Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002228

Physical Location & Seq

Genomic Coordinates Reverse (-)

2147524 .. 2152686

Gene Structure 5163 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGCGCCCTACTGTAGCTGGTGATAGTGATGCCTCAACGCTGGGCTCGAAGCAAATTTTTGTAAAACAGTATCTTGTGAAGTGGAAGGGACTATCCTATTTGCATTGTACATGGGTTCCAGAGAAGGAGTTCGTGAAAGCTTTCAAAGCCCATCCACGTTTGAAGACAAAAGTAAATAATTTCCATCGTCAAATGGAATCAAGTAATAACTCTGAGGATGATTTTGTTGCTATTCGACCTGAATGGACTACTGTTGATCGAATTCTGGCCTGCAGGGAAGATGATGAGAAAGAATATTTAGTAAAGTGGAAAGAACTTCCTTATGATGAGTGCTATTGGGAATCTGAATCGGACATAGCTGCGTTTCAGCCGGAAATAGGGAGATTCAACAGAATTCAGTCTAGGTCTCATAAAGTTTTGTCTAGTAAGCAAAAGAGCAGTCTTAGAGATGCCATGGAATCAAAAAATAAGCAGAAAGAGTTTCAACAGTATGAAGGCAGTCCTGATTTTCTTTCTGGAGGCACTCTACATCCTTATCAGCTTGAAGGGTTGAACTTCTTACGTTTCTCCTGGTCCAAACAAACACATGTTATACTTGCAGATGAGATGGGACTTGGCAAAACTATACAGAGTATTGCTTTTTTAGCATCACTTTTTGAAGAGAAAGTCTCTCCACATCTAGTTGTGGCTCCACTTTCAACCTTGAGAAATTGGGAACGGGAATTTGCAACATGGGCACCTCAAATGAATGTGGTTATGTATGTTGGCTCTTCCCAAGCGCGTGCTGTCATACGGGAATATGAATTTTACTTCCCCAAAAATCACAAGAAGATGAAGAAAAAGAAATCTGGTCAAATTGTTAGCGAAAGCAAGCAAGATAGGATCAAATTTGATGTTCTCTTGACATCTTACGAGATGATCAACTTAGACTCAACATCACTGAAACCGATAAAGTGGGAGTGCATGATTGTTGACGAAGGTCATCGTCTGAAAAATAAGGATTCAAAATTATTCTCATCATTACAGCAGTATTCGACTAATCATCGTGTGCTTCTGACCGGAACTCCCCTCCAGAACAATCTGGATGAGCTCTTTATGCTTATGCATTTCCTTGATGCTGGGAAGTTCGGAAGTTTGGAAGAGTTCCAGGAAGAGTTTAAGGATATAAATCAAGAGGAACAAATTTCTCGGCTTCATAGAATGTTGGCTCCCCATCTTCTAAGAAGAGTGAAAAAGGATGTGATGAAGGAACTACCTCCTAAAAAGGAACTGATATTACGTGTTGATTTAAGCAGCAAACAGAAAGAGTATTACAAAGCAATTCTGACCCGTAACTACCAGATACTAACTCGTCGAGGTGGTGCGCAGATATCTCTTATCAATGTGGTTATGGAATTGCGCAAGCTTTGTTATCATCCGTTTATTTTAGATGGAGTTGAACCAGTCATCGCAGATCCAAATGAAGCTTTCAAACAGCTGTTGGAAACTTCTGGGAAATTGCAATTGTTAGACAAAATGATGGTGAAACTAAGGGAGCAAGGGCATAGAGTTCTCATATATTCACAGTTTCAGCACATGCTTGATTTGCTAGAAGACTATTGTACTTTCAAAAAATGGCAGTACGAACGAATAGATGGAAAAGTTGGTGGAGCTGAGAGACAAATAAGAATAGATCGATTTAATGCCAAAAGCTCTTCCAGATTTTGTTTTTTGTTATCCACTCGAGCTGGGGGCTTAGGAATAAACCTTGCAACTGCAGACACAGTGATCATATATGATAGTGATTGGAATCCACATGCTGATCTACAAGCTATGGCAAGAGCTCATCGACTTGGACAAACTAACAAGGTAATGATTTATAGGCTAGTGACCCGAGGAAGCATTGAAGAACGGATGATGGAAATGACAAAGAAGAAAATGGTATTGGAGCATTTGGTTGTTGGAAGGTTAAAGAAACAAGAGATTAACCAGGAAGAGTTAGATGACATCATAAGGTATGGATCGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008283 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009736 GO:0009739 GO:0009755 GO:0009787 GO:0009788 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016043 GO:0019219 GO:0019222 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071840 GO:0080090 GO:0097159 GO:0099402 GO:1901363 GO:1901419 GO:1901420 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905957 GO:1905958 GO:2000023 GO:2000026 GO:2000069 GO:2000112 GO:2000113 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko05165 ko05203 map05165 map05203

Pfam Domains

Protein Families

CHDCT2 Chromo DUF1086 DUF1087 Helicase_C PHD SNF2_N

Protein Analysis

670

Amino Acids

78.06

Weight (kDa)

9.1

Isoelectric Point (pI)

42.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chromo	PF00385	18 - 47	1.3e-08	Chromo (CHRromatin Organisation MOdifier) domain
Chromo	PF00385	84 - 130	4.1e-14	Chromo (CHRromatin Organisation MOdifier) domain
ResIII	PF04851	175 - 356	1.4e-11	Type III restriction enzyme, res subunit
SNF2-rel_dom	PF00176	179 - 474	6e-83	SNF2-related domain
HDA2-3	PF11496	426 - 641	3.1e-11	Class II histone deacetylase complex subunits 2 and 3
Helicase_C	PF00271	499 - 612	1.4e-24	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002228)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25170 AT2G25170 AT2G25170 AT2G25170 AT4G31900 AT4G31900 AT4G31900
fragaria_vesca	FvH4_2g40920
malus_domestica	MD08G1058800.v1.1 MD15G1037700.v1.1
prunus_persica	Prupe.1G391600_v2.0.a1
pyrus_communis	pycom08g04860 pycom08g04870 pycom15g03490
rosa_chinensis	RchiOBHm_Chr3g0455421 RchiOBHm_Chr6g0299661
rosa_laevigata	RLG00000011399 RLG00000025364
rosa_multiflora	Rmu_co8019708.1_g000001 Rmu_co8099568.1_g000001 Rmu_sc0022216.1_g000002 Rmu_sc0024261.1_g000001 Rmu_sc0024262.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424300 Rroxscaffold_7G00168470
rosa_rugosa	Rorug03G0007200 Rorug03G0007300 Rorug03G0007400 Rorug04G0013500 Rorug06G0291400
rosa_samantha	Rh3AG066700 Rh3BG069100 Rh3CG067500 Rh3DG069000 Rh5AG515500 Rh6AG402100 Rh6BG410600 Rh6CG416300 Rh6CG416400 Rh6DG403500
rosa_wichuraiana	Rw2G021110 Rw3G005270 Rw6G035200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1365, 1400
AccB1I	GGYRCC	1 cut(s)	736
AccII	CGCG	1 cut(s)	781
AclWI	GGATC	3 cut(s)	890, 1448, 2008
AcsI	RAATTY	7 cut(s)	54, 261, 393, 722, 803, 887, 1182
AfaI	GTAC	3 cut(s)	109, 1603, 1622
AfiI	CCNNNNNNNGG	1 cut(s)	377
AflIII	ACRYGT	2 cut(s)	586, 1279
AjnI	CCWGG	3 cut(s)	569, 1146, 1968
AjuI	GAANNNNNNNTTGG	2 cut(s)	1907, 1939
Alw21I	GWGCWC	2 cut(s)	1092, 1825
Alw26I	GTCTC	3 cut(s)	411, 673, 1651
AlwI	GGATC	3 cut(s)	890, 1448, 2008
Ama87I	CYCGRG	2 cut(s)	1722, 1872
AoxI	GGCC	1 cut(s)	267
ApeKI	GCWGC	2 cut(s)	359, 1293
ApoI	RAATTY	7 cut(s)	54, 261, 393, 722, 803, 887, 1182
ArsI	GACNNNNNNTTYG	2 cut(s)	424, 456
Asp700I	GAANNNNTTC	2 cut(s)	128, 140
AspLEI	GCGC	4 cut(s)	6, 781, 1366, 1401
AspS9I	GGNCC	1 cut(s)	573
AsuHPI	GGTGA	2 cut(s)	32, 1534
AvaI	CYCGRG	2 cut(s)	1722, 1872
AvaII	GGWCC	1 cut(s)	573
BaeGI	GKGCMC	1 cut(s)	739
BanI	GGYRCC	1 cut(s)	736
BanII	GRGCYC	3 cut(s)	47, 1092, 1825
BbsI	GAAGAC	2 cut(s)	170, 1599
Bbv12I	GWGCWC	2 cut(s)	1092, 1825
BbvI	GCAGC	2 cut(s)	346, 1305
BccI	CCATC	8 cut(s)	159, 192, 601, 1221, 1424, 1513, 1628, 1891
BciT130I	CCWGG	3 cut(s)	571, 1148, 1970
BclI	TGATCA	2 cut(s)	918, 1767
BcoDI	GTCTC	3 cut(s)	411, 673, 1651
BfaI	CTAG	6 cut(s)	402, 423, 680, 1589, 1865, 2008
BfmI	CTRYAG	3 cut(s)	12, 271, 1755
BisI	GCNGC	2 cut(s)	360, 1294
BlsI	GCNGC	2 cut(s)	361, 1295
Bme1390I	CCNGG	3 cut(s)	571, 1148, 1970
Bme18I	GGWCC	1 cut(s)	573
BmeT110I	CYCGRG	2 cut(s)	1722, 1872
BmgT120I	GGNCC	1 cut(s)	573
BmiI	GGNNCC	4 cut(s)	117, 690, 738, 1209
BmrFI	CCNGG	3 cut(s)	571, 1148, 1970
BmsI	GCATC	4 cut(s)	19, 439, 656, 1105
BoxI	GACNNNNGTC	1 cut(s)	978
BpiI	GAAGAC	2 cut(s)	170, 1599
BplI	GAGNNNNNCTC	2 cut(s)	653, 685
BpmI	CTGGAG	2 cut(s)	537, 1055
Bpu10I	CCTNAGC	1 cut(s)	1735
BpuEI	CTTGAG	1 cut(s)	724
Bsa29I	ATCGAT	1 cut(s)	1675
BsaAI	YACGTR	1 cut(s)	1280
BsaBI	GATNNNNATC	2 cut(s)	1167, 1788
BsaI	GGTCTC	1 cut(s)	411
BsaJI	CCNNGG	2 cut(s)	453, 1873
BsaWI	WCCGGW	1 cut(s)	1058
BsaXI	ACNNNNNCTCC	2 cut(s)	1048, 1078
Bsc4I	CCNNNNNNNGG	1 cut(s)	377
Bse1I	ACTGG	1 cut(s)	1442
Bse8I	GATNNNNATC	2 cut(s)	1167, 1788
BseBI	CCWGG	3 cut(s)	571, 1148, 1970
BseCI	ATCGAT	1 cut(s)	1675
BseDI	CCNNGG	2 cut(s)	453, 1873
BseGI	GGATG	7 cut(s)	151, 223, 529, 1090, 1243, 1414, 1899
BseJI	GATNNNNATC	2 cut(s)	1167, 1788
BseLI	CCNNNNNNNGG	1 cut(s)	377
BseMII	CTCAG	2 cut(s)	204, 1644
BseNI	ACTGG	1 cut(s)	1442
BseSI	GKGCMC	1 cut(s)	739
BseXI	GCAGC	2 cut(s)	346, 1305
BseYI	CCCAGC	3 cut(s)	40, 1118, 1727
Bsh1236I	CGCG	1 cut(s)	781
BshFI	GGCC	1 cut(s)	269
BshNI	GGYRCC	1 cut(s)	736
BshVI	ATCGAT	1 cut(s)	1675
BsiHKAI	GWGCWC	2 cut(s)	1092, 1825
BsiHKCI	CYCGRG	2 cut(s)	1722, 1872
BsiSI	CCGG	2 cut(s)	371, 1059
BslFI	GGGAC	2 cut(s)	102, 624
BslI	CCNNNNNNNGG	1 cut(s)	377
BsmAI	GTCTC	3 cut(s)	411, 673, 1651
BsmFI	GGGAC	2 cut(s)	102, 624
BsnI	GGCC	1 cut(s)	269
Bso31I	GGTCTC	1 cut(s)	411
BsoBI	CYCGRG	2 cut(s)	1722, 1872
Bsp1286I	GDGCHC	4 cut(s)	47, 739, 1092, 1825
Bsp1407I	TGTACA	1 cut(s)	107
Bsp143I	GATC	8 cut(s)	256, 882, 918, 1453, 1672, 1767, 1801, 2000
Bsp19I	CCATGG	1 cut(s)	453
BspANI	GGCC	1 cut(s)	269
BspCNI	CTCAG	2 cut(s)	205, 1645
BspDI	ATCGAT	1 cut(s)	1675
BspFNI	CGCG	1 cut(s)	781
BspLI	GGNNCC	4 cut(s)	117, 690, 738, 1209
BspMAI	CTGCAG	2 cut(s)	275, 1759
BspPI	GGATC	3 cut(s)	890, 1448, 2008
BspQI	GCTCTTC	2 cut(s)	775, 1699
BspT107I	GGYRCC	1 cut(s)	736
BspTNI	GGTCTC	1 cut(s)	411
BsrGI	TGTACA	1 cut(s)	107
BsrI	ACTGG	1 cut(s)	1442
BssECI	CCNNGG	2 cut(s)	453, 1873
BssMI	GATC	8 cut(s)	256, 882, 918, 1453, 1672, 1767, 1801, 2000
BssT1I	CCWWGG	1 cut(s)	453
Bst2UI	CCWGG	3 cut(s)	571, 1148, 1970
Bst4CI	ACNGT	6 cut(s)	13, 69, 253, 489, 1566, 1765
Bst6I	CTCTTC	7 cut(s)	654, 775, 1134, 1146, 1219, 1699, 1968
BstAUI	TGTACA	1 cut(s)	107
BstBAI	YACGTR	1 cut(s)	1280
BstC8I	GCNNGC	4 cut(s)	271, 783, 872, 1403
BstDEI	CTNAG	7 cut(s)	213, 443, 925, 1220, 1529, 1653, 1735
BstDSI	CCRYGG	1 cut(s)	453
BstF5I	GGATG	7 cut(s)	151, 223, 529, 1090, 1243, 1414, 1899
BstFNI	CGCG	1 cut(s)	781
BstHHI	GCGC	4 cut(s)	6, 781, 1366, 1401
BstKTI	GATC	8 cut(s)	259, 885, 921, 1456, 1675, 1770, 1804, 2003
BstMAI	GTCTC	3 cut(s)	411, 673, 1651
BstMBI	GATC	8 cut(s)	256, 882, 918, 1453, 1672, 1767, 1801, 2000
BstMWI	GCNNNNNNNGC	5 cut(s)	146, 644, 734, 1096, 1585
BstNI	CCWGG	3 cut(s)	571, 1148, 1970
BstNSI	RCATGY	3 cut(s)	590, 1579, 1799
BstPAI	GACNNNNGTC	1 cut(s)	978
BstSCI	CCNGG	3 cut(s)	569, 1146, 1968
BstSFI	CTRYAG	3 cut(s)	12, 271, 1755
BstSLI	GKGCMC	1 cut(s)	739
BstUI	CGCG	1 cut(s)	781
BstV1I	GCAGC	2 cut(s)	346, 1305
BstV2I	GAAGAC	2 cut(s)	170, 1599
BstX2I	RGATCY	1 cut(s)	1453
BstYI	RGATCY	1 cut(s)	1453
Bsu15I	ATCGAT	1 cut(s)	1675
BsuRI	GGCC	1 cut(s)	269
BsuTUI	ATCGAT	1 cut(s)	1675
BtgI	CCRYGG	1 cut(s)	453
BtgZI	GCGATG	1 cut(s)	1432
BtsCI	GGATG	7 cut(s)	151, 223, 529, 1090, 1243, 1414, 1899
BtsIMutI	CAGTG	2 cut(s)	938, 1770
Cac8I	GCNNGC	4 cut(s)	271, 783, 872, 1403
CfoI	GCGC	4 cut(s)	6, 781, 1366, 1401
Cfr13I	GGNCC	1 cut(s)	573
ClaI	ATCGAT	1 cut(s)	1675
Csp6I	GTAC	3 cut(s)	108, 1602, 1621
CviAII	CATG	7 cut(s)	111, 454, 587, 732, 964, 1576, 1796
CviQI	GTAC	3 cut(s)	108, 1602, 1621
DdeI	CTNAG	7 cut(s)	213, 443, 925, 1220, 1529, 1653, 1735
DpnI	GATC	8 cut(s)	258, 884, 920, 1455, 1674, 1769, 1803, 2002
DpnII	GATC	8 cut(s)	256, 882, 918, 1453, 1672, 1767, 1801, 2000
Eam1104I	CTCTTC	7 cut(s)	654, 775, 1134, 1146, 1219, 1699, 1968
EarI	CTCTTC	7 cut(s)	654, 775, 1134, 1146, 1219, 1699, 1968
Ecl136II	GAGCTC	2 cut(s)	1090, 1823
Eco130I	CCWWGG	1 cut(s)	453
Eco24I	GRGCYC	3 cut(s)	47, 1092, 1825
Eco31I	GGTCTC	1 cut(s)	411
Eco32I	GATATC	1 cut(s)	1371
Eco47I	GGWCC	1 cut(s)	573
Eco53kI	GAGCTC	2 cut(s)	1090, 1823
Eco88I	CYCGRG	2 cut(s)	1722, 1872
EcoICRI	GAGCTC	2 cut(s)	1090, 1823
EcoRI	GAATTC	2 cut(s)	261, 393
EcoRII	CCWGG	3 cut(s)	569, 1146, 1968
EcoRV	GATATC	1 cut(s)	1371
EcoT14I	CCWWGG	1 cut(s)	453
EcoT22I	ATGCAT	1 cut(s)	1107
EcoT38I	GRGCYC	3 cut(s)	47, 1092, 1825
ErhI	CCWWGG	1 cut(s)	453
FaeI	CATG	7 cut(s)	114, 457, 590, 735, 967, 1579, 1799
FaqI	GGGAC	2 cut(s)	102, 624
FatI	CATG	7 cut(s)	110, 453, 586, 731, 963, 1575, 1795
FbaI	TGATCA	2 cut(s)	918, 1767
Fnu4HI	GCNGC	2 cut(s)	360, 1294
FokI	GGATG	7 cut(s)	138, 230, 516, 1097, 1250, 1401, 1906
FriOI	GRGCYC	3 cut(s)	47, 1092, 1825
Fsp4HI	GCNGC	2 cut(s)	360, 1294
FspBI	CTAG	6 cut(s)	402, 423, 680, 1589, 1865, 2008
FspI	TGCGCA	2 cut(s)	1365, 1400
GlaI	GCGC	4 cut(s)	5, 780, 1365, 1400
GluI	GCNGC	2 cut(s)	360, 1294
GsaI	CCCAGC	3 cut(s)	44, 1122, 1731
GsuI	CTGGAG	2 cut(s)	537, 1055
HaeIII	GGCC	1 cut(s)	269
HapII	CCGG	2 cut(s)	371, 1059
HhaI	GCGC	4 cut(s)	6, 781, 1366, 1401
Hin1II	CATG	7 cut(s)	114, 457, 590, 735, 967, 1579, 1799
Hin6I	GCGC	4 cut(s)	4, 779, 1364, 1399
HinP1I	GCGC	4 cut(s)	4, 779, 1364, 1399
HincII	GTYRAC	1 cut(s)	973
HindII	GTYRAC	1 cut(s)	973
HindIII	AAGCTT	3 cut(s)	138, 1403, 1464
HinfI	GANTC	8 cut(s)	197, 341, 347, 384, 458, 929, 1001, 1789
HpaII	CCGG	2 cut(s)	371, 1059
HphI	GGTGA	2 cut(s)	32, 1534
Hpy166II	GTNNAC	1 cut(s)	973
Hpy188I	TCNGA	7 cut(s)	214, 346, 352, 990, 1056, 1130, 1326
Hpy188III	TCNNGA	9 cut(s)	119, 133, 503, 516, 901, 1072, 1082, 1172, 1698
Hpy8I	GTNNAC	1 cut(s)	973
Hpy99I	CGWCG	1 cut(s)	1356
HpyAV	CCTTC	7 cut(s)	79, 118, 488, 539, 971, 1240, 1938
HpyCH4III	ACNGT	6 cut(s)	13, 69, 253, 489, 1566, 1765
HpyCH4IV	ACGT	3 cut(s)	157, 562, 1279
HpyCH4V	TGCA	9 cut(s)	103, 273, 599, 728, 963, 1105, 1501, 1751, 1757
HpyF10VI	GCNNNNNNNGC	5 cut(s)	146, 644, 734, 1096, 1585
HpyF3I	CTNAG	7 cut(s)	213, 443, 925, 1220, 1529, 1653, 1735
HpySE526I	ACGT	3 cut(s)	157, 562, 1279
Hsp92II	CATG	7 cut(s)	114, 457, 590, 735, 967, 1579, 1799
HspAI	GCGC	4 cut(s)	4, 779, 1364, 1399
Ksp22I	TGATCA	2 cut(s)	918, 1767
Kzo9I	GATC	8 cut(s)	256, 882, 918, 1453, 1672, 1767, 1801, 2000
LguI	GCTCTTC	2 cut(s)	775, 1699
LmnI	GCTCC	5 cut(s)	694, 1213, 1534, 1649, 1927
Lsp1109I	GCAGC	2 cut(s)	346, 1305
LweI	GCATC	4 cut(s)	19, 439, 656, 1105
MaeI	CTAG	6 cut(s)	402, 423, 680, 1589, 1865, 2008
MaeII	ACGT	3 cut(s)	157, 562, 1279
MaeIII	GTNAC	2 cut(s)	1331, 1867
MalI	GATC	8 cut(s)	258, 884, 920, 1455, 1674, 1769, 1803, 2002
MboI	GATC	8 cut(s)	256, 882, 918, 1453, 1672, 1767, 1801, 2000
MfeI	CAATTG	1 cut(s)	1502
MflI	RGATCY	1 cut(s)	1453
MhlI	GDGCHC	4 cut(s)	47, 739, 1092, 1825
MlyI	GAGTC	1 cut(s)	923
MmeI	TCCRAC	2 cut(s)	1461, 1921
MnlI	CCTC	9 cut(s)	43, 208, 512, 750, 1079, 1168, 1266, 1349, 1868
Mph1103I	ATGCAT	1 cut(s)	1107
MroXI	GAANNNNTTC	2 cut(s)	128, 140
MseI	TTAA	5 cut(s)	1158, 1289, 1680, 1949, 1965
MspA1I	CMGCKG	1 cut(s)	1477
MspI	CCGG	2 cut(s)	371, 1059
MspR9I	CCNGG	3 cut(s)	571, 1148, 1970
MunI	CAATTG	1 cut(s)	1502
MvaI	CCWGG	3 cut(s)	571, 1148, 1970
MvnI	CGCG	1 cut(s)	781
MwoI	GCNNNNNNNGC	5 cut(s)	146, 644, 734, 1096, 1585
NcoI	CCATGG	1 cut(s)	453
NdeII	GATC	8 cut(s)	256, 882, 918, 1453, 1672, 1767, 1801, 2000
NlaIII	CATG	7 cut(s)	114, 457, 590, 735, 967, 1579, 1799
NlaIV	GGNNCC	4 cut(s)	117, 690, 738, 1209
NmeAIII	GCCGAG	1 cut(s)	1168
NmuCI	GTSAC	1 cut(s)	1867
NsbI	TGCGCA	2 cut(s)	1365, 1400
NsiI	ATGCAT	1 cut(s)	1107
NspI	RCATGY	3 cut(s)	590, 1579, 1799
PaeR7I	CTCGAG	1 cut(s)	1722
PciI	ACATGT	1 cut(s)	586
PciSI	GCTCTTC	2 cut(s)	775, 1699
PcsI	WCGNNNNNNNCGW	1 cut(s)	44
PdmI	GAANNNNTTC	2 cut(s)	128, 140
PfeI	GAWTC	7 cut(s)	197, 341, 347, 384, 458, 1001, 1789
PfoI	TCCNGGA	1 cut(s)	1146
PkrI	GCNGC	2 cut(s)	361, 1295
PleI	GAGTC	1 cut(s)	923
PpsI	GAGTC	1 cut(s)	923
Ppu21I	YACGTR	1 cut(s)	1280
PscI	ACATGT	1 cut(s)	586
PshAI	GACNNNNGTC	1 cut(s)	978
Psp124BI	GAGCTC	2 cut(s)	1092, 1825
Psp6I	CCWGG	3 cut(s)	569, 1146, 1968
PspFI	CCCAGC	3 cut(s)	40, 1118, 1727
PspGI	CCWGG	3 cut(s)	569, 1146, 1968
PspN4I	GGNNCC	4 cut(s)	117, 690, 738, 1209
PspPI	GGNCC	1 cut(s)	573
PspXI	VCTCGAGB	1 cut(s)	1722
PsrI	GAACNNNNNNTAC	2 cut(s)	1260, 1292
PstI	CTGCAG	2 cut(s)	275, 1759
PsuI	RGATCY	1 cut(s)	1453
PvuII	CAGCTG	1 cut(s)	1477
RsaI	GTAC	3 cut(s)	109, 1603, 1622
RsaNI	GTAC	3 cut(s)	108, 1602, 1621
SacI	GAGCTC	2 cut(s)	1092, 1825
SapI	GCTCTTC	2 cut(s)	775, 1699
SaqAI	TTAA	5 cut(s)	1158, 1289, 1680, 1949, 1965
SatI	GCNGC	2 cut(s)	360, 1294
Sau3AI	GATC	8 cut(s)	256, 882, 918, 1453, 1672, 1767, 1801, 2000
Sau96I	GGNCC	1 cut(s)	573
SbfI	CCTGCAGG	1 cut(s)	275
SchI	GAGTC	1 cut(s)	923
ScrFI	CCNGG	3 cut(s)	571, 1148, 1970
SdaI	CCTGCAGG	1 cut(s)	275
SduI	GDGCHC	4 cut(s)	47, 739, 1092, 1825
SfaNI	GCATC	4 cut(s)	19, 439, 656, 1105
SfcI	CTRYAG	3 cut(s)	12, 271, 1755
Sfr274I	CTCGAG	1 cut(s)	1722
SinI	GGWCC	1 cut(s)	573
SlaI	CTCGAG	1 cut(s)	1722
SmlI	CTYRAG	2 cut(s)	703, 1722
SmoI	CTYRAG	2 cut(s)	703, 1722
Sse8387I	CCTGCAGG	1 cut(s)	275
SspI	AATATT	1 cut(s)	296
SspMI	CTAG	6 cut(s)	402, 423, 680, 1589, 1865, 2008
SstI	GAGCTC	2 cut(s)	1092, 1825
StyD4I	CCNGG	3 cut(s)	569, 1146, 1968
StyI	CCWWGG	1 cut(s)	453
TaaI	ACNGT	6 cut(s)	13, 69, 253, 489, 1566, 1765
TaiI	ACGT	3 cut(s)	160, 565, 1282
TaqI	TCGA	9 cut(s)	47, 235, 259, 1034, 1354, 1675, 1723, 1828, 2003
TatI	WGTACW	2 cut(s)	107, 1601
TfiI	GAWTC	7 cut(s)	197, 341, 347, 384, 458, 1001, 1789
Tru1I	TTAA	5 cut(s)	1158, 1289, 1680, 1949, 1965
Tru9I	TTAA	5 cut(s)	1158, 1289, 1680, 1949, 1965
TscAI	CASTG	2 cut(s)	945, 1770
TseFI	GTSAC	1 cut(s)	1867
TseI	GCWGC	2 cut(s)	359, 1293
Tsp45I	GTSAC	1 cut(s)	1867
TspDTI	ATGAA	7 cut(s)	507, 761, 816, 848, 1184, 1259, 1476
TspGWI	ACGGA	2 cut(s)	1407, 1906
TspRI	CASTG	2 cut(s)	945, 1770
VpaK11BI	GGWCC	1 cut(s)	573
XapI	RAATTY	7 cut(s)	54, 261, 393, 722, 803, 887, 1182
XceI	RCATGY	3 cut(s)	590, 1579, 1799
XhoI	CTCGAG	1 cut(s)	1722
XmnI	GAANNNNTTC	2 cut(s)	128, 140
XspI	CTAG	6 cut(s)	402, 423, 680, 1589, 1865, 2008
Zsp2I	ATGCAT	1 cut(s)	1107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.