pycom11g25600

R3H-associated N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0001362
Physical Location & Seq
Reverse (-)
28354856 .. 28360946
6091 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1890 bp
ATGGCACATATGCTTAATCTGTTTTTAAATTTTAGACTTTATATTCTAGTGTGGGTGGTCTCACCTTCCCTCTCTTCCGTATTTCTAAGGCCGTGTTTGGTTGCGTTCCTCTTATTTCTCAGCGCCTTTGAAAGGAACGTTTCGTCGCCCTTTATCTCTCTCATCTCTTTTCTCAAAATCTATCGCCGCAGAAAAAACCCAGAAGCCCAGAAGAAGCAGAAGATTCAAAGCCGCAAGCTTTCAGATCAGATTTGCATCCAATCAATCATGGCGACTCCCGGCGTTCTCAACAGAGAAGACGGCTTTTTCCTCAACTCTCCTATCCTCGAACCTCGAAATGGAGAGAGTGTCAAATCCCGTGGAATGTCGATTGAGAAGAAGATTGAGCTGCTTGAGAGCATGGCTGGAACGGTTAGCAACCGACGGTCTCGAAGATGGGTAAATGATCGGATTTTGTTGGAACTTGTTCCTCGTCTAAATGCAGAAGAAATCAGAGGCTTGTTTGCTCCACCACCTTGGGGTGATGATGTACCGCTGTCAGCATTTTGCATGACTAATGTGCGAGAGTGGGATACATTTAGGAATATAGACATGGATAAGCAGGCTAATGTGATTGATTCCATGAAGGGCCCAAGTGCAAAGAAGAAGAGTCCTGTTGATGCTGATAAAACGGCCGTCTTGAATGCATGGCGTAGGGTTGATTGTCGAACAAGAGAGGCACTTCGCCGTGGCGTTTTCGCAGAACTTGTTGAGTTCTATGAGGAGCGCGTACGGGCCTTTGTTACAGAGACTGAAGATGGAGATGGAGATGTTCTGATCCTGCAGGTTCAAGATCCTCTCCGTCGATTGTTGCTCCATGGTGTTTGCGAGTTCTACAACTTGGTCTCGGTGACGGTTGCTGAATCGGAGAATGGGGAGTCAACTAAGATGACAAAGATAACGAAGAAAAAAGGGCGTCCTTGCTCAACAATCATTTCGATTTTCCATTCCAATTCCATGGCGAAGAAAGCTGTGAAATACTCTGTGGTTGACGCGTTCGCAGACTCGGCTTTCAAAGGGAACCCAGCAGCGGTTTGCTTGCTGGAGGAAGAAAGAGACGACCAGTGGCTACAGGCCGTGGCCGCCGAGTTCAACCTCTCCGAGACATGTTACTTGACTCGGCTCACTGAGTCTGACTCAGCTCCTCGGTTCGGTCTCAGATGGTTCACTCCTTCCAATGAGGTTGAGCTTTGTGGTCATGCAACATTAGCAGCTGCATACACTCTCTTTAACTCTGGTTTGGTAAAGTCCGACATTATTGAGTTTGCCACATTATCCGGAATCCTAAAAGCTAAAAAGGTTCCAGATGTTAAGACAGCCAACGGTTTGAATACTCACAATGGGGAAGCACAAGAGTCCTATTTTGTTGAACTCAATTTTCCTGCCGACCCCTCTAATGAATTCAACTCTGGTGATGTTTCGGTAATCTCTAAGGCCTTAGATGGTGCTTCTATGGTTGAAATAAGGAGGACAACTGTCACAGATGATTTACTTGTTGTGCTTCCATCAGCAAAAGCTGTCACAGATTTACAGCCGCAGTTAGATGCAATTCGCCAATGTCCAGGGTCTAGGGGAGTGATCGTTACGGGGATTTCTCCTCCAGAATCTGGATATGATTTTTACAGTAGATTCTTCTGTCCCAAACATGGGATTGATGAGGATCCCGTTTGTGGGAGCGCACATTGTGCCCTTGCATCATACTGGTGCAAAAAACTTGGAAAGTCTGATGTTTTTGCTTATCAGGCATCACCTCGAGGGGGAGCAATAAACGTTCATCTAGATGAGCAAAATCAAAGGGTACTGCTGCGAGGAAAAGCTGTTATTGTGATGGAAGGAACTGTTTTAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PhzC-PhzF

Protein Analysis

630

Amino Acids

70.06

Weight (kDa)

7.85

Isoelectric Point (pI)

47.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
R3H-assoc PF13902 123 - 243 5e-32 R3H-associated N-terminal domain
PhzC-PhzF PF02567 343 - 625 2.1e-83 Phenazine biosynthesis-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1791
Acc36I ACCTGC 1 cut(s) 814
AccB7I CCANNNNNTGG 1 cut(s) 1646
AccII CGCG 2 cut(s) 768, 1034
AccIII TCCGGA 1 cut(s) 1316
AciI CCGC 6 cut(s) 187, 232, 533, 1070, 1122, 1574
AclI AACGTT 2 cut(s) 138, 1809
AclWI GGATC 4 cut(s) 811, 827, 1694, 1707
AcoI YGGCCR 2 cut(s) 672, 1119
AcsI RAATTY 2 cut(s) 28, 1439
AcuI CTGAAG 1 cut(s) 813
AcyI GRCGYC 1 cut(s) 955
AdeI CACNNNGTG 1 cut(s) 1724
AfaI GTAC 3 cut(s) 531, 771, 1839
AflIII ACRYGT 2 cut(s) 1032, 1145
AjnI CCWGG 1 cut(s) 1600
Alw26I GTCTC 7 cut(s) 64, 432, 782, 889, 1089, 1136, 1199
AlwI GGATC 4 cut(s) 811, 827, 1694, 1707
AlwNI CAGNNNCTG 2 cut(s) 791, 1646
Ama87I CYCGRG 1 cut(s) 1791
Aor13HI TCCGGA 1 cut(s) 1316
AoxI GGCC 7 cut(s) 89, 628, 672, 774, 1113, 1119, 1473
ApaI GGGCCC 1 cut(s) 632
ApeKI GCWGC 5 cut(s) 388, 1067, 1250, 1253, 1843
ApoI RAATTY 2 cut(s) 28, 1439
Asp700I GAANNNNTTC 1 cut(s) 465
AspLEI GCGC 3 cut(s) 125, 768, 1718
AspS9I GGNCC 3 cut(s) 628, 629, 774
AsuC2I CCSGG 1 cut(s) 279
AsuHPI GGTGA 5 cut(s) 54, 533, 901, 1463, 1779
AvaI CYCGRG 1 cut(s) 1791
BaeGI GKGCMC 2 cut(s) 632, 1729
BamHI GGATCC 1 cut(s) 1699
BanII GRGCYC 1 cut(s) 632
BbsI GAAGAC 1 cut(s) 303
BbvI GCAGC 5 cut(s) 375, 1079, 1240, 1262, 1830
BccI CCATC 7 cut(s) 429, 791, 797, 1194, 1475, 1552, 1861
BceAI ACGGC 6 cut(s) 76, 316, 659, 687, 711, 1100
BciT130I CCWGG 1 cut(s) 1602
BciVI GTATCC 1 cut(s) 565
BcnI CCSGG 1 cut(s) 279
BcoDI GTCTC 7 cut(s) 64, 432, 782, 889, 1089, 1136, 1199
BfaI CTAG 3 cut(s) 47, 1608, 1817
BfmI CTRYAG 2 cut(s) 821, 1109
BfoI RGCGCY 1 cut(s) 126
BfuAI ACCTGC 1 cut(s) 814
BfuI GTATCC 1 cut(s) 565
BisI GCNGC 9 cut(s) 187, 232, 389, 1068, 1122, 1251, 1254, 1574, 1844
BlsI GCNGC 9 cut(s) 188, 233, 390, 1069, 1123, 1252, 1255, 1575, 1845
Bme1390I CCNGG 2 cut(s) 279, 1602
BmeT110I CYCGRG 1 cut(s) 1791
BmgT120I GGNCC 3 cut(s) 628, 629, 774
BmiI GGNNCC 4 cut(s) 630, 1061, 1341, 1701
BmrFI CCNGG 2 cut(s) 279, 1602
BmsI GCATC 5 cut(s) 264, 649, 1573, 1742, 1793
BoxI GACNNNNGTC 1 cut(s) 1514
BpiI GAAGAC 1 cut(s) 303
BplI GAGNNNNNCTC 2 cut(s) 1160, 1192
BpmI CTGGAG 2 cut(s) 1103, 1623
BpuEI CTTGAG 1 cut(s) 413
BpuMI CCSGG 1 cut(s) 279
BsaBI GATNNNNATC 2 cut(s) 254, 1698
BsaHI GRCGYC 1 cut(s) 955
BsaI GGTCTC 4 cut(s) 64, 432, 889, 1199
BsaJI CCNNGG 8 cut(s) 358, 515, 727, 856, 996, 1116, 1184, 1601
BsaWI WCCGGW 1 cut(s) 1316
BsaXI ACNNNNNCTCC 4 cut(s) 333, 363, 1605, 1635
Bse1I ACTGG 2 cut(s) 1102, 1745
Bse8I GATNNNNATC 2 cut(s) 254, 1698
BseAI TCCGGA 1 cut(s) 1316
BseBI CCWGG 1 cut(s) 1602
BseDI CCNNGG 8 cut(s) 358, 515, 727, 856, 996, 1116, 1184, 1601
BseGI GGATG 1 cut(s) 255
BseJI GATNNNNATC 2 cut(s) 254, 1698
BseMII CTCAG 4 cut(s) 133, 1158, 1191, 1210
BseNI ACTGG 2 cut(s) 1102, 1745
BseRI GAGGAG 3 cut(s) 776, 1173, 1626
BseSI GKGCMC 2 cut(s) 632, 1729
BseX3I CGGCCG 1 cut(s) 672
BseXI GCAGC 5 cut(s) 375, 1079, 1240, 1262, 1830
BseYI CCCAGC 1 cut(s) 1063
Bsh1236I CGCG 2 cut(s) 768, 1034
Bsh1285I CGRYCG 1 cut(s) 675
BshFI GGCC 7 cut(s) 91, 630, 674, 776, 1115, 1121, 1475
BsiEI CGRYCG 1 cut(s) 675
BsiHKCI CYCGRG 1 cut(s) 1791
BsiSI CCGG 2 cut(s) 279, 1317
BsiWI CGTACG 1 cut(s) 769
BslFI GGGAC 1 cut(s) 1662
BsmAI GTCTC 7 cut(s) 64, 432, 782, 889, 1089, 1136, 1199
BsmBI CGTCTC 1 cut(s) 1089
BsmFI GGGAC 1 cut(s) 1662
BsmI GAATGC 1 cut(s) 688
BsnI GGCC 7 cut(s) 91, 630, 674, 776, 1115, 1121, 1475
Bso31I GGTCTC 4 cut(s) 64, 432, 889, 1199
BsoBI CYCGRG 1 cut(s) 1791
Bsp120I GGGCCC 1 cut(s) 628
Bsp1286I GDGCHC 2 cut(s) 632, 1729
Bsp13I TCCGGA 1 cut(s) 1316
Bsp143I GATC 6 cut(s) 244, 445, 816, 832, 1617, 1699
Bsp19I CCATGG 2 cut(s) 856, 996
BspACI CCGC 6 cut(s) 187, 232, 533, 1070, 1122, 1574
BspANI GGCC 7 cut(s) 91, 630, 674, 776, 1115, 1121, 1475
BspCNI CTCAG 4 cut(s) 132, 1159, 1190, 1209
BspEI TCCGGA 1 cut(s) 1316
BspFNI CGCG 2 cut(s) 768, 1034
BspLI GGNNCC 4 cut(s) 630, 1061, 1341, 1701
BspMAI CTGCAG 1 cut(s) 825
BspMI ACCTGC 1 cut(s) 814
BspPI GGATC 4 cut(s) 811, 827, 1694, 1707
BspTNI GGTCTC 4 cut(s) 64, 432, 889, 1199
BsrI ACTGG 2 cut(s) 1102, 1745
BssECI CCNNGG 8 cut(s) 358, 515, 727, 856, 996, 1116, 1184, 1601
BssMI GATC 6 cut(s) 244, 445, 816, 832, 1617, 1699
BssNI GRCGYC 1 cut(s) 955
BssT1I CCWWGG 3 cut(s) 515, 856, 996
Bst2UI CCWGG 1 cut(s) 1602
Bst4CI ACNGT 7 cut(s) 412, 426, 895, 1364, 1516, 1664, 1879
Bst6I CTCTTC 2 cut(s) 79, 641
BstACI GRCGYC 1 cut(s) 955
BstAPI GCANNNNNTGC 1 cut(s) 1724
BstC8I GCNNGC 3 cut(s) 236, 603, 1079
BstDEI CTNAG 8 cut(s) 86, 119, 924, 1167, 1177, 1196, 1470, 1477
BstDSI CCRYGG 5 cut(s) 358, 727, 856, 996, 1116
BstENI CCTNNNNNAGG 1 cut(s) 130
BstF5I GGATG 1 cut(s) 255
BstFNI CGCG 2 cut(s) 768, 1034
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 3 cut(s) 125, 768, 1718
BstKTI GATC 6 cut(s) 247, 448, 819, 835, 1620, 1702
BstMAI GTCTC 7 cut(s) 64, 432, 782, 889, 1089, 1136, 1199
BstMBI GATC 6 cut(s) 244, 445, 816, 832, 1617, 1699
BstMCI CGRYCG 1 cut(s) 675
BstMWI GCNNNNNNNGC 6 cut(s) 1007, 1046, 1121, 1247, 1724, 1781
BstNI CCWGG 1 cut(s) 1602
BstNSI RCATGY 1 cut(s) 1149
BstPAI GACNNNNGTC 1 cut(s) 1514
BstSCI CCNGG 2 cut(s) 277, 1600
BstSFI CTRYAG 2 cut(s) 821, 1109
BstSLI GKGCMC 2 cut(s) 632, 1729
BstUI CGCG 2 cut(s) 768, 1034
BstV1I GCAGC 5 cut(s) 375, 1079, 1240, 1262, 1830
BstV2I GAAGAC 1 cut(s) 303
BstX2I RGATCY 2 cut(s) 832, 1699
BstXI CCANNNNNNTGG 2 cut(s) 516, 997
BstYI RGATCY 2 cut(s) 832, 1699
BstZI CGGCCG 1 cut(s) 672
BsuI GTATCC 1 cut(s) 565
BsuRI GGCC 7 cut(s) 91, 630, 674, 776, 1115, 1121, 1475
BtgI CCRYGG 5 cut(s) 358, 727, 856, 996, 1116
BtsCI GGATG 1 cut(s) 255
BtsIMutI CAGTG 2 cut(s) 1109, 1164
BveI ACCTGC 1 cut(s) 814
Cac8I GCNNGC 3 cut(s) 236, 603, 1079
CaiI CAGNNNCTG 2 cut(s) 791, 1646
CfoI GCGC 3 cut(s) 125, 768, 1718
Cfr13I GGNCC 3 cut(s) 628, 629, 774
CseI GACGC 2 cut(s) 944, 1040
Csp6I GTAC 3 cut(s) 530, 770, 1838
CspCI CAANNNNNGTGG 2 cut(s) 340, 375
CviQI GTAC 3 cut(s) 530, 770, 1838
DdeI CTNAG 8 cut(s) 86, 119, 924, 1167, 1177, 1196, 1470, 1477
DpnI GATC 6 cut(s) 246, 447, 818, 834, 1619, 1701
DpnII GATC 6 cut(s) 244, 445, 816, 832, 1617, 1699
DraI TTTAAA 1 cut(s) 27
DraIII CACNNNGTG 1 cut(s) 1724
EaeI YGGCCR 2 cut(s) 672, 1119
EagI CGGCCG 1 cut(s) 672
Eam1104I CTCTTC 2 cut(s) 79, 641
EarI CTCTTC 2 cut(s) 79, 641
EclXI CGGCCG 1 cut(s) 672
Eco130I CCWWGG 3 cut(s) 515, 856, 996
Eco147I AGGCCT 1 cut(s) 1475
Eco24I GRGCYC 1 cut(s) 632
Eco31I GGTCTC 4 cut(s) 64, 432, 889, 1199
Eco52I CGGCCG 1 cut(s) 672
Eco57I CTGAAG 1 cut(s) 813
Eco88I CYCGRG 1 cut(s) 1791
EcoNI CCTNNNNNAGG 1 cut(s) 130
EcoO109I RGGNCCY 1 cut(s) 628
EcoRI GAATTC 1 cut(s) 1439
EcoRII CCWGG 1 cut(s) 1600
EcoT14I CCWWGG 3 cut(s) 515, 856, 996
EcoT22I ATGCAT 1 cut(s) 688
EcoT38I GRGCYC 1 cut(s) 632
ErhI CCWWGG 3 cut(s) 515, 856, 996
Esp3I CGTCTC 1 cut(s) 1089
FaqI GGGAC 1 cut(s) 1662
FauNDI CATATG 1 cut(s) 9
Fnu4HI GCNGC 9 cut(s) 187, 232, 389, 1068, 1122, 1251, 1254, 1574, 1844
FokI GGATG 1 cut(s) 242
FriOI GRGCYC 1 cut(s) 632
Fsp4HI GCNGC 9 cut(s) 187, 232, 389, 1068, 1122, 1251, 1254, 1574, 1844
FspBI CTAG 3 cut(s) 47, 1608, 1817
GlaI GCGC 3 cut(s) 124, 767, 1717
GluI GCNGC 9 cut(s) 187, 232, 389, 1068, 1122, 1251, 1254, 1574, 1844
GsaI CCCAGC 1 cut(s) 1067
GsuI CTGGAG 2 cut(s) 1103, 1623
HaeII RGCGCY 1 cut(s) 126
HaeIII GGCC 7 cut(s) 91, 630, 674, 776, 1115, 1121, 1475
HapII CCGG 2 cut(s) 279, 1317
HgaI GACGC 2 cut(s) 944, 1040
HhaI GCGC 3 cut(s) 125, 768, 1718
Hin1I GRCGYC 1 cut(s) 955
Hin6I GCGC 3 cut(s) 123, 766, 1716
HinP1I GCGC 3 cut(s) 123, 766, 1716
HincII GTYRAC 2 cut(s) 921, 1030
HindII GTYRAC 2 cut(s) 921, 1030
HindIII AAGCTT 1 cut(s) 236
HpaII CCGG 2 cut(s) 279, 1317
HphI GGTGA 5 cut(s) 54, 533, 901, 1463, 1779
Hpy166II GTNNAC 3 cut(s) 921, 1030, 1206
Hpy188III TCNNGA 8 cut(s) 429, 679, 830, 1317, 1343, 1640, 1647, 1817
Hpy8I GTNNAC 3 cut(s) 921, 1030, 1206
Hpy99I CGWCG 3 cut(s) 148, 426, 846
HpyAV CCTTC 4 cut(s) 75, 619, 1221, 1865
HpyCH4III ACNGT 7 cut(s) 412, 426, 895, 1364, 1516, 1664, 1879
HpyCH4IV ACGT 2 cut(s) 138, 1809
HpyF10VI GCNNNNNNNGC 6 cut(s) 1007, 1046, 1121, 1247, 1724, 1781
HpyF3I CTNAG 8 cut(s) 86, 119, 924, 1167, 1177, 1196, 1470, 1477
HpySE526I ACGT 2 cut(s) 138, 1809
Hsp92I GRCGYC 1 cut(s) 955
HspAI GCGC 3 cut(s) 123, 766, 1716
Kpn2I TCCGGA 1 cut(s) 1316
Kzo9I GATC 6 cut(s) 244, 445, 816, 832, 1617, 1699
LmnI GCTCC 6 cut(s) 511, 763, 858, 1186, 1713, 1799
Lsp1109I GCAGC 5 cut(s) 375, 1079, 1240, 1262, 1830
LweI GCATC 5 cut(s) 264, 649, 1573, 1742, 1793
MaeI CTAG 3 cut(s) 47, 1608, 1817
MaeII ACGT 2 cut(s) 138, 1809
MaeIII GTNAC 6 cut(s) 781, 889, 1148, 1516, 1558, 1621
MalI GATC 6 cut(s) 246, 447, 818, 834, 1619, 1701
MboI GATC 6 cut(s) 244, 445, 816, 832, 1617, 1699
MflI RGATCY 2 cut(s) 832, 1699
MhlI GDGCHC 2 cut(s) 632, 1729
MluCI AATT 5 cut(s) 28, 991, 1414, 1439, 1587
MluI ACGCGT 1 cut(s) 1032
MlyI GAGTC 8 cut(s) 268, 658, 926, 1037, 1150, 1169, 1178, 1403
MmeI TCCRAC 2 cut(s) 438, 1314
Mph1103I ATGCAT 1 cut(s) 688
MroI TCCGGA 1 cut(s) 1316
MroXI GAANNNNTTC 1 cut(s) 465
MseI TTAA 4 cut(s) 15, 26, 1269, 1350
MslI CAYNNNNRTG 2 cut(s) 1741, 1818
MspA1I CMGCKG 3 cut(s) 535, 1070, 1253
MspI CCGG 2 cut(s) 279, 1317
MspR9I CCNGG 2 cut(s) 279, 1602
Mva1269I GAATGC 1 cut(s) 688
MvaI CCWGG 1 cut(s) 1602
MvnI CGCG 2 cut(s) 768, 1034
MwoI GCNNNNNNNGC 6 cut(s) 1007, 1046, 1121, 1247, 1724, 1781
NciI CCSGG 1 cut(s) 279
NcoI CCATGG 2 cut(s) 856, 996
NdeI CATATG 1 cut(s) 9
NdeII GATC 6 cut(s) 244, 445, 816, 832, 1617, 1699
NlaIV GGNNCC 4 cut(s) 630, 1061, 1341, 1701
NmeAIII GCCGAG 3 cut(s) 1025, 1138, 1150
NmuCI GTSAC 3 cut(s) 889, 1516, 1558
NsiI ATGCAT 1 cut(s) 688
NspI RCATGY 1 cut(s) 1149
PaeR7I CTCGAG 1 cut(s) 1791
PceI AGGCCT 1 cut(s) 1475
PciI ACATGT 1 cut(s) 1145
PctI GAATGC 1 cut(s) 688
PdmI GAANNNNTTC 1 cut(s) 465
PfeI GAWTC 6 cut(s) 223, 617, 902, 1320, 1643, 1668
Pfl23II CGTACG 1 cut(s) 769
PflMI CCANNNNNTGG 1 cut(s) 1646
PkrI GCNGC 9 cut(s) 188, 233, 390, 1069, 1123, 1252, 1255, 1575, 1845
PleI GAGTC 8 cut(s) 268, 657, 925, 1037, 1150, 1169, 1177, 1402
PpsI GAGTC 8 cut(s) 268, 657, 925, 1037, 1150, 1169, 1177, 1402
PscI ACATGT 1 cut(s) 1145
PshAI GACNNNNGTC 1 cut(s) 1514
Psp1406I AACGTT 2 cut(s) 138, 1809
Psp6I CCWGG 1 cut(s) 1600
PspFI CCCAGC 1 cut(s) 1063
PspGI CCWGG 1 cut(s) 1600
PspLI CGTACG 1 cut(s) 769
PspN4I GGNNCC 4 cut(s) 630, 1061, 1341, 1701
PspOMI GGGCCC 1 cut(s) 628
PspPI GGNCC 3 cut(s) 628, 629, 774
PspXI VCTCGAGB 1 cut(s) 1791
PstI CTGCAG 1 cut(s) 825
PstNI CAGNNNCTG 2 cut(s) 791, 1646
PsuI RGATCY 2 cut(s) 832, 1699
PvuII CAGCTG 1 cut(s) 1253
RsaI GTAC 3 cut(s) 531, 771, 1839
RsaNI GTAC 3 cut(s) 530, 770, 1838
RseI CAYNNNNRTG 2 cut(s) 1741, 1818
SaqAI TTAA 4 cut(s) 15, 26, 1269, 1350
SatI GCNGC 9 cut(s) 187, 232, 389, 1068, 1122, 1251, 1254, 1574, 1844
Sau3AI GATC 6 cut(s) 244, 445, 816, 832, 1617, 1699
Sau96I GGNCC 3 cut(s) 628, 629, 774
SbfI CCTGCAGG 1 cut(s) 825
SchI GAGTC 8 cut(s) 268, 658, 926, 1037, 1150, 1169, 1178, 1403
ScrFI CCNGG 2 cut(s) 279, 1602
SdaI CCTGCAGG 1 cut(s) 825
SduI GDGCHC 2 cut(s) 632, 1729
SfaNI GCATC 5 cut(s) 264, 649, 1573, 1742, 1793
SfcI CTRYAG 2 cut(s) 821, 1109
Sfr274I CTCGAG 1 cut(s) 1791
SlaI CTCGAG 1 cut(s) 1791
SmiMI CAYNNNNRTG 2 cut(s) 1741, 1818
SmlI CTYRAG 2 cut(s) 392, 1791
SmoI CTYRAG 2 cut(s) 392, 1791
Sse8387I CCTGCAGG 1 cut(s) 825
Sse9I AATT 5 cut(s) 28, 991, 1414, 1439, 1587
SseBI AGGCCT 1 cut(s) 1475
SsiI CCGC 6 cut(s) 187, 232, 533, 1070, 1122, 1574
SspMI CTAG 3 cut(s) 47, 1608, 1817
StuI AGGCCT 1 cut(s) 1475
StyD4I CCNGG 2 cut(s) 277, 1600
StyI CCWWGG 3 cut(s) 515, 856, 996
TaaI ACNGT 7 cut(s) 412, 426, 895, 1364, 1516, 1664, 1879
TaiI ACGT 2 cut(s) 141, 1812
TaqI TCGA 8 cut(s) 327, 334, 368, 430, 706, 844, 977, 1792
TaqII GACCGA 1 cut(s) 1181
TasI AATT 5 cut(s) 28, 991, 1414, 1439, 1587
TauI GCSGC 4 cut(s) 189, 234, 1124, 1576
TfiI GAWTC 6 cut(s) 223, 617, 902, 1320, 1643, 1668
Tru1I TTAA 4 cut(s) 15, 26, 1269, 1350
Tru9I TTAA 4 cut(s) 15, 26, 1269, 1350
TscAI CASTG 2 cut(s) 1109, 1171
TseFI GTSAC 3 cut(s) 889, 1516, 1558
TseI GCWGC 5 cut(s) 388, 1067, 1250, 1253, 1843
Tsp45I GTSAC 3 cut(s) 889, 1516, 1558
TspDTI ATGAA 3 cut(s) 638, 1452, 1802
TspGWI ACGGA 2 cut(s) 67, 830
TspRI CASTG 2 cut(s) 1109, 1171
Van91I CCANNNNNTGG 1 cut(s) 1646
XagI CCTNNNNNAGG 1 cut(s) 130
XapI RAATTY 2 cut(s) 28, 1439
XbaI TCTAGA 1 cut(s) 1816
XceI RCATGY 1 cut(s) 1149
XhoI CTCGAG 1 cut(s) 1791
XmnI GAANNNNTTC 1 cut(s) 465
XspI CTAG 3 cut(s) 47, 1608, 1817
Zsp2I ATGCAT 1 cut(s) 688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.