pycom04g18130
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
20274611 .. 20275946
1336 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 579 bp
ATGTTTCCCCAAAAGTGCAAGGACGTCGTTCCAAATCACGACTCCAAGCCCTCTTCGACCTCTGACGCAGATTCTGATTTGATTGGTGAGAGTAGCACGTCGAACGGAACTCAAGAAGGTTCTCCATGTCAAATGGTCCTTCCAGTTTTGCAGAAGATCGACTTGAAGAGAGAGCATACTGCCTTGTCTGATGAAGTCAAGCTCACTACGAATTCCTCGAGTGAACCTTTTGTTTTAATCACTCACAATTATTTTCTAACTTTCCTTCCTCTCTTTGACTTTTTCTGCAGATTTGGACCTATGAATCAAACTGAAATTTCAAGCCGATCAGGTTCCGTTGTTGGATTGGAATCCTCCCTAGACAATGGGTTGCAGGTCATTTGTTCTGACTCCTCTAAAAAGCAGTTCAAGTTTGACCATGTCTTCAGACCTGAGGGCAACCAAGAACTTTGTATCATTCTTGCTGAACTTTTCAAATGTGCAGAGGCTGTTTTCGCTCAAACGAGACCTATTGTGAGTTCAGTGTTGGATGGCTACAATGTCTGCATTTTTGCCTATGGACAAACTGGAACTGGCTAG

Protein Analysis

193

Amino Acids

21.08

Weight (kDa)

4.91

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 97 - 192 2.6e-14 Kinesin motor domain
Microtub_bd PF16796 127 - 192 2.9e-09 Microtubule binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 27
Acc36I ACCTGC 1 cut(s) 364
AcsI RAATTY 2 cut(s) 211, 315
AcuI CTGAAG 1 cut(s) 409
AcyI GRCGYC 1 cut(s) 24
AgsI TTSAA 4 cut(s) 166, 321, 409, 475
AjiI CACGTC 1 cut(s) 99
AluBI AGCT 1 cut(s) 202
AluI AGCT 1 cut(s) 202
Alw26I GTCTC 1 cut(s) 499
AlwNI CAGNNNCTG 2 cut(s) 74, 488
Ama87I CYCGRG 1 cut(s) 217
ApoI RAATTY 2 cut(s) 211, 315
AspS9I GGNCC 2 cut(s) 136, 296
AsuHPI GGTGA 1 cut(s) 98
AvaI CYCGRG 1 cut(s) 217
AvaII GGWCC 2 cut(s) 136, 296
AxyI CCTNAGG 1 cut(s) 432
BbsI GAAGAC 1 cut(s) 415
BccI CCATC 1 cut(s) 524
BcgI CGANNNNNNTGC 2 cut(s) 7, 41
BcoDI GTCTC 1 cut(s) 499
BfaI CTAG 2 cut(s) 359, 577
BfmI CTRYAG 1 cut(s) 286
BfuAI ACCTGC 1 cut(s) 364
Bme18I GGWCC 2 cut(s) 136, 296
BmeT110I CYCGRG 1 cut(s) 217
BmgBI CACGTC 1 cut(s) 99
BmgT120I GGNCC 2 cut(s) 136, 296
BmiI GGNNCC 1 cut(s) 334
BpiI GAAGAC 1 cut(s) 415
BpuEI CTTGAG 1 cut(s) 96
BsaBI GATNNNNATC 1 cut(s) 349
BsaHI GRCGYC 1 cut(s) 24
BsaI GGTCTC 1 cut(s) 499
Bse1I ACTGG 3 cut(s) 143, 571, 577
Bse21I CCTNAGG 1 cut(s) 432
Bse8I GATNNNNATC 1 cut(s) 349
BseGI GGATG 1 cut(s) 535
BseJI GATNNNNATC 1 cut(s) 349
BseMII CTCAG 1 cut(s) 423
BseNI ACTGG 3 cut(s) 143, 571, 577
BseRI GAGGAG 1 cut(s) 382
BsgI GTGCAG 1 cut(s) 501
BsiHKCI CYCGRG 1 cut(s) 217
BsmAI GTCTC 1 cut(s) 499
Bso31I GGTCTC 1 cut(s) 499
BsoBI CYCGRG 1 cut(s) 217
Bsp143I GATC 2 cut(s) 156, 326
BspCNI CTCAG 1 cut(s) 424
BspLI GGNNCC 1 cut(s) 334
BspMAI CTGCAG 1 cut(s) 290
BspMI ACCTGC 1 cut(s) 364
BspTNI GGTCTC 1 cut(s) 499
BsrI ACTGG 3 cut(s) 143, 571, 577
BssMI GATC 2 cut(s) 156, 326
BssNI GRCGYC 1 cut(s) 24
Bst6I CTCTTC 2 cut(s) 58, 161
BstACI GRCGYC 1 cut(s) 24
BstDEI CTNAG 1 cut(s) 432
BstF5I GGATG 1 cut(s) 535
BstKTI GATC 2 cut(s) 159, 329
BstMAI GTCTC 1 cut(s) 499
BstMBI GATC 2 cut(s) 156, 326
BstMWI GCNNNNNNNGC 1 cut(s) 494
BstSFI CTRYAG 1 cut(s) 286
BstV2I GAAGAC 1 cut(s) 415
Bsu36I CCTNAGG 1 cut(s) 432
BtrI CACGTC 1 cut(s) 99
BtsCI GGATG 1 cut(s) 535
BtsIMutI CAGTG 1 cut(s) 528
BveI ACCTGC 1 cut(s) 364
CaiI CAGNNNCTG 2 cut(s) 74, 488
Cfr13I GGNCC 2 cut(s) 136, 296
CseI GACGC 1 cut(s) 74
CviAII CATG 2 cut(s) 126, 419
CviJI RGCY 6 cut(s) 49, 202, 324, 488, 534, 576
CviKI_1 RGCY 6 cut(s) 49, 202, 324, 488, 534, 576
DdeI CTNAG 1 cut(s) 432
DpnI GATC 2 cut(s) 158, 328
DpnII GATC 2 cut(s) 156, 326
Eam1104I CTCTTC 2 cut(s) 58, 161
EarI CTCTTC 2 cut(s) 58, 161
Eco31I GGTCTC 1 cut(s) 499
Eco47I GGWCC 2 cut(s) 136, 296
Eco57I CTGAAG 1 cut(s) 409
Eco81I CCTNAGG 1 cut(s) 432
Eco88I CYCGRG 1 cut(s) 217
EcoRI GAATTC 1 cut(s) 211
FaeI CATG 2 cut(s) 129, 422
FaiI YATR 5 cut(s) 127, 177, 302, 420, 558
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FatI CATG 2 cut(s) 125, 418
FokI GGATG 1 cut(s) 542
FspBI CTAG 2 cut(s) 359, 577
HgaI GACGC 1 cut(s) 74
Hin1I GRCGYC 1 cut(s) 24
Hin1II CATG 2 cut(s) 129, 422
HinfI GANTC 5 cut(s) 41, 71, 304, 350, 389
HphI GGTGA 1 cut(s) 98
Hpy166II GTNNAC 1 cut(s) 224
Hpy188I TCNGA 5 cut(s) 64, 76, 190, 388, 428
Hpy188III TCNNGA 2 cut(s) 38, 113
Hpy8I GTNNAC 1 cut(s) 224
Hpy99I CGWCG 2 cut(s) 29, 103
HpyAV CCTTC 3 cut(s) 110, 149, 275
HpyCH4IV ACGT 2 cut(s) 24, 98
HpyCH4V TGCA 6 cut(s) 18, 151, 288, 373, 482, 546
HpyF10VI GCNNNNNNNGC 1 cut(s) 494
HpyF3I CTNAG 1 cut(s) 432
HpySE526I ACGT 2 cut(s) 24, 98
Hsp92I GRCGYC 1 cut(s) 24
Hsp92II CATG 2 cut(s) 129, 422
Kzo9I GATC 2 cut(s) 156, 326
LpnPI CCDG 6 cut(s) 156, 315, 359, 444, 552, 558
MaeI CTAG 2 cut(s) 359, 577
MaeII ACGT 2 cut(s) 24, 98
MalI GATC 2 cut(s) 158, 328
MboI GATC 2 cut(s) 156, 326
MboII GAAGA 4 cut(s) 45, 166, 178, 415
MluCI AATT 3 cut(s) 211, 247, 315
MlyI GAGTC 2 cut(s) 35, 383
MmeI TCCRAC 2 cut(s) 322, 507
MnlI CCTC 8 cut(s) 61, 70, 226, 279, 364, 403, 427, 478
MseI TTAA 1 cut(s) 236
MwoI GCNNNNNNNGC 1 cut(s) 494
NdeII GATC 2 cut(s) 156, 326
NlaIII CATG 2 cut(s) 129, 422
NlaIV GGNNCC 1 cut(s) 334
PaeR7I CTCGAG 1 cut(s) 217
PcsI WCGNNNNNNNCGW 1 cut(s) 215
PfeI GAWTC 3 cut(s) 71, 304, 350
PflFI GACNNNGTC 1 cut(s) 419
PleI GAGTC 2 cut(s) 35, 383
PpsI GAGTC 2 cut(s) 35, 383
PspN4I GGNNCC 1 cut(s) 334
PspPI GGNCC 2 cut(s) 136, 296
PspXI VCTCGAGB 1 cut(s) 217
PstI CTGCAG 1 cut(s) 290
PstNI CAGNNNCTG 2 cut(s) 74, 488
PsyI GACNNNGTC 1 cut(s) 419
SaqAI TTAA 1 cut(s) 236
Sau3AI GATC 2 cut(s) 156, 326
Sau96I GGNCC 2 cut(s) 136, 296
SchI GAGTC 2 cut(s) 35, 383
SfcI CTRYAG 1 cut(s) 286
Sfr274I CTCGAG 1 cut(s) 217
SinI GGWCC 2 cut(s) 136, 296
SlaI CTCGAG 1 cut(s) 217
SmlI CTYRAG 2 cut(s) 111, 217
SmoI CTYRAG 2 cut(s) 111, 217
Sse9I AATT 3 cut(s) 211, 247, 315
SspMI CTAG 2 cut(s) 359, 577
TaiI ACGT 2 cut(s) 27, 101
TaqI TCGA 4 cut(s) 56, 101, 159, 218
TasI AATT 3 cut(s) 211, 247, 315
TfiI GAWTC 3 cut(s) 71, 304, 350
Tru1I TTAA 1 cut(s) 236
Tru9I TTAA 1 cut(s) 236
TscAI CASTG 1 cut(s) 528
TspDTI ATGAA 2 cut(s) 207, 317
TspGWI ACGGA 2 cut(s) 120, 325
TspRI CASTG 1 cut(s) 528
Tth111I GACNNNGTC 1 cut(s) 419
VpaK11BI GGWCC 2 cut(s) 136, 296
XapI RAATTY 2 cut(s) 211, 315
XhoI CTCGAG 1 cut(s) 217
XspI CTAG 2 cut(s) 359, 577
ZraI GACGTC 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.