Rh5CG577300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
81820740 .. 81822101
1362 bp
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UTR
Exon/CDS
Intron
Rh5CG577300.1

Sequence Viewer

Length: 213 bp
ATGGCGTGCAGGCCTACTTCTCCTACTAAATTTTATTGGATTTTGGTTAGGATATCAAGGCAGAAGCACCTTTTGGCTGCTCCCACTCGCATTTGTGCTACTCCCTCTTTTTTTCCTAGTTTTGATACTGGATTTTTGGATGTGAGAACTCTAGCCGGAGAACAAGAGAATTGTTGGCAAGAGGTGGAAATTGATTATGATCTACATTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

70

Amino Acids

8.13

Weight (kDa)

6.02

Isoelectric Point (pI)

64.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 29
AjuI GAANNNNNNNTTGG 2 cut(s) 56, 88
AoxI GGCC 1 cut(s) 11
ApeKI GCWGC 1 cut(s) 77
ApoI RAATTY 1 cut(s) 29
BbvI GCAGC 1 cut(s) 64
BfaI CTAG 2 cut(s) 117, 152
BisI GCNGC 1 cut(s) 78
BlsI GCNGC 1 cut(s) 79
BsaBI GATNNNNATC 1 cut(s) 198
Bse1I ACTGG 1 cut(s) 133
Bse8I GATNNNNATC 1 cut(s) 198
BseGI GGATG 1 cut(s) 145
BseJI GATNNNNATC 1 cut(s) 198
BseNI ACTGG 1 cut(s) 133
BseXI GCAGC 1 cut(s) 64
BsgI GTGCAG 1 cut(s) 28
BshFI GGCC 1 cut(s) 13
BsiSI CCGG 1 cut(s) 156
BsnI GGCC 1 cut(s) 13
Bsp143I GATC 1 cut(s) 199
BspANI GGCC 1 cut(s) 13
BsrI ACTGG 1 cut(s) 133
BssMI GATC 1 cut(s) 199
BstC8I GCNNGC 2 cut(s) 7, 11
BstF5I GGATG 1 cut(s) 145
BstKTI GATC 1 cut(s) 202
BstMBI GATC 1 cut(s) 199
BstV1I GCAGC 1 cut(s) 64
BsuRI GGCC 1 cut(s) 13
BtsCI GGATG 1 cut(s) 145
Cac8I GCNNGC 2 cut(s) 7, 11
CviJI RGCY 3 cut(s) 13, 77, 155
CviKI_1 RGCY 3 cut(s) 13, 77, 155
DpnI GATC 1 cut(s) 201
DpnII GATC 1 cut(s) 199
Eco147I AGGCCT 1 cut(s) 13
Eco32I GATATC 1 cut(s) 54
EcoRV GATATC 1 cut(s) 54
FaiI YATR 1 cut(s) 198
Fnu4HI GCNGC 1 cut(s) 78
FokI GGATG 1 cut(s) 152
Fsp4HI GCNGC 1 cut(s) 78
FspBI CTAG 2 cut(s) 117, 152
GluI GCNGC 1 cut(s) 78
HaeIII GGCC 1 cut(s) 13
HapII CCGG 1 cut(s) 156
HpaII CCGG 1 cut(s) 156
HpyCH4V TGCA 1 cut(s) 9
Kzo9I GATC 1 cut(s) 199
LmnI GCTCC 1 cut(s) 85
LpnPI CCDG 2 cut(s) 114, 169
Lsp1109I GCAGC 1 cut(s) 64
MaeI CTAG 2 cut(s) 117, 152
MalI GATC 1 cut(s) 201
MboI GATC 1 cut(s) 199
MluCI AATT 3 cut(s) 29, 169, 189
MnlI CCTC 2 cut(s) 115, 175
MspI CCGG 1 cut(s) 156
NdeII GATC 1 cut(s) 199
PceI AGGCCT 1 cut(s) 13
PkrI GCNGC 1 cut(s) 79
SatI GCNGC 1 cut(s) 78
Sau3AI GATC 1 cut(s) 199
SetI ASST 2 cut(s) 72, 186
Sse9I AATT 3 cut(s) 29, 169, 189
SseBI AGGCCT 1 cut(s) 13
SspMI CTAG 2 cut(s) 117, 152
StuI AGGCCT 1 cut(s) 13
TasI AATT 3 cut(s) 29, 169, 189
TseI GCWGC 1 cut(s) 77
XapI RAATTY 1 cut(s) 29
XspI CTAG 2 cut(s) 117, 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.