCTGCGACCTATGTTGGTATTTATGACGGCCATGGCGGCCCTGAAGCTTCTAGATTCGTCAACAACCACCTCTTTCCTTATTTACACAAATTTGCCACGGAGCAAGGTGGGTTATCGCCGGATGTGATTAAGAAGGCGTTCAGCGCCACTGAGGATGAGTTTTTGCGTCTGGTGAAGCGATCTTTGCCGGTGATGCCGCAAATTGCTTCGGTAGGGTCGTGTTGCCTTGTGGGTGCGATATCGGATGATGTTTTGTATGTGGCCAATCTCGGGGACTCCAGAGCAGTCCTTGGCCGGAGAGTTTCGGAGAGTAAGAGGAGTGCGGTGGTGGCAGAACGCTTGTCCACTGACCACAATGTAGGAGATGAGCAGGTCAGGAAGGAGGTCGAAGCACTCCATCCAGATGATGCGCATGTGGTGGTGTATACTCGTGGGGTTTGGAGAATAAAGGGCATAATTCAGGTGTCAAGATCTATTGGGGATGTTTATCTAAAGAAGCCTGAGTTCAACAGAGACCCAATATACCAGCAATTTCTGAATCCCGTTCCTATGAAGCGGCCAGTGATGACAGCAGAGCCGTCAATCATTACTAGGAACCTTAAGCCACAGGATTCATTTTTGATATTTGCATCAGATGGCCTCTGGGAACAGTTGAGTGATGAAGCAGCAGTAGAAATTGTTTTCAAAAACCCTAGAGCTGGTATTGCAAAGAGATTAGTAAGGGCTGCTCTTCATGAGGCTGCAAAGAAGAGGGAGATGAGATATGATGACATAAAGAAAATTGAAAAGGGCGTAAGGCGTCACTTCCATGATGACATCACTGTCATTGTAGTCTATCTTGATCACCACAAAAGCTCCTCGAAGCATAAAATTAAGCACAGTACTCTTGGCTCCACCAGAGCACCTGTTGATATTTTCTCGGTTAGTGCAGATGATGCAGAACAGGGTCTGCATCACATCGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C

Protein Analysis

382

Amino Acids

42.27

Weight (kDa)

8.42

Isoelectric Point (pI)

47.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001678)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33920 AT4G33920 AT4G33920
fragaria_vesca	FvH4_1g17120 FvH4_1g17120 FvH4_2g04560 FvH4_2g04560 FvH4_2g04560 FvH4_2g04560
malus_domestica	MD02G1181600.v1.1 MD05G1095000.v1.1 MD07G1193800.v1.1 MD09G1197700.v1.1 MD10G1102000.v1.1 MD15G1292500.v1.1
prunus_persica	Prupe.6G224900_v2.0.a1 Prupe.8G139700_v2.0.a1
pyrus_communis	pycom02g14740 pycom05g09390 pycom10g08770 pycom15g25550
rosa_chinensis	RchiOBHm_Chr2g0107291 RchiOBHm_Chr6g0254141
rosa_laevigata	RLG00000003413 RLG00000014940 RLG00000017568
rosa_multiflora	Rmu_co8069786.1_g000001 Rmu_sc0000010.1_g000028 Rmu_sc0003711.1_g000001 Rmu_sc0006416.1_g000004
rosa_roxburghii	Rroxscaffold_2G00136460 Rroxscaffold_5G00349630 Rroxscaffold_7G00211130
rosa_rugosa	Rorug02G0036100 Rorug02G0141400 Rorug02G0141500 Rorug02G0381600 Rorug04G0161000 Rorug05G0094200 Rorug05G0550000 Rorug07G0100900
rosa_samantha	Rh2CG197700 Rh6AG066500 Rh6BG059600 Rh6CG059300 Rh6CG524200 Rh6DG056200
rosa_wichuraiana	Rw2G015230 Rw6G005840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1001
Acc16I	TGCGCA	1 cut(s)	591
Acc36I	ACCTGC	1 cut(s)	541
AccI	GTMKAC	1 cut(s)	605
AciI	CCGC	5 cut(s)	23, 216, 377, 503, 736
AcoI	YGGCCR	4 cut(s)	208, 441, 472, 737
AcsI	RAATTY	2 cut(s)	145, 269
AcuI	CTGAAG	1 cut(s)	243
AcyI	GRCGYC	1 cut(s)	979
AfaI	GTAC	1 cut(s)	1063
AfeI	AGCGCT	1 cut(s)	32
AfiI	CCNNNNNNNGG	2 cut(s)	450, 878
AflII	CTTAAG	1 cut(s)	779
AgsI	TTSAA	4 cut(s)	94, 688, 865, 965
AluBI	AGCT	3 cut(s)	227, 878, 1035
AluI	AGCT	3 cut(s)	227, 878, 1035
Alw21I	GWGCWC	1 cut(s)	1084
Alw26I	GTCTC	1 cut(s)	687
AlwNI	CAGNNNCTG	1 cut(s)	1129
Ama87I	CYCGRG	1 cut(s)	449
Aor51HI	AGCGCT	1 cut(s)	32
AoxI	GGCC	8 cut(s)	20, 135, 208, 217, 441, 472, 737, 817
ApeKI	GCWGC	6 cut(s)	4, 15, 33, 845, 905, 920
ApoI	RAATTY	2 cut(s)	145, 269
Asp700I	GAANNNNTTC	1 cut(s)	317
AspLEI	GCGC	4 cut(s)	9, 33, 326, 592
AspS9I	GGNCC	1 cut(s)	218
AsuHPI	GGTGA	5 cut(s)	122, 163, 364, 382, 1016
AsuII	TTCGAA	1 cut(s)	143
AvaI	CYCGRG	1 cut(s)	449
BalI	TGGCCA	1 cut(s)	443
BauI	CACGAG	2 cut(s)	10, 609
BbsI	GAAGAC	1 cut(s)	160
Bbv12I	GWGCWC	1 cut(s)	1084
BbvI	GCAGC	5 cut(s)	2, 20, 857, 892, 907
BccI	CCATC	3 cut(s)	65, 585, 809
BceAI	ACGGC	2 cut(s)	223, 742
BclI	TGATCA	1 cut(s)	1021
BcoDI	GTCTC	1 cut(s)	687
BfaI	CTAG	3 cut(s)	231, 771, 873
BfmI	CTRYAG	1 cut(s)	16
BfoI	RGCGCY	2 cut(s)	34, 327
BfrI	CTTAAG	1 cut(s)	779
BfuAI	ACCTGC	1 cut(s)	541
BglI	GCCNNNNNGGC	1 cut(s)	216
BglII	AGATCT	1 cut(s)	650
BmcAI	AGTACT	1 cut(s)	1063
BmeT110I	CYCGRG	1 cut(s)	449
BmgT120I	GGNCC	1 cut(s)	218
BmiI	GGNNCC	2 cut(s)	776, 1072
BmsI	GCATC	5 cut(s)	363, 577, 818, 1105, 1141
BpiI	GAAGAC	1 cut(s)	160
BpmI	CTGGAG	2 cut(s)	78, 442
Bpu14I	TTCGAA	1 cut(s)	143
BpuEI	CTTGAG	1 cut(s)	47
BsaBI	GATNNNNATC	1 cut(s)	666
BsaHI	GRCGYC	1 cut(s)	979
BsaI	GGTCTC	1 cut(s)	687
BsaJI	CCNNGG	3 cut(s)	211, 276, 469
BsaWI	WCCGGW	1 cut(s)	107
BsaXI	ACNNNNNCTCC	2 cut(s)	1019, 1049
Bsc4I	CCNNNNNNNGG	2 cut(s)	450, 878
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	1 cut(s)	740
Bse8I	GATNNNNATC	1 cut(s)	666
BseDI	CCNNGG	3 cut(s)	211, 276, 469
BseGI	GGATG	5 cut(s)	307, 340, 430, 577, 667
BseJI	GATNNNNATC	1 cut(s)	666
BseLI	CCNNNNNNNGG	2 cut(s)	450, 878
BseMII	CTCAG	2 cut(s)	321, 672
BseNI	ACTGG	1 cut(s)	740
BseRI	GAGGAG	3 cut(s)	75, 511, 1027
BseXI	GCAGC	5 cut(s)	2, 20, 857, 892, 907
BsgI	GTGCAG	1 cut(s)	1128
Bsh1285I	CGRYCG	1 cut(s)	123
BshFI	GGCC	8 cut(s)	22, 137, 210, 219, 443, 474, 739, 819
BsiEI	CGRYCG	1 cut(s)	123
BsiHKAI	GWGCWC	1 cut(s)	1084
BsiHKCI	CYCGRG	1 cut(s)	449
BsiSI	CCGG	4 cut(s)	108, 299, 368, 475
BslFI	GGGAC	1 cut(s)	467
BslI	CCNNNNNNNGG	2 cut(s)	450, 878
BsmAI	GTCTC	1 cut(s)	687
BsmFI	GGGAC	1 cut(s)	467
BsnI	GGCC	8 cut(s)	22, 137, 210, 219, 443, 474, 739, 819
Bso31I	GGTCTC	1 cut(s)	687
BsoBI	CYCGRG	1 cut(s)	449
Bsp119I	TTCGAA	1 cut(s)	143
Bsp1286I	GDGCHC	1 cut(s)	1084
Bsp143I	GATC	5 cut(s)	120, 154, 359, 650, 1021
Bsp19I	CCATGG	1 cut(s)	211
BspACI	CCGC	5 cut(s)	23, 216, 377, 503, 736
BspANI	GGCC	8 cut(s)	22, 137, 210, 219, 443, 474, 739, 819
BspCNI	CTCAG	2 cut(s)	322, 673
BspHI	TCATGA	1 cut(s)	913
BspLI	GGNNCC	2 cut(s)	776, 1072
BspMAI	CTGCAG	1 cut(s)	20
BspMI	ACCTGC	1 cut(s)	541
BspQI	GCTCTTC	1 cut(s)	915
BspT104I	TTCGAA	1 cut(s)	143
BspTI	CTTAAG	1 cut(s)	779
BspTNI	GGTCTC	1 cut(s)	687
BsrFI	RCCGGY	1 cut(s)	367
BsrI	ACTGG	1 cut(s)	740
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	3 cut(s)	211, 276, 469
BssMI	GATC	5 cut(s)	120, 154, 359, 650, 1021
BssNAI	GTATAC	1 cut(s)	606
BssNI	GRCGYC	1 cut(s)	979
BssSI	CACGAG	2 cut(s)	10, 609
BssT1I	CCWWGG	2 cut(s)	211, 469
Bst1107I	GTATAC	1 cut(s)	606
Bst2BI	CACGAG	2 cut(s)	10, 609
Bst4CI	ACNGT	3 cut(s)	831, 1003, 1061
Bst6I	CTCTTC	2 cut(s)	915, 923
BstACI	GRCGYC	1 cut(s)	979
BstAFI	CTTAAG	1 cut(s)	779
BstAPI	GCANNNNNTGC	1 cut(s)	1115
BstBI	TTCGAA	1 cut(s)	143
BstC8I	GCNNGC	1 cut(s)	20
BstDEI	CTNAG	2 cut(s)	330, 681
BstDSI	CCRYGG	2 cut(s)	211, 276
BstF5I	GGATG	5 cut(s)	307, 340, 430, 577, 667
BstH2I	RGCGCY	2 cut(s)	34, 327
BstHHI	GCGC	4 cut(s)	9, 33, 326, 592
BstKTI	GATC	5 cut(s)	123, 157, 362, 653, 1024
BstMAI	GTCTC	1 cut(s)	687
BstMBI	GATC	5 cut(s)	120, 154, 359, 650, 1021
BstMCI	CGRYCG	1 cut(s)	123
BstMWI	GCNNNNNNNGC	9 cut(s)	15, 28, 216, 323, 364, 373, 509, 884, 1115
BstNSI	RCATGY	1 cut(s)	596
BstSFI	CTRYAG	1 cut(s)	16
BstV1I	GCAGC	5 cut(s)	2, 20, 857, 892, 907
BstV2I	GAAGAC	1 cut(s)	160
BstX2I	RGATCY	1 cut(s)	650
BstYI	RGATCY	1 cut(s)	650
BstZ17I	GTATAC	1 cut(s)	606
BsuRI	GGCC	8 cut(s)	22, 137, 210, 219, 443, 474, 739, 819
BtgI	CCRYGG	2 cut(s)	211, 276
BtgZI	GCGATG	2 cut(s)	61, 84
BtsCI	GGATG	5 cut(s)	307, 340, 430, 577, 667
BtsIMutI	CAGTG	4 cut(s)	327, 525, 747, 999
BveI	ACCTGC	1 cut(s)	541
Cac8I	GCNNGC	1 cut(s)	20
CaiI	CAGNNNCTG	1 cut(s)	1129
CciI	TCATGA	1 cut(s)	913
CfoI	GCGC	4 cut(s)	9, 33, 326, 592
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	1 cut(s)	218
CseI	GACGC	2 cut(s)	335, 968
Csp6I	GTAC	1 cut(s)	1062
CviAII	CATG	4 cut(s)	212, 593, 914, 989
CviQI	GTAC	1 cut(s)	1062
DdeI	CTNAG	2 cut(s)	330, 681
DpnI	GATC	5 cut(s)	122, 156, 361, 652, 1023
DpnII	GATC	5 cut(s)	120, 154, 359, 650, 1021
DrdI	GACNNNNNNGTC	1 cut(s)	1001
DseDI	GACNNNNNNGTC	1 cut(s)	1001
EaeI	YGGCCR	4 cut(s)	208, 441, 472, 737
Eam1104I	CTCTTC	2 cut(s)	915, 923
EarI	CTCTTC	2 cut(s)	915, 923
Eco130I	CCWWGG	2 cut(s)	211, 469
Eco31I	GGTCTC	1 cut(s)	687
Eco32I	GATATC	1 cut(s)	420
Eco47III	AGCGCT	1 cut(s)	32
Eco57I	CTGAAG	1 cut(s)	243
Eco88I	CYCGRG	1 cut(s)	449
EcoRV	GATATC	1 cut(s)	420
EcoT14I	CCWWGG	2 cut(s)	211, 469
ErhI	CCWWGG	2 cut(s)	211, 469
FaeI	CATG	4 cut(s)	215, 596, 917, 992
FaqI	GGGAC	1 cut(s)	467
FatI	CATG	4 cut(s)	211, 592, 913, 988
FauNDI	CATATG	1 cut(s)	84
FbaI	TGATCA	1 cut(s)	1021
FblI	GTMKAC	1 cut(s)	605
FokI	GGATG	5 cut(s)	314, 347, 437, 564, 674
FspAI	RTGCGCAY	1 cut(s)	591
FspBI	CTAG	3 cut(s)	231, 771, 873
FspI	TGCGCA	1 cut(s)	591
GlaI	GCGC	4 cut(s)	8, 32, 325, 591
GsuI	CTGGAG	2 cut(s)	78, 442
HaeII	RGCGCY	2 cut(s)	34, 327
HaeIII	GGCC	8 cut(s)	22, 137, 210, 219, 443, 474, 739, 819
HapII	CCGG	4 cut(s)	108, 299, 368, 475
HgaI	GACGC	2 cut(s)	335, 968
HhaI	GCGC	4 cut(s)	9, 33, 326, 592
Hin1I	GRCGYC	1 cut(s)	979
Hin1II	CATG	4 cut(s)	215, 596, 917, 992
Hin6I	GCGC	4 cut(s)	7, 31, 324, 590
HinP1I	GCGC	4 cut(s)	7, 31, 324, 590
HincII	GTYRAC	1 cut(s)	241
HindII	GTYRAC	1 cut(s)	241
HindIII	AAGCTT	1 cut(s)	225
HinfI	GANTC	4 cut(s)	234, 455, 718, 791
HpaII	CCGG	4 cut(s)	108, 299, 368, 475
HphI	GGTGA	5 cut(s)	122, 163, 364, 382, 1016
Hpy166II	GTNNAC	3 cut(s)	241, 525, 606
Hpy188I	TCNGA	5 cut(s)	41, 424, 487, 717, 814
Hpy188III	TCNNGA	7 cut(s)	231, 459, 556, 581, 648, 914, 1019
Hpy8I	GTNNAC	3 cut(s)	241, 525, 606
HpyAV	CCTTC	2 cut(s)	307, 553
HpyCH4III	ACNGT	3 cut(s)	831, 1003, 1061
HpyCH4V	TGCA	7 cut(s)	18, 809, 887, 923, 1109, 1118, 1132
HpyF10VI	GCNNNNNNNGC	9 cut(s)	15, 28, 216, 323, 364, 373, 509, 884, 1115
HpyF3I	CTNAG	2 cut(s)	330, 681
Hsp92I	GRCGYC	1 cut(s)	979
Hsp92II	CATG	4 cut(s)	215, 596, 917, 992
HspAI	GCGC	4 cut(s)	7, 31, 324, 590
Ksp22I	TGATCA	1 cut(s)	1021
Kzo9I	GATC	5 cut(s)	120, 154, 359, 650, 1021
LguI	GCTCTTC	1 cut(s)	915
LmnI	GCTCC	3 cut(s)	280, 1040, 1076
Lsp1109I	GCAGC	5 cut(s)	2, 20, 857, 892, 907
LweI	GCATC	5 cut(s)	363, 577, 818, 1105, 1141
MaeI	CTAG	3 cut(s)	231, 771, 873
MaeIII	GTNAC	2 cut(s)	110, 980
MalI	GATC	5 cut(s)	122, 156, 361, 652, 1023
MboI	GATC	5 cut(s)	120, 154, 359, 650, 1021
MboII	GAAGA	4 cut(s)	160, 164, 902, 940
MflI	RGATCY	1 cut(s)	650
MhlI	GDGCHC	1 cut(s)	1084
MlsI	TGGCCA	1 cut(s)	443
MluCI	AATT	9 cut(s)	139, 145, 269, 381, 636, 710, 855, 960, 1050
MluNI	TGGCCA	1 cut(s)	443
MlyI	GAGTC	1 cut(s)	449
Mox20I	TGGCCA	1 cut(s)	443
MroXI	GAANNNNTTC	1 cut(s)	317
MscI	TGGCCA	1 cut(s)	443
MseI	TTAA	3 cut(s)	309, 780, 1053
MslI	CAYNNNNRTG	2 cut(s)	582, 987
Msp20I	TGGCCA	1 cut(s)	443
MspCI	CTTAAG	1 cut(s)	779
MspI	CCGG	4 cut(s)	108, 299, 368, 475
MwoI	GCNNNNNNNGC	9 cut(s)	15, 28, 216, 323, 364, 373, 509, 884, 1115
NcoI	CCATGG	1 cut(s)	211
NdeI	CATATG	1 cut(s)	84
NdeII	GATC	5 cut(s)	120, 154, 359, 650, 1021
NlaIII	CATG	4 cut(s)	215, 596, 917, 992
NlaIV	GGNNCC	2 cut(s)	776, 1072
NmuCI	GTSAC	2 cut(s)	110, 980
NsbI	TGCGCA	1 cut(s)	591
NspI	RCATGY	1 cut(s)	596
NspV	TTCGAA	1 cut(s)	143
PagI	TCATGA	1 cut(s)	913
PciSI	GCTCTTC	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	1 cut(s)	395
PdmI	GAANNNNTTC	1 cut(s)	317
PfeI	GAWTC	3 cut(s)	234, 718, 791
Ple19I	CGATCG	1 cut(s)	123
PleI	GAGTC	1 cut(s)	449
PpsI	GAGTC	1 cut(s)	449
PspN4I	GGNNCC	2 cut(s)	776, 1072
PspPI	GGNCC	1 cut(s)	218
PstI	CTGCAG	1 cut(s)	20
PstNI	CAGNNNCTG	1 cut(s)	1129
PsuI	RGATCY	1 cut(s)	650
PvuI	CGATCG	1 cut(s)	123
RsaI	GTAC	1 cut(s)	1063
RsaNI	GTAC	1 cut(s)	1062
RseI	CAYNNNNRTG	2 cut(s)	582, 987
SapI	GCTCTTC	1 cut(s)	915
SaqAI	TTAA	3 cut(s)	309, 780, 1053
Sau3AI	GATC	5 cut(s)	120, 154, 359, 650, 1021
Sau96I	GGNCC	1 cut(s)	218
ScaI	AGTACT	1 cut(s)	1063
SchI	GAGTC	1 cut(s)	449
SduI	GDGCHC	1 cut(s)	1084
SfaNI	GCATC	5 cut(s)	363, 577, 818, 1105, 1141
SfcI	CTRYAG	1 cut(s)	16
SfiI	GGCCNNNNNGGCC	1 cut(s)	216
SfuI	TTCGAA	1 cut(s)	143
SmiMI	CAYNNNNRTG	2 cut(s)	582, 987
SmlI	CTYRAG	2 cut(s)	26, 779
SmoI	CTYRAG	2 cut(s)	26, 779
Sse9I	AATT	9 cut(s)	139, 145, 269, 381, 636, 710, 855, 960, 1050
SsiI	CCGC	5 cut(s)	23, 216, 377, 503, 736
SspMI	CTAG	3 cut(s)	231, 771, 873
StyI	CCWWGG	2 cut(s)	211, 469
TaaI	ACNGT	3 cut(s)	831, 1003, 1061
TaqI	TCGA	4 cut(s)	119, 143, 567, 1040
TasI	AATT	9 cut(s)	139, 145, 269, 381, 636, 710, 855, 960, 1050
TatI	WGTACW	1 cut(s)	1061
TauI	GCSGC	4 cut(s)	25, 219, 379, 739
TfiI	GAWTC	3 cut(s)	234, 718, 791
Tru1I	TTAA	3 cut(s)	309, 780, 1053
Tru9I	TTAA	3 cut(s)	309, 780, 1053
TscAI	CASTG	4 cut(s)	334, 532, 747, 1006
TseFI	GTSAC	2 cut(s)	110, 980
TseI	GCWGC	6 cut(s)	4, 15, 33, 845, 905, 920
Tsp45I	GTSAC	2 cut(s)	110, 980
TspDTI	ATGAA	4 cut(s)	746, 783, 855, 902
TspGWI	ACGGA	1 cut(s)	293
TspRI	CASTG	4 cut(s)	334, 532, 747, 1006
Vha464I	CTTAAG	1 cut(s)	779
XapI	RAATTY	2 cut(s)	145, 269
XbaI	TCTAGA	1 cut(s)	230
XceI	RCATGY	1 cut(s)	596
XcmI	CCANNNNNNNNNTGG	1 cut(s)	145
XmiI	GTMKAC	1 cut(s)	605
XmnI	GAANNNNTTC	1 cut(s)	317
XspI	CTAG	3 cut(s)	231, 771, 873
ZrmI	AGTACT	1 cut(s)	1063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.