Rh4CG158400
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
34815416 .. 34822513
7098 bp
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UTR
Exon/CDS
Intron
Rh4CG158400.1

Sequence Viewer

Length: 840 bp
ATGTTCAAGGATATGCAACGACATCAAAGAAAGCCTATGGAATCAAACCTCCTCAACCCTAACCATTATCATCAAGAAGTCGTCAATGATGTGGAAGTGGAGATTAGGCCACTTGTTATTCTTTCTTCTCAAGAGAAGGCGGAGGATAATACGATAGGCCTGAGCTTAGAAAACATTAAGGAGAATGATCATCACATGTTTGAGCGTAAATTCGATGAGACTATGCATATCGGTATGGTTGTCGGAAACAAAGCCGATTTCAACAGTCCACGACTTATAAGTCTTGATATTGAGGTTGAGAAATGTCAGACAGCCTCTGGCTCTCCCAACGCCGCCACCACCACTCGGACAACTATGACGACTGCCGCCGTGCTCAGCCCTATAATCTGTCCCTCAAAAGGCCCAACCCCTTCAGCTCGGCAAGAAGCAGTTCATCATCGAACCCTTCAAAGGTTTGGCCTCGATCCCAAAGCTCGCGTCTGTCACGGAAACATAAGGGTCTTTTGTAGGTGTAGGCCTCTAAACAGTGAGGAAGTTTCAGCAGGAGCTTCAATGGCTATTGACTTTGAATCTGAGAAAGAATGTGAGCTTGCTGTCAAGTTAAATGGGATTACAAGAAGGACTTTTAAGTTTGATGTAGTTTTCGGCCCTCAAGCAGACCAAGCTGATGTCTTTGAAGACACAGCTCCATTTGCAACCTCAGTTCTAGGTGGGTACAATGTCTGCATATTTGCTTACGGACAAACTGAAAGTGGAAAAACCTTTTCAATGGATGGAACGGAAGAAGCTCGGGGAGTCAATTTTAGGACTCTTGAGCAACTATTTCGGATAATAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

279

Amino Acids

31.23

Weight (kDa)

5.88

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 162 - 278 4.2e-27 Microtubule binding
Kinesin PF00225 170 - 278 1.2e-29 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 278
AasI GACNNNNNNGTC 1 cut(s) 279
AccII CGCG 1 cut(s) 477
AciI CCGC 3 cut(s) 140, 333, 366
AclWI GGATC 1 cut(s) 458
AcsI RAATTY 1 cut(s) 209
AcuI CTGAAG 1 cut(s) 396
AfaI GTAC 1 cut(s) 716
AfiI CCNNNNNNNGG 3 cut(s) 345, 398, 450
AflIII ACRYGT 1 cut(s) 195
AgsI TTSAA 7 cut(s) 7, 262, 449, 552, 569, 677, 768
AluBI AGCT 8 cut(s) 165, 416, 473, 548, 589, 665, 686, 788
AluI AGCT 8 cut(s) 165, 416, 473, 548, 589, 665, 686, 788
Alw21I GWGCWC 1 cut(s) 375
Alw26I GTCTC 1 cut(s) 212
AlwI GGATC 1 cut(s) 458
AlwNI CAGNNNCTG 1 cut(s) 317
Ama87I CYCGRG 1 cut(s) 789
AoxI GGCC 6 cut(s) 107, 157, 400, 457, 515, 646
ApoI RAATTY 1 cut(s) 209
ArsI GACNNNNNNTTYG 2 cut(s) 462, 494
Asp700I GAANNNNTTC 1 cut(s) 429
AspS9I GGNCC 2 cut(s) 401, 647
AvaI CYCGRG 1 cut(s) 789
BbsI GAAGAC 1 cut(s) 684
Bbv12I GWGCWC 1 cut(s) 375
BccI CCATC 1 cut(s) 767
BceAI ACGGC 1 cut(s) 353
BcgI CGANNNNNNTGC 2 cut(s) 806, 840
BclI TGATCA 1 cut(s) 187
BcoDI GTCTC 1 cut(s) 212
BfaI CTAG 1 cut(s) 707
BisI GCNGC 2 cut(s) 333, 366
BlpI GCTNAGC 1 cut(s) 374
BlsI GCNGC 2 cut(s) 334, 367
BmeT110I CYCGRG 1 cut(s) 789
BmgT120I GGNCC 2 cut(s) 401, 647
BpiI GAAGAC 1 cut(s) 684
Bpu10I CCTNAGC 1 cut(s) 161
Bpu1102I GCTNAGC 1 cut(s) 374
BpuEI CTTGAG 3 cut(s) 114, 636, 833
Bsc4I CCNNNNNNNGG 3 cut(s) 345, 398, 450
BseGI GGATG 1 cut(s) 778
BseLI CCNNNNNNNGG 3 cut(s) 345, 398, 450
BseMII CTCAG 4 cut(s) 152, 388, 564, 714
BseRI GAGGAG 1 cut(s) 41
Bsh1236I CGCG 1 cut(s) 477
BshFI GGCC 6 cut(s) 109, 159, 402, 459, 517, 648
BsiHKAI GWGCWC 1 cut(s) 375
BsiHKCI CYCGRG 1 cut(s) 789
BslFI GGGAC 1 cut(s) 375
BslI CCNNNNNNNGG 3 cut(s) 345, 398, 450
BsmAI GTCTC 1 cut(s) 212
BsmFI GGGAC 1 cut(s) 375
BsnI GGCC 6 cut(s) 109, 159, 402, 459, 517, 648
BsoBI CYCGRG 1 cut(s) 789
Bsp1286I GDGCHC 1 cut(s) 375
Bsp143I GATC 2 cut(s) 187, 463
Bsp1720I GCTNAGC 1 cut(s) 374
BspACI CCGC 3 cut(s) 140, 333, 366
BspANI GGCC 6 cut(s) 109, 159, 402, 459, 517, 648
BspCNI CTCAG 4 cut(s) 153, 387, 565, 713
BspFNI CGCG 1 cut(s) 477
BspPI GGATC 1 cut(s) 458
BssMI GATC 2 cut(s) 187, 463
Bst4CI ACNGT 2 cut(s) 266, 527
BstC8I GCNNGC 2 cut(s) 475, 591
BstDEI CTNAG 5 cut(s) 161, 166, 374, 573, 700
BstF5I GGATG 1 cut(s) 778
BstFNI CGCG 1 cut(s) 477
BstKTI GATC 2 cut(s) 190, 466
BstMAI GTCTC 1 cut(s) 212
BstMBI GATC 2 cut(s) 187, 463
BstMWI GCNNNNNNNGC 3 cut(s) 554, 662, 692
BstNSI RCATGY 1 cut(s) 199
BstUI CGCG 1 cut(s) 477
BstV2I GAAGAC 1 cut(s) 684
BsuRI GGCC 6 cut(s) 109, 159, 402, 459, 517, 648
BtsCI GGATG 1 cut(s) 778
BtsIMutI CAGTG 1 cut(s) 532
Cac8I GCNNGC 2 cut(s) 475, 591
CaiI CAGNNNCTG 1 cut(s) 317
Cfr13I GGNCC 2 cut(s) 401, 647
CseI GACGC 1 cut(s) 466
Csp6I GTAC 1 cut(s) 715
CviAII CATG 1 cut(s) 196
CviQI GTAC 1 cut(s) 715
DdeI CTNAG 5 cut(s) 161, 166, 374, 573, 700
DpnI GATC 2 cut(s) 189, 465
DpnII GATC 2 cut(s) 187, 463
DrdI GACNNNNNNGTC 1 cut(s) 279
DseDI GACNNNNNNGTC 1 cut(s) 279
EciI GGCGGA 1 cut(s) 155
Eco147I AGGCCT 2 cut(s) 159, 517
Eco57I CTGAAG 1 cut(s) 396
Eco88I CYCGRG 1 cut(s) 789
EcoT22I ATGCAT 1 cut(s) 228
FaeI CATG 1 cut(s) 199
FalI AAGNNNNNCTT 2 cut(s) 607, 639
FaqI GGGAC 1 cut(s) 375
FatI CATG 1 cut(s) 195
FbaI TGATCA 1 cut(s) 187
Fnu4HI GCNGC 2 cut(s) 333, 366
FokI GGATG 1 cut(s) 785
Fsp4HI GCNGC 2 cut(s) 333, 366
FspBI CTAG 1 cut(s) 707
GluI GCNGC 2 cut(s) 333, 366
HaeIII GGCC 6 cut(s) 109, 159, 402, 459, 517, 648
HgaI GACGC 1 cut(s) 466
Hin1II CATG 1 cut(s) 199
HinfI GANTC 4 cut(s) 41, 569, 795, 808
Hpy166II GTNNAC 1 cut(s) 269
Hpy188I TCNGA 5 cut(s) 245, 309, 348, 574, 828
Hpy188III TCNNGA 4 cut(s) 74, 131, 284, 812
Hpy8I GTNNAC 1 cut(s) 269
HpyAV CCTTC 4 cut(s) 130, 420, 455, 612
HpyCH4III ACNGT 2 cut(s) 266, 527
HpyCH4V TGCA 4 cut(s) 16, 226, 695, 726
HpyF10VI GCNNNNNNNGC 3 cut(s) 554, 662, 692
HpyF3I CTNAG 5 cut(s) 161, 166, 374, 573, 700
Hsp92II CATG 1 cut(s) 199
Ksp22I TGATCA 1 cut(s) 187
Kzo9I GATC 2 cut(s) 187, 463
LmnI GCTCC 2 cut(s) 545, 691
LpnPI CCDG 3 cut(s) 173, 303, 528
MaeI CTAG 1 cut(s) 707
MaeIII GTNAC 1 cut(s) 482
MalI GATC 2 cut(s) 189, 465
MboI GATC 2 cut(s) 187, 463
MboII GAAGA 3 cut(s) 117, 689, 794
MhlI GDGCHC 1 cut(s) 375
MluCI AATT 2 cut(s) 209, 799
MlyI GAGTC 2 cut(s) 802, 804
MmeI TCCRAC 1 cut(s) 223
Mph1103I ATGCAT 1 cut(s) 228
MroXI GAANNNNTTC 1 cut(s) 429
MseI TTAA 3 cut(s) 177, 602, 627
MvnI CGCG 1 cut(s) 477
MwoI GCNNNNNNNGC 3 cut(s) 554, 662, 692
NdeII GATC 2 cut(s) 187, 463
NlaIII CATG 1 cut(s) 199
NmeAIII GCCGAG 1 cut(s) 397
NmuCI GTSAC 1 cut(s) 482
NsiI ATGCAT 1 cut(s) 228
NspI RCATGY 1 cut(s) 199
PceI AGGCCT 2 cut(s) 159, 517
PciI ACATGT 1 cut(s) 195
PdmI GAANNNNTTC 1 cut(s) 429
PfeI GAWTC 2 cut(s) 41, 569
PkrI GCNGC 2 cut(s) 334, 367
PleI GAGTC 2 cut(s) 802, 803
PpsI GAGTC 2 cut(s) 802, 803
PscI ACATGT 1 cut(s) 195
PsiI TTATAA 1 cut(s) 278
PspPI GGNCC 2 cut(s) 401, 647
PstNI CAGNNNCTG 1 cut(s) 317
RsaI GTAC 1 cut(s) 716
RsaNI GTAC 1 cut(s) 715
SaqAI TTAA 3 cut(s) 177, 602, 627
SatI GCNGC 2 cut(s) 333, 366
Sau3AI GATC 2 cut(s) 187, 463
Sau96I GGNCC 2 cut(s) 401, 647
SchI GAGTC 2 cut(s) 802, 804
SduI GDGCHC 1 cut(s) 375
SmlI CTYRAG 3 cut(s) 129, 651, 812
SmoI CTYRAG 3 cut(s) 129, 651, 812
Sse9I AATT 2 cut(s) 209, 799
SseBI AGGCCT 2 cut(s) 159, 517
SsiI CCGC 3 cut(s) 140, 333, 366
SspMI CTAG 1 cut(s) 707
StuI AGGCCT 2 cut(s) 159, 517
TaaI ACNGT 2 cut(s) 266, 527
TaqI TCGA 3 cut(s) 213, 439, 462
TasI AATT 2 cut(s) 209, 799
TauI GCSGC 2 cut(s) 335, 368
TfiI GAWTC 2 cut(s) 41, 569
Tru1I TTAA 3 cut(s) 177, 602, 627
Tru9I TTAA 3 cut(s) 177, 602, 627
TscAI CASTG 1 cut(s) 532
TseFI GTSAC 1 cut(s) 482
Tsp45I GTSAC 1 cut(s) 482
TspDTI ATGAA 1 cut(s) 422
TspGWI ACGGA 3 cut(s) 501, 753, 794
TspRI CASTG 1 cut(s) 532
XapI RAATTY 1 cut(s) 209
XceI RCATGY 1 cut(s) 199
XmnI GAANNNNTTC 1 cut(s) 429
XspI CTAG 1 cut(s) 707
Zsp2I ATGCAT 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.