pycom07g00280

Belongs to the precorrin methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
284442 .. 286861
2420 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g00280.4

Sequence Viewer

Length: 1140 bp
ATGGCTCTTGTGAGTCGGATTCAGTCTCTCTCTGCCTTCTCTTCTTCCTCCACCCATTTCAGAAAACCCCACTCCTCCTCCTCCTTCAACCCCATTTCTTCATTACGCTTCAACTCCACTTCCTCCAATTCCTCCTCCTCACCTTTTACAGAGAAGGCTTCTATCGAGAGATACCAGCGAGACCACTGGCTCTACAAAAACCAACATTCAGAATCCGACCAACCCTTACCCACTCCCTGCTGCTCTCTCCCGCCCGATTTTAATTCCTTGAGGGAAAACGACATCGCTTTGCAGCTACCCGAGCTCAGGAACCTGCTTCAGGTGCTCAGAGAAAAGAGGCAGACTCAAGGTGATCGAGGCGGCTGCGGGCCCGGGAATGTCTTCTTGGTGGGGACGGGGCCTGGGGACCCCGAGCTCCTGACAATGAAGGCTTACAGAGTTATTCAGACTGCTGATTTGTTGCTCTATGATAGGTTGGTGTCCAATGATGTCTTAGATTTGGTTGGCTCTGGTGCTAGACTTCTCTATGTGGGCAAGACTGCTGGGTACCATAGCAGAACCCAGGAGGAGATACATGAATTGTTACTGAGTTTTGCCGAAGCTGGAGCTAATGTTGTGAGGCTCAAAGGAGGGGATCCGCTGGTGTTTGGAAGGGGTGGAGAGGAGATGGATTTTCTGCGGCAACAAGGAATTGAAGTTAACGTTATTCCAGGTATTACTGCTGCTTCAGGGATAGCAGCAAATCTAGGGATTCCGTTAACTCATCGAGGTGTCTCAAATAGTGTTAGATTTCTCACCGGCCACTCCAGGAAGGGAGGAACAGATCCTCTGTTTGTGGCAGAGAATGCAGCTGACCCTGATTCGACCTTGGTGGTTTACATGGGTTTGTCGACTCTCCCTTCTCTTGCTCAAAAGTTGGTGCATCATGGTCTACCGCCAAATACACCAGCTGTTGCAGTTGAGCGAGGGACCACACCTCAACAACGCATGGTTTTTGCAGAACTGAAGGATGTTGCAGATGAAATTGTATCAGCAGAGTTAGTATCACCAACGTTGATCATCATTGGGAAAGTAGTGGCACTTTCACCGTTGTGGCCATATGCTTCAAAGGAAGTATCCTGTCTTGTAGAAACACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

380

Amino Acids

41.0

Weight (kDa)

6.22

Isoelectric Point (pI)

39.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 321
Acc65I GGTACC 1 cut(s) 546
AccB1I GGYRCC 1 cut(s) 546
AccI GTMKAC 2 cut(s) 890, 931
AciI CCGC 6 cut(s) 251, 360, 366, 638, 679, 935
AclI AACGTT 2 cut(s) 702, 1052
AclWI GGATC 3 cut(s) 629, 642, 818
AcoI YGGCCR 2 cut(s) 799, 1094
AcuI CTGAAG 3 cut(s) 302, 711, 1025
AfaI GTAC 1 cut(s) 548
AfiI CCNNNNNNNGG 2 cut(s) 306, 319
AgsI TTSAA 4 cut(s) 88, 112, 695, 1107
AjnI CCWGG 4 cut(s) 400, 561, 709, 806
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
AleI CACNNNNGTG 1 cut(s) 1090
AluBI AGCT 7 cut(s) 295, 304, 415, 602, 608, 851, 950
AluI AGCT 7 cut(s) 295, 304, 415, 602, 608, 851, 950
Alw21I GWGCWC 3 cut(s) 306, 327, 417
Alw26I GTCTC 3 cut(s) 30, 174, 778
AlwI GGATC 3 cut(s) 629, 642, 818
Ama87I CYCGRG 3 cut(s) 299, 371, 410
AoxI GGCC 4 cut(s) 368, 398, 799, 1094
ApaI GGGCCC 1 cut(s) 372
ApeKI GCWGC 6 cut(s) 240, 292, 363, 722, 737, 848
ArsI GACNNNNNNTTYG 2 cut(s) 439, 471
Asp700I GAANNNNTTC 1 cut(s) 380
Asp718I GGTACC 1 cut(s) 546
AspS9I GGNCC 5 cut(s) 368, 369, 398, 406, 969
AsuC2I CCSGG 2 cut(s) 372, 373
AsuHPI GGTGA 5 cut(s) 132, 362, 787, 1038, 1077
AvaI CYCGRG 3 cut(s) 299, 371, 410
AvaII GGWCC 2 cut(s) 406, 969
BaeGI GKGCMC 1 cut(s) 372
BalI TGGCCA 1 cut(s) 1096
BamHI GGATCC 1 cut(s) 634
BanI GGYRCC 1 cut(s) 546
BanII GRGCYC 3 cut(s) 306, 372, 417
BbsI GAAGAC 1 cut(s) 373
Bbv12I GWGCWC 3 cut(s) 306, 327, 417
BbvI GCAGC 6 cut(s) 227, 304, 350, 709, 749, 860
BccI CCATC 1 cut(s) 661
BcgI CGANNNNNNTGC 2 cut(s) 345, 379
BciT130I CCWGG 4 cut(s) 402, 563, 711, 808
BciVI GTATCC 1 cut(s) 1126
BclI TGATCA 1 cut(s) 1056
BcnI CCSGG 2 cut(s) 372, 373
BcoDI GTCTC 3 cut(s) 30, 174, 778
BfaI CTAG 2 cut(s) 516, 746
BfmI CTRYAG 1 cut(s) 1136
BfuAI ACCTGC 1 cut(s) 321
BfuI GTATCC 1 cut(s) 1126
BisI GCNGC 8 cut(s) 241, 293, 361, 364, 680, 723, 738, 849
BlsI GCNGC 8 cut(s) 242, 294, 362, 365, 681, 724, 739, 850
Bme1390I CCNGG 6 cut(s) 372, 373, 402, 563, 711, 808
Bme18I GGWCC 2 cut(s) 406, 969
BmeT110I CYCGRG 3 cut(s) 299, 371, 410
BmgT120I GGNCC 5 cut(s) 368, 369, 398, 406, 969
BmiI GGNNCC 8 cut(s) 311, 370, 399, 407, 408, 548, 636, 970
BmrFI CCNGG 6 cut(s) 372, 373, 402, 563, 711, 808
BmsI GCATC 1 cut(s) 931
BpiI GAAGAC 1 cut(s) 373
BplI GAGNNNNNCTC 2 cut(s) 328, 360
BpmI CTGGAG 2 cut(s) 624, 790
Bpu10I CCTNAGC 1 cut(s) 305
BpuEI CTTGAG 2 cut(s) 289, 330
BpuMI CCSGG 2 cut(s) 372, 373
BsaI GGTCTC 1 cut(s) 174
BsaJI CCNNGG 4 cut(s) 371, 401, 561, 867
BsaXI ACNNNNNCTCC 4 cut(s) 62, 92, 597, 627
Bsc4I CCNNNNNNNGG 2 cut(s) 306, 319
Bse118I RCCGGY 1 cut(s) 797
Bse1I ACTGG 1 cut(s) 191
BseBI CCWGG 4 cut(s) 402, 563, 711, 808
BseDI CCNNGG 4 cut(s) 371, 401, 561, 867
BseGI GGATG 1 cut(s) 1015
BseLI CCNNNNNNNGG 2 cut(s) 306, 319
BseMII CTCAG 3 cut(s) 319, 340, 578
BseNI ACTGG 1 cut(s) 191
BseRI GAGGAG 7 cut(s) 64, 67, 70, 124, 127, 581, 677
BseSI GKGCMC 1 cut(s) 372
BseXI GCAGC 6 cut(s) 227, 304, 350, 709, 749, 860
BseYI CCCAGC 1 cut(s) 542
BshFI GGCC 4 cut(s) 370, 400, 801, 1096
BshNI GGYRCC 1 cut(s) 546
BsiHKAI GWGCWC 3 cut(s) 306, 327, 417
BsiHKCI CYCGRG 3 cut(s) 299, 371, 410
BsiSI CCGG 2 cut(s) 372, 798
BslFI GGGAC 3 cut(s) 406, 419, 982
BslI CCNNNNNNNGG 2 cut(s) 306, 319
BsmAI GTCTC 3 cut(s) 30, 174, 778
BsmFI GGGAC 3 cut(s) 406, 419, 982
BsmI GAATGC 1 cut(s) 850
BsnI GGCC 4 cut(s) 370, 400, 801, 1096
Bso31I GGTCTC 1 cut(s) 174
BsoBI CYCGRG 3 cut(s) 299, 371, 410
Bsp120I GGGCCC 1 cut(s) 368
Bsp1286I GDGCHC 4 cut(s) 306, 327, 372, 417
Bsp143I GATC 4 cut(s) 352, 634, 823, 1056
BspACI CCGC 6 cut(s) 251, 360, 366, 638, 679, 935
BspANI GGCC 4 cut(s) 370, 400, 801, 1096
BspCNI CTCAG 3 cut(s) 318, 339, 579
BspLI GGNNCC 8 cut(s) 311, 370, 399, 407, 408, 548, 636, 970
BspMI ACCTGC 1 cut(s) 321
BspPI GGATC 3 cut(s) 629, 642, 818
BspT107I GGYRCC 1 cut(s) 546
BspTNI GGTCTC 1 cut(s) 174
BsrFI RCCGGY 1 cut(s) 797
BsrI ACTGG 1 cut(s) 191
BssAI RCCGGY 1 cut(s) 797
BssECI CCNNGG 4 cut(s) 371, 401, 561, 867
BssMI GATC 4 cut(s) 352, 634, 823, 1056
BssT1I CCWWGG 1 cut(s) 867
Bst2UI CCWGG 4 cut(s) 402, 563, 711, 808
Bst4CI ACNGT 1 cut(s) 1089
Bst6I CTCTTC 1 cut(s) 46
BstAPI GCANNNNNTGC 1 cut(s) 845
BstC8I GCNNGC 1 cut(s) 368
BstDEI CTNAG 4 cut(s) 305, 326, 493, 587
BstENI CCTNNNNNAGG 1 cut(s) 317
BstF5I GGATG 1 cut(s) 1015
BstKTI GATC 4 cut(s) 355, 637, 826, 1059
BstMAI GTCTC 3 cut(s) 30, 174, 778
BstMBI GATC 4 cut(s) 352, 634, 823, 1056
BstMWI GCNNNNNNNGC 3 cut(s) 301, 322, 845
BstNI CCWGG 4 cut(s) 402, 563, 711, 808
BstSCI CCNGG 6 cut(s) 370, 371, 400, 561, 709, 806
BstSFI CTRYAG 1 cut(s) 1136
BstSLI GKGCMC 1 cut(s) 372
BstV1I GCAGC 6 cut(s) 227, 304, 350, 709, 749, 860
BstV2I GAAGAC 1 cut(s) 373
BstX2I RGATCY 2 cut(s) 634, 823
BstYI RGATCY 2 cut(s) 634, 823
BsuI GTATCC 1 cut(s) 1126
BsuRI GGCC 4 cut(s) 370, 400, 801, 1096
BtgZI GCGATG 1 cut(s) 268
BtsCI GGATG 1 cut(s) 1015
BtsIMutI CAGTG 1 cut(s) 184
BveI ACCTGC 1 cut(s) 321
Cac8I GCNNGC 1 cut(s) 368
Cfr10I RCCGGY 1 cut(s) 797
Cfr13I GGNCC 5 cut(s) 368, 369, 398, 406, 969
Cfr9I CCCGGG 1 cut(s) 371
Csp6I GTAC 1 cut(s) 547
CviAII CATG 4 cut(s) 575, 880, 926, 988
CviQI GTAC 1 cut(s) 547
DdeI CTNAG 4 cut(s) 305, 326, 493, 587
DpnI GATC 4 cut(s) 354, 636, 825, 1058
DpnII GATC 4 cut(s) 352, 634, 823, 1056
EaeI YGGCCR 2 cut(s) 799, 1094
Eam1104I CTCTTC 1 cut(s) 46
EarI CTCTTC 1 cut(s) 46
Ecl136II GAGCTC 2 cut(s) 304, 415
Eco130I CCWWGG 1 cut(s) 867
Eco24I GRGCYC 3 cut(s) 306, 372, 417
Eco31I GGTCTC 1 cut(s) 174
Eco47I GGWCC 2 cut(s) 406, 969
Eco53kI GAGCTC 2 cut(s) 304, 415
Eco57I CTGAAG 3 cut(s) 302, 711, 1025
Eco88I CYCGRG 3 cut(s) 299, 371, 410
EcoICRI GAGCTC 2 cut(s) 304, 415
EcoNI CCTNNNNNAGG 1 cut(s) 317
EcoO109I RGGNCCY 2 cut(s) 398, 406
EcoRII CCWGG 4 cut(s) 400, 561, 709, 806
EcoT14I CCWWGG 1 cut(s) 867
EcoT38I GRGCYC 3 cut(s) 306, 372, 417
ErhI CCWWGG 1 cut(s) 867
FaeI CATG 4 cut(s) 578, 883, 929, 991
FaqI GGGAC 3 cut(s) 406, 419, 982
FatI CATG 4 cut(s) 574, 879, 925, 987
FauI CCCGC 2 cut(s) 258, 359
FauNDI CATATG 1 cut(s) 1099
FbaI TGATCA 1 cut(s) 1056
FblI GTMKAC 2 cut(s) 890, 931
Fnu4HI GCNGC 8 cut(s) 241, 293, 361, 364, 680, 723, 738, 849
FokI GGATG 1 cut(s) 1022
FriOI GRGCYC 3 cut(s) 306, 372, 417
Fsp4HI GCNGC 8 cut(s) 241, 293, 361, 364, 680, 723, 738, 849
FspBI CTAG 2 cut(s) 516, 746
GluI GCNGC 8 cut(s) 241, 293, 361, 364, 680, 723, 738, 849
GsaI CCCAGC 1 cut(s) 546
GsuI CTGGAG 2 cut(s) 624, 790
HaeIII GGCC 4 cut(s) 370, 400, 801, 1096
HapII CCGG 2 cut(s) 372, 798
Hin1II CATG 4 cut(s) 578, 883, 929, 991
HincII GTYRAC 3 cut(s) 700, 759, 891
HindII GTYRAC 3 cut(s) 700, 759, 891
HinfI GANTC 7 cut(s) 13, 19, 212, 343, 751, 860, 892
HpaI GTTAAC 2 cut(s) 700, 759
HpaII CCGG 2 cut(s) 372, 798
HphI GGTGA 5 cut(s) 132, 362, 787, 1038, 1077
Hpy166II GTNNAC 5 cut(s) 700, 759, 877, 891, 932
Hpy188I TCNGA 6 cut(s) 18, 62, 211, 217, 329, 447
Hpy188III TCNNGA 3 cut(s) 166, 307, 418
Hpy8I GTNNAC 5 cut(s) 700, 759, 877, 891, 932
HpyAV CCTTC 8 cut(s) 46, 94, 148, 421, 645, 805, 909, 1000
HpyCH4III ACNGT 1 cut(s) 1089
HpyCH4IV ACGT 2 cut(s) 702, 1052
HpyCH4V TGCA 6 cut(s) 292, 848, 922, 956, 998, 1016
HpyF10VI GCNNNNNNNGC 3 cut(s) 301, 322, 845
HpyF3I CTNAG 4 cut(s) 305, 326, 493, 587
HpySE526I ACGT 2 cut(s) 702, 1052
Hsp92II CATG 4 cut(s) 578, 883, 929, 991
KflI GGGWCCC 1 cut(s) 406
KpnI GGTACC 1 cut(s) 550
Ksp22I TGATCA 1 cut(s) 1056
KspAI GTTAAC 2 cut(s) 700, 759
Kzo9I GATC 4 cut(s) 352, 634, 823, 1056
LmnI GCTCC 2 cut(s) 420, 605
Lsp1109I GCAGC 6 cut(s) 227, 304, 350, 709, 749, 860
LweI GCATC 1 cut(s) 931
MaeI CTAG 2 cut(s) 516, 746
MaeII ACGT 2 cut(s) 702, 1052
MaeIII GTNAC 1 cut(s) 582
MalI GATC 4 cut(s) 354, 636, 825, 1058
MboI GATC 4 cut(s) 352, 634, 823, 1056
MboII GAAGA 4 cut(s) 33, 36, 90, 373
MflI RGATCY 2 cut(s) 634, 823
MhlI GDGCHC 4 cut(s) 306, 327, 372, 417
MlsI TGGCCA 1 cut(s) 1096
MluCI AATT 5 cut(s) 127, 262, 578, 690, 1023
MluNI TGGCCA 1 cut(s) 1096
MlyI GAGTC 3 cut(s) 22, 337, 886
MmeI TCCRAC 1 cut(s) 240
Mox20I TGGCCA 1 cut(s) 1096
MroXI GAANNNNTTC 1 cut(s) 380
MscI TGGCCA 1 cut(s) 1096
MseI TTAA 3 cut(s) 261, 699, 758
MslI CAYNNNNRTG 2 cut(s) 768, 1090
Msp20I TGGCCA 1 cut(s) 1096
MspA1I CMGCKG 3 cut(s) 640, 851, 950
MspI CCGG 2 cut(s) 372, 798
MspR9I CCNGG 6 cut(s) 372, 373, 402, 563, 711, 808
Mva1269I GAATGC 1 cut(s) 850
MvaI CCWGG 4 cut(s) 402, 563, 711, 808
MwoI GCNNNNNNNGC 3 cut(s) 301, 322, 845
NciI CCSGG 2 cut(s) 372, 373
NdeI CATATG 1 cut(s) 1099
NdeII GATC 4 cut(s) 352, 634, 823, 1056
NlaIII CATG 4 cut(s) 578, 883, 929, 991
NlaIV GGNNCC 8 cut(s) 311, 370, 399, 407, 408, 548, 636, 970
OliI CACNNNNGTG 1 cut(s) 1090
PctI GAATGC 1 cut(s) 850
PdmI GAANNNNTTC 1 cut(s) 380
PfeI GAWTC 4 cut(s) 19, 212, 751, 860
PfoI TCCNGGA 1 cut(s) 806
PkrI GCNGC 8 cut(s) 242, 294, 362, 365, 681, 724, 739, 850
PleI GAGTC 3 cut(s) 21, 337, 886
PpsI GAGTC 3 cut(s) 21, 337, 886
PpuMI RGGWCCY 1 cut(s) 406
Psp124BI GAGCTC 2 cut(s) 306, 417
Psp1406I AACGTT 2 cut(s) 702, 1052
Psp5II RGGWCCY 1 cut(s) 406
Psp6I CCWGG 4 cut(s) 400, 561, 709, 806
PspFI CCCAGC 1 cut(s) 542
PspGI CCWGG 4 cut(s) 400, 561, 709, 806
PspN4I GGNNCC 8 cut(s) 311, 370, 399, 407, 408, 548, 636, 970
PspOMI GGGCCC 1 cut(s) 368
PspPI GGNCC 5 cut(s) 368, 369, 398, 406, 969
PspPPI RGGWCCY 1 cut(s) 406
PsuI RGATCY 2 cut(s) 634, 823
PvuII CAGCTG 2 cut(s) 851, 950
RsaI GTAC 1 cut(s) 548
RsaNI GTAC 1 cut(s) 547
RseI CAYNNNNRTG 2 cut(s) 768, 1090
SacI GAGCTC 2 cut(s) 306, 417
SalI GTCGAC 1 cut(s) 889
SaqAI TTAA 3 cut(s) 261, 699, 758
SatI GCNGC 8 cut(s) 241, 293, 361, 364, 680, 723, 738, 849
Sau3AI GATC 4 cut(s) 352, 634, 823, 1056
Sau96I GGNCC 5 cut(s) 368, 369, 398, 406, 969
SchI GAGTC 3 cut(s) 22, 337, 886
ScrFI CCNGG 6 cut(s) 372, 373, 402, 563, 711, 808
SduI GDGCHC 4 cut(s) 306, 327, 372, 417
SfaNI GCATC 1 cut(s) 931
SfcI CTRYAG 1 cut(s) 1136
SinI GGWCC 2 cut(s) 406, 969
SmaI CCCGGG 1 cut(s) 373
SmiMI CAYNNNNRTG 2 cut(s) 768, 1090
SmlI CTYRAG 2 cut(s) 268, 345
SmoI CTYRAG 2 cut(s) 268, 345
Sse9I AATT 5 cut(s) 127, 262, 578, 690, 1023
SsiI CCGC 6 cut(s) 251, 360, 366, 638, 679, 935
SspMI CTAG 2 cut(s) 516, 746
SstI GAGCTC 2 cut(s) 306, 417
StyD4I CCNGG 6 cut(s) 370, 371, 400, 561, 709, 806
StyI CCWWGG 1 cut(s) 867
TaaI ACNGT 1 cut(s) 1089
TaiI ACGT 2 cut(s) 705, 1055
TaqI TCGA 5 cut(s) 165, 355, 766, 863, 890
TasI AATT 5 cut(s) 127, 262, 578, 690, 1023
TauI GCSGC 2 cut(s) 363, 682
TfiI GAWTC 4 cut(s) 19, 212, 751, 860
Tru1I TTAA 3 cut(s) 261, 699, 758
Tru9I TTAA 3 cut(s) 261, 699, 758
TscAI CASTG 1 cut(s) 191
TseI GCWGC 6 cut(s) 240, 292, 363, 722, 737, 848
TspDTI ATGAA 4 cut(s) 90, 440, 591, 1035
TspGWI ACGGA 1 cut(s) 744
TspMI CCCGGG 1 cut(s) 371
TspRI CASTG 1 cut(s) 191
VpaK11BI GGWCC 2 cut(s) 406, 969
XagI CCTNNNNNAGG 1 cut(s) 317
XmaI CCCGGG 1 cut(s) 371
XmiI GTMKAC 2 cut(s) 890, 931
XmnI GAANNNNTTC 1 cut(s) 380
XspI CTAG 2 cut(s) 516, 746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.