Rh4BG149300

Belongs to the precorrin methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
26704786 .. 26706591
1806 bp
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UTR
Exon/CDS
Intron
Rh4BG149300.1

Sequence Viewer

Length: 285 bp
ATGGGTTTGTCGTCTCTCCCTTCTCTTGCTCAAAAGTTGGTCCATCATGGTCTGCCACTAACAACTCCAGCTGTTGCAGCTGTGCGAGGGACCAAACCTCAACAACGCATGGTGTTTGCAGAACTGAAGGACCTTGCCAATGAAATTACATCAGCAGAGTTGGTATCACCAACGCTCGATCATTGTCATTGGGAAAGTAGTTGCACTTTCACTTTCACCCTTGTGGCTCTATACTTCAAACCAAGTGTCCTCTCTTGTCCGAACCATATAGACACAATTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

94

Amino Acids

10.26

Weight (kDa)

6.16

Isoelectric Point (pI)

55.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 146
AgsI TTSAA 1 cut(s) 238
AleI CACNNNNGTG 1 cut(s) 221
AluBI AGCT 2 cut(s) 71, 80
AluI AGCT 2 cut(s) 71, 80
Alw26I GTCTC 1 cut(s) 18
ApeKI GCWGC 1 cut(s) 77
ArsI GACNNNNNNTTYG 2 cut(s) 231, 263
AspS9I GGNCC 3 cut(s) 40, 90, 130
AsuHPI GGTGA 2 cut(s) 159, 208
AvaII GGWCC 3 cut(s) 40, 90, 130
BbvI GCAGC 1 cut(s) 89
BccI CCATC 1 cut(s) 51
BcoDI GTCTC 1 cut(s) 18
BisI GCNGC 1 cut(s) 78
BlsI GCNGC 1 cut(s) 79
Bme18I GGWCC 3 cut(s) 40, 90, 130
BmgT120I GGNCC 3 cut(s) 40, 90, 130
BmiI GGNNCC 1 cut(s) 91
BpmI CTGGAG 1 cut(s) 51
BseXI GCAGC 1 cut(s) 89
BslFI GGGAC 1 cut(s) 103
BsmAI GTCTC 1 cut(s) 18
BsmBI CGTCTC 1 cut(s) 18
BsmFI GGGAC 1 cut(s) 103
Bsp143I GATC 1 cut(s) 178
BspLI GGNNCC 1 cut(s) 91
BssMI GATC 1 cut(s) 178
BstKTI GATC 1 cut(s) 181
BstMAI GTCTC 1 cut(s) 18
BstMBI GATC 1 cut(s) 178
BstMWI GCNNNNNNNGC 1 cut(s) 77
BstV1I GCAGC 1 cut(s) 89
Cfr13I GGNCC 3 cut(s) 40, 90, 130
CviAII CATG 2 cut(s) 47, 109
CviJI RGCY 3 cut(s) 71, 80, 227
CviKI_1 RGCY 3 cut(s) 71, 80, 227
DpnI GATC 1 cut(s) 180
DpnII GATC 1 cut(s) 178
Eco47I GGWCC 3 cut(s) 40, 90, 130
Eco57I CTGAAG 1 cut(s) 146
EcoO109I RGGNCCY 1 cut(s) 130
Esp3I CGTCTC 1 cut(s) 18
FaeI CATG 2 cut(s) 50, 112
FaiI YATR 5 cut(s) 48, 110, 232, 267, 269
FaqI GGGAC 1 cut(s) 103
FatI CATG 2 cut(s) 46, 108
Fnu4HI GCNGC 1 cut(s) 78
Fsp4HI GCNGC 1 cut(s) 78
GluI GCNGC 1 cut(s) 78
GsuI CTGGAG 1 cut(s) 51
Hin1II CATG 2 cut(s) 50, 112
HphI GGTGA 2 cut(s) 159, 208
Hpy188I TCNGA 1 cut(s) 261
HpyAV CCTTC 2 cut(s) 30, 121
HpyCH4V TGCA 3 cut(s) 77, 119, 204
HpyF10VI GCNNNNNNNGC 1 cut(s) 77
Hsp92II CATG 2 cut(s) 50, 112
Kzo9I GATC 1 cut(s) 178
LpnPI CCDG 1 cut(s) 81
Lsp1109I GCAGC 1 cut(s) 89
MalI GATC 1 cut(s) 180
MboI GATC 1 cut(s) 178
MfeI CAATTG 1 cut(s) 276
MluCI AATT 2 cut(s) 144, 276
MnlI CCTC 3 cut(s) 80, 108, 260
MslI CAYNNNNRTG 1 cut(s) 221
MspA1I CMGCKG 2 cut(s) 71, 80
MunI CAATTG 1 cut(s) 276
MwoI GCNNNNNNNGC 1 cut(s) 77
NdeII GATC 1 cut(s) 178
NlaIII CATG 2 cut(s) 50, 112
NlaIV GGNNCC 1 cut(s) 91
OliI CACNNNNGTG 1 cut(s) 221
PkrI GCNGC 1 cut(s) 79
PpuMI RGGWCCY 1 cut(s) 130
Psp5II RGGWCCY 1 cut(s) 130
PspN4I GGNNCC 1 cut(s) 91
PspPI GGNCC 3 cut(s) 40, 90, 130
PspPPI RGGWCCY 1 cut(s) 130
PvuII CAGCTG 2 cut(s) 71, 80
RseI CAYNNNNRTG 1 cut(s) 221
SatI GCNGC 1 cut(s) 78
Sau3AI GATC 1 cut(s) 178
Sau96I GGNCC 3 cut(s) 40, 90, 130
SetI ASST 4 cut(s) 73, 82, 100, 135
SinI GGWCC 3 cut(s) 40, 90, 130
SmiMI CAYNNNNRTG 1 cut(s) 221
Sse9I AATT 2 cut(s) 144, 276
TaqI TCGA 1 cut(s) 177
TasI AATT 2 cut(s) 144, 276
TseI GCWGC 1 cut(s) 77
TspDTI ATGAA 1 cut(s) 156
VpaK11BI GGWCC 3 cut(s) 40, 90, 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.