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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1205200.v1.1 |
| pyrus_communis | pycom03g16180 pycom04g18130 |
| rosa_chinensis | RchiOBHm_Chr2g0147251 |
| rosa_laevigata | RLG00000001747 RLG00000011422 RLG00000027814 |
| rosa_multiflora | Rmu_sc0000239.1_g000021 Rmu_sc0000281.1_g000007 Rmu_sc0012870.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00042640 Rroxscaffold_2G00137820 Rroxscaffold_3G00246700 Rroxscaffold_4G00310320 Rroxscaffold_5G00348420 |
| rosa_rugosa | Rorug01G0187600 Rorug03G0334800 Rorug05G0314300 Rorug05G0314400 Rorug05G0314500 Rorug05G0314600 Rorug06G0126800 |
| rosa_samantha | Rh1CG247300 Rh1DG034400 Rh4CG158400 Rh5AG257400 Rh5AG425700 Rh5BG372700 Rh5BG554500 Rh5BG555000 Rh5CG577300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 13, 28, 31 |
| AcoI | YGGCCR | 2 cut(s) | 58, 109 |
| AfaI | GTAC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 40, 93, 142 |
| AgsI | TTSAA | 2 cut(s) | 141, 159 |
| AoxI | GGCC | 5 cut(s) | 7, 58, 95, 100, 109 |
| AspS9I | GGNCC | 2 cut(s) | 96, 101 |
| AsuC2I | CCSGG | 1 cut(s) | 99 |
| AsuHPI | GGTGA | 1 cut(s) | 172 |
| BaeGI | GKGCMC | 1 cut(s) | 70 |
| BceAI | ACGGC | 2 cut(s) | 22, 73 |
| BcnI | CCSGG | 1 cut(s) | 99 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 108 |
| BisI | GCNGC | 3 cut(s) | 14, 28, 31 |
| BlsI | GCNGC | 3 cut(s) | 15, 29, 32 |
| Bme1390I | CCNGG | 1 cut(s) | 99 |
| BmgT120I | GGNCC | 2 cut(s) | 96, 101 |
| BmrFI | CCNGG | 1 cut(s) | 99 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 188, 220 |
| BpuMI | CCSGG | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 1 cut(s) | 183 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 40, 93, 142 |
| Bse118I | RCCGGY | 1 cut(s) | 111 |
| BseDI | CCNNGG | 1 cut(s) | 183 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 40, 93, 142 |
| BseRI | GAGGAG | 1 cut(s) | 209 |
| BseSI | GKGCMC | 1 cut(s) | 70 |
| BseX3I | CGGCCG | 1 cut(s) | 109 |
| BseYI | CCCAGC | 1 cut(s) | 69 |
| Bsh1285I | CGRYCG | 1 cut(s) | 112 |
| BshFI | GGCC | 5 cut(s) | 9, 60, 97, 102, 111 |
| BsiEI | CGRYCG | 1 cut(s) | 112 |
| BsiSI | CCGG | 2 cut(s) | 99, 112 |
| BslFI | GGGAC | 1 cut(s) | 70 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 40, 93, 142 |
| BsmFI | GGGAC | 1 cut(s) | 70 |
| BsnI | GGCC | 5 cut(s) | 9, 60, 97, 102, 111 |
| Bsp1286I | GDGCHC | 1 cut(s) | 70 |
| BspACI | CCGC | 3 cut(s) | 13, 28, 31 |
| BspANI | GGCC | 5 cut(s) | 9, 60, 97, 102, 111 |
| BsrFI | RCCGGY | 1 cut(s) | 111 |
| BssAI | RCCGGY | 1 cut(s) | 111 |
| BssECI | CCNNGG | 1 cut(s) | 183 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| BstC8I | GCNNGC | 2 cut(s) | 11, 113 |
| BstEII | GGTNACC | 1 cut(s) | 178 |
| BstMCI | CGRYCG | 1 cut(s) | 112 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 108, 208 |
| BstPI | GGTNACC | 1 cut(s) | 178 |
| BstSCI | CCNGG | 1 cut(s) | 97 |
| BstSLI | GKGCMC | 1 cut(s) | 70 |
| BstZI | CGGCCG | 1 cut(s) | 109 |
| BsuRI | GGCC | 5 cut(s) | 9, 60, 97, 102, 111 |
| Cac8I | GCNNGC | 2 cut(s) | 11, 113 |
| Cfr10I | RCCGGY | 1 cut(s) | 111 |
| Cfr13I | GGNCC | 2 cut(s) | 96, 101 |
| Csp6I | GTAC | 1 cut(s) | 4 |
| CviJI | RGCY | 8 cut(s) | 9, 16, 60, 73, 97, 102, 111, 202 |
| CviKI_1 | RGCY | 8 cut(s) | 9, 16, 60, 73, 97, 102, 111, 202 |
| CviQI | GTAC | 1 cut(s) | 4 |
| EaeI | YGGCCR | 2 cut(s) | 58, 109 |
| EagI | CGGCCG | 1 cut(s) | 109 |
| EclXI | CGGCCG | 1 cut(s) | 109 |
| Eco52I | CGGCCG | 1 cut(s) | 109 |
| Eco91I | GGTNACC | 1 cut(s) | 178 |
| EcoO65I | GGTNACC | 1 cut(s) | 178 |
| FaiI | YATR | 2 cut(s) | 51, 78 |
| FaqI | GGGAC | 1 cut(s) | 70 |
| Fnu4HI | GCNGC | 3 cut(s) | 14, 28, 31 |
| Fsp4HI | GCNGC | 3 cut(s) | 14, 28, 31 |
| GluI | GCNGC | 3 cut(s) | 14, 28, 31 |
| GsaI | CCCAGC | 1 cut(s) | 73 |
| HaeIII | GGCC | 5 cut(s) | 9, 60, 97, 102, 111 |
| HapII | CCGG | 2 cut(s) | 99, 112 |
| HpaII | CCGG | 2 cut(s) | 99, 112 |
| HphI | GGTGA | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 1 cut(s) | 43 |
| Hpy99I | CGWCG | 1 cut(s) | 59 |
| HpyAV | CCTTC | 2 cut(s) | 113, 147 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| HpyCH4V | TGCA | 1 cut(s) | 164 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 108, 208 |
| KroI | GCCGGC | 1 cut(s) | 111 |
| KroNI | GCCGGC | 1 cut(s) | 113 |
| LpnPI | CCDG | 4 cut(s) | 23, 83, 112, 125 |
| MaeIII | GTNAC | 2 cut(s) | 145, 178 |
| MboII | GAAGA | 2 cut(s) | 144, 147 |
| MfeI | CAATTG | 1 cut(s) | 159 |
| MhlI | GDGCHC | 1 cut(s) | 70 |
| MluCI | AATT | 1 cut(s) | 159 |
| MnlI | CCTC | 6 cut(s) | 98, 114, 178, 187, 208, 214 |
| MroNI | GCCGGC | 1 cut(s) | 111 |
| MspI | CCGG | 2 cut(s) | 99, 112 |
| MspR9I | CCNGG | 1 cut(s) | 99 |
| MunI | CAATTG | 1 cut(s) | 159 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 108, 208 |
| NaeI | GCCGGC | 1 cut(s) | 113 |
| NciI | CCSGG | 1 cut(s) | 99 |
| NgoMIV | GCCGGC | 1 cut(s) | 111 |
| NmeAIII | GCCGAG | 1 cut(s) | 87 |
| NmuCI | GTSAC | 1 cut(s) | 178 |
| PdiI | GCCGGC | 1 cut(s) | 113 |
| PkrI | GCNGC | 3 cut(s) | 15, 29, 32 |
| PspEI | GGTNACC | 1 cut(s) | 178 |
| PspFI | CCCAGC | 1 cut(s) | 69 |
| PspPI | GGNCC | 2 cut(s) | 96, 101 |
| RsaI | GTAC | 1 cut(s) | 5 |
| RsaNI | GTAC | 1 cut(s) | 4 |
| SatI | GCNGC | 3 cut(s) | 14, 28, 31 |
| Sau96I | GGNCC | 2 cut(s) | 96, 101 |
| ScrFI | CCNGG | 1 cut(s) | 99 |
| SduI | GDGCHC | 1 cut(s) | 70 |
| SetI | ASST | 4 cut(s) | 124, 147, 189, 227 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 108 |
| Sse9I | AATT | 1 cut(s) | 159 |
| SsiI | CCGC | 3 cut(s) | 13, 28, 31 |
| StyD4I | CCNGG | 1 cut(s) | 97 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaqI | TCGA | 2 cut(s) | 131, 206 |
| TaqII | GACCGA | 1 cut(s) | 166 |
| TasI | AATT | 1 cut(s) | 159 |
| TauI | GCSGC | 3 cut(s) | 16, 30, 33 |
| TseFI | GTSAC | 1 cut(s) | 178 |
| Tsp45I | GTSAC | 1 cut(s) | 178 |
| TspDTI | ATGAA | 1 cut(s) | 114 |