pycom11g05150

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
3989777 .. 3990013
237 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g05150.1

Sequence Viewer

Length: 237 bp
ATGTGTAGGGTAATTCATCTCATGGGTTTTCAACTGCCGCGAAGCATAAGCAATCACCCTACCATGCTGCATCAATACACATCCCAGACCATTCAAGGAAGCATCGCTATAAACCTCGAAATCACCGCTATCGTCCGGGAGTGCCAAAACAGGTGCATGAGTGAGACAATGCTTCAATTGTCGGAAACTTTGCTCACACTTATTATTCCACTCAAACTTAACATATTTCCTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

79

Amino Acids

8.9

Weight (kDa)

7.73

Isoelectric Point (pI)

48.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 40
AciI CCGC 2 cut(s) 38, 126
AgsI TTSAA 3 cut(s) 32, 95, 176
Alw26I GTCTC 1 cut(s) 158
ApeKI GCWGC 1 cut(s) 67
AsuC2I CCSGG 1 cut(s) 137
AsuHPI GGTGA 2 cut(s) 47, 115
BbvI GCAGC 1 cut(s) 54
BcnI CCSGG 1 cut(s) 137
BcoDI GTCTC 1 cut(s) 158
BisI GCNGC 2 cut(s) 38, 68
BlsI GCNGC 2 cut(s) 39, 69
Bme1390I CCNGG 1 cut(s) 137
BmrFI CCNGG 1 cut(s) 137
BmsI GCATC 2 cut(s) 79, 111
BpuMI CCSGG 1 cut(s) 137
BseGI GGATG 1 cut(s) 80
BseXI GCAGC 1 cut(s) 54
Bsh1236I CGCG 1 cut(s) 40
BsiSI CCGG 1 cut(s) 136
BsmAI GTCTC 1 cut(s) 158
BspACI CCGC 2 cut(s) 38, 126
BspFNI CGCG 1 cut(s) 40
BstF5I GGATG 1 cut(s) 80
BstFNI CGCG 1 cut(s) 40
BstMAI GTCTC 1 cut(s) 158
BstSCI CCNGG 1 cut(s) 135
BstUI CGCG 1 cut(s) 40
BstV1I GCAGC 1 cut(s) 54
BtgZI GCGATG 1 cut(s) 88
BtsCI GGATG 1 cut(s) 80
CviAII CATG 3 cut(s) 22, 64, 157
FaeI CATG 3 cut(s) 25, 67, 160
FaiI YATR 6 cut(s) 23, 47, 65, 110, 158, 224
FatI CATG 3 cut(s) 21, 63, 156
Fnu4HI GCNGC 2 cut(s) 38, 68
FokI GGATG 1 cut(s) 67
Fsp4HI GCNGC 2 cut(s) 38, 68
GluI GCNGC 2 cut(s) 38, 68
HapII CCGG 1 cut(s) 136
Hin1II CATG 3 cut(s) 25, 67, 160
HpaII CCGG 1 cut(s) 136
HphI GGTGA 2 cut(s) 47, 115
Hpy188I TCNGA 1 cut(s) 184
HpyCH4V TGCA 2 cut(s) 70, 156
Hsp92II CATG 3 cut(s) 25, 67, 160
LpnPI CCDG 3 cut(s) 98, 136, 149
Lsp1109I GCAGC 1 cut(s) 54
LweI GCATC 2 cut(s) 79, 111
MfeI CAATTG 1 cut(s) 176
MluCI AATT 2 cut(s) 12, 176
MmeI TCCRAC 1 cut(s) 162
MnlI CCTC 1 cut(s) 125
MseI TTAA 2 cut(s) 219, 235
MspI CCGG 1 cut(s) 136
MspR9I CCNGG 1 cut(s) 137
MunI CAATTG 1 cut(s) 176
MvnI CGCG 1 cut(s) 40
NciI CCSGG 1 cut(s) 137
NlaIII CATG 3 cut(s) 25, 67, 160
PfoI TCCNGGA 1 cut(s) 135
PkrI GCNGC 2 cut(s) 39, 69
SaqAI TTAA 2 cut(s) 219, 235
SatI GCNGC 2 cut(s) 38, 68
ScrFI CCNGG 1 cut(s) 137
SetI ASST 2 cut(s) 117, 155
SfaNI GCATC 2 cut(s) 79, 111
Sse9I AATT 2 cut(s) 12, 176
SsiI CCGC 2 cut(s) 38, 126
StyD4I CCNGG 1 cut(s) 135
TaqI TCGA 1 cut(s) 117
TasI AATT 2 cut(s) 12, 176
TauI GCSGC 1 cut(s) 40
Tru1I TTAA 2 cut(s) 219, 235
Tru9I TTAA 2 cut(s) 219, 235
TseI GCWGC 1 cut(s) 67
TspDTI ATGAA 1 cut(s) 5
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.