pycom06g01480

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
1537515 .. 1537799
285 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g01480.1

Sequence Viewer

Length: 285 bp
ATGTCTCCACAACTTCAACGCAAAGATAATAGCAGCCAACTCCAAATCATGTGTAGGGTAATTCATCTCATGGGTTTTCAACTGCCGCGAAGCATAAGCAATCACCCTACCATGCTGCATCAATACACATCCCAGACCATTCAAGGAAGCATCGCTATAAACCTCGAAATCACCACTATCGTCCGGGAGTGCCAAAACAGGTGCATGAGTGAGACAATGCTTCAACTGCTGGAAACTTTGCTCACACTTATCATTCCACTCAAACTTAACATCTTTCCTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

95

Amino Acids

10.81

Weight (kDa)

8.49

Isoelectric Point (pI)

62.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 88
AciI CCGC 1 cut(s) 86
AgsI TTSAA 4 cut(s) 17, 80, 143, 224
Alw26I GTCTC 2 cut(s) 9, 206
ApeKI GCWGC 2 cut(s) 33, 115
AsuC2I CCSGG 1 cut(s) 185
AsuHPI GGTGA 2 cut(s) 95, 163
BbvI GCAGC 2 cut(s) 45, 102
BcnI CCSGG 1 cut(s) 185
BcoDI GTCTC 2 cut(s) 9, 206
BisI GCNGC 3 cut(s) 34, 86, 116
BlsI GCNGC 3 cut(s) 35, 87, 117
Bme1390I CCNGG 1 cut(s) 185
BmrFI CCNGG 1 cut(s) 185
BmsI GCATC 2 cut(s) 127, 159
BpuMI CCSGG 1 cut(s) 185
BseGI GGATG 1 cut(s) 128
BseXI GCAGC 2 cut(s) 45, 102
Bsh1236I CGCG 1 cut(s) 88
BsiSI CCGG 1 cut(s) 184
BsmAI GTCTC 2 cut(s) 9, 206
BspACI CCGC 1 cut(s) 86
BspFNI CGCG 1 cut(s) 88
BstF5I GGATG 1 cut(s) 128
BstFNI CGCG 1 cut(s) 88
BstMAI GTCTC 2 cut(s) 9, 206
BstMWI GCNNNNNNNGC 1 cut(s) 226
BstSCI CCNGG 1 cut(s) 183
BstUI CGCG 1 cut(s) 88
BstV1I GCAGC 2 cut(s) 45, 102
BtgZI GCGATG 1 cut(s) 136
BtsCI GGATG 1 cut(s) 128
CviAII CATG 4 cut(s) 49, 70, 112, 205
CviJI RGCY 1 cut(s) 36
CviKI_1 RGCY 1 cut(s) 36
FaeI CATG 4 cut(s) 52, 73, 115, 208
FaiI YATR 6 cut(s) 50, 71, 95, 113, 158, 206
FatI CATG 4 cut(s) 48, 69, 111, 204
Fnu4HI GCNGC 3 cut(s) 34, 86, 116
FokI GGATG 1 cut(s) 115
Fsp4HI GCNGC 3 cut(s) 34, 86, 116
GluI GCNGC 3 cut(s) 34, 86, 116
HapII CCGG 1 cut(s) 184
Hin1II CATG 4 cut(s) 52, 73, 115, 208
HpaII CCGG 1 cut(s) 184
HphI GGTGA 2 cut(s) 95, 163
HpyCH4V TGCA 2 cut(s) 118, 204
HpyF10VI GCNNNNNNNGC 1 cut(s) 226
Hsp92II CATG 4 cut(s) 52, 73, 115, 208
LpnPI CCDG 4 cut(s) 146, 184, 197, 215
Lsp1109I GCAGC 2 cut(s) 45, 102
LweI GCATC 2 cut(s) 127, 159
MluCI AATT 1 cut(s) 60
MnlI CCTC 1 cut(s) 173
MseI TTAA 2 cut(s) 267, 283
MspI CCGG 1 cut(s) 184
MspR9I CCNGG 1 cut(s) 185
MvnI CGCG 1 cut(s) 88
MwoI GCNNNNNNNGC 1 cut(s) 226
NciI CCSGG 1 cut(s) 185
NlaIII CATG 4 cut(s) 52, 73, 115, 208
PfoI TCCNGGA 1 cut(s) 183
PkrI GCNGC 3 cut(s) 35, 87, 117
SaqAI TTAA 2 cut(s) 267, 283
SatI GCNGC 3 cut(s) 34, 86, 116
ScrFI CCNGG 1 cut(s) 185
SetI ASST 2 cut(s) 165, 203
SfaNI GCATC 2 cut(s) 127, 159
Sse9I AATT 1 cut(s) 60
SsiI CCGC 1 cut(s) 86
StyD4I CCNGG 1 cut(s) 183
TaqI TCGA 1 cut(s) 165
TasI AATT 1 cut(s) 60
TauI GCSGC 1 cut(s) 88
Tru1I TTAA 2 cut(s) 267, 283
Tru9I TTAA 2 cut(s) 267, 283
TseI GCWGC 2 cut(s) 33, 115
TspDTI ATGAA 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.