pycom15g32570

Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0001284
Physical Location & Seq
Reverse (-)
31645575 .. 31647899
2325 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1206 bp
ATGGCTTCGTTTTGGCTGGCCTCTCGCTCTTCACGTAGGTTTCTGAAACCTTCAGTGCCCCTCTCCCGCACCCTATTCGCAGTCTCTTCTTATCACCCAACTACCACCACCGCCAATCCTAACCCTAACCCTTATCAGAACGCAAGCCCGTTGGGCCCATTCAATCAAAGGCACCGTTGGACTCCAGGCTCCGTTGAATTTGATCTCAGACTCTTAGCGAACCTCTCCAGCTCGCCTTCGTCAACCGGTGAGAAGAACGATGGAAATCAGGGCGGCCATGGCACGAAGGCTGAGGCTTCTTGGATCGACTTGTATTTGCCGAGGCAAGCTCGGCCTTATGCTAAGCTCGCTCGCCTCGACCGGCCCATTGGCACCTGGTTGCTCGCTTGGCCTTGTATGTGGTCAATAACATTGGCAGCAAGCCCAGGCCACCTTCCTGATTTTAAGATGATGACACTATTCGGATGTGGCGCTCTGCTTTTGAGGGGTGCTGGATGCACCATAAACGATCTCCTTGACCGGGATATTGATACCATGGTCGCACGCACAAAGTTGCGGCCAGTTGCAAGTGGTGTTTTGACACCCTTTCAGGGACTTTGCTTTCTTGGATTTCAATTGCTTTTGGGTCTTGGGATTCTCCTCCAACTGAATAATTATAGCCGTGTTTTAGGGGCTTCATCTTTGTTGCTAGTTTTCTCCTATCCTCTCATGAAGAGGTTCACATTCTGGCCTCAAGCCTATCTAGGGTTAACCTTCAATTGGGGAGCTTTGTTAGGATGGGCTGCAGTTAAAGGAAGCATTGATCCAGCTGTAGTGCTCCCATTGTACTTTTCTGGAGTATGCTGGACACTTGTGTATGATACGATATATGCACATCAGGACAAGGAAGATGATTTGAAAGTAGGTGTTAAGTCTACGGCTTTGAGATTTGGCGACTCAACTAAGGAGTGGATTACTGGCTTTGGAATTTTGTGCATGAGTAGTCTTGCCCTCAGTGGATATAATGCTGAAATTGGTTTTCTTCTTTCTTCCTTTATGTGTTGGCCTTATTATGCATTTTTGTCGGCTGCTTCTGGACAATTAGCTTGGCAGATATGGACAGCTGACCTTTCATCCCGGGCTGATTGCAATAGAAAATTTGTGTCGAACAAATGGTTTGGTGCTATTATTTTCAGTGGAATCCTGTTTGGAAGACTTTCATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 ko01100 ko01110 map00130 map01100 map01110
Pfam Domains
Protein Families
UbiA

Protein Analysis

402

Amino Acids

44.27

Weight (kDa)

9.39

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UbiA PF01040 129 - 382 2.1e-58 UbiA prenyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 171, 371
AccI GTMKAC 1 cut(s) 914
AciI CCGC 4 cut(s) 67, 111, 273, 556
AclWI GGATC 2 cut(s) 311, 797
AcoI YGGCCR 2 cut(s) 274, 557
AcsI RAATTY 3 cut(s) 197, 966, 1136
AcuI CTGAAG 1 cut(s) 36
AfaI GTAC 1 cut(s) 827
AfiI CCNNNNNNNGG 4 cut(s) 520, 590, 744, 759
AgeI ACCGGT 1 cut(s) 245
AgsI TTSAA 5 cut(s) 163, 197, 614, 757, 898
AjnI CCWGG 3 cut(s) 184, 374, 424
AluBI AGCT 7 cut(s) 231, 329, 346, 767, 809, 1085, 1103
AluI AGCT 7 cut(s) 231, 329, 346, 767, 809, 1085, 1103
Alw21I GWGCWC 1 cut(s) 819
Alw26I GTCTC 1 cut(s) 88
AlwI GGATC 2 cut(s) 311, 797
Ama87I CYCGRG 1 cut(s) 1116
ApaI GGGCCC 1 cut(s) 158
ApeKI GCWGC 3 cut(s) 416, 782, 1067
ApoI RAATTY 3 cut(s) 197, 966, 1136
AsiGI ACCGGT 1 cut(s) 245
Asp700I GAANNNNTTC 2 cut(s) 716, 1195
AspLEI GCGC 1 cut(s) 473
AspS9I GGNCC 3 cut(s) 154, 155, 363
AsuC2I CCSGG 3 cut(s) 521, 1117, 1118
AsuHPI GGTGA 2 cut(s) 86, 260
AvaI CYCGRG 1 cut(s) 1116
BaeGI GKGCMC 2 cut(s) 60, 158
BaeI ACNNNNGTAYC 2 cut(s) 522, 555
BanI GGYRCC 2 cut(s) 171, 371
BanII GRGCYC 1 cut(s) 158
BbsI GAAGAC 1 cut(s) 1198
Bbv12I GWGCWC 1 cut(s) 819
BbvCI CCTCAGC 1 cut(s) 291
BbvI GCAGC 3 cut(s) 428, 769, 1054
BccI CCATC 2 cut(s) 254, 771
BceAI ACGGC 2 cut(s) 645, 933
BcgI CGANNNNNNTGC 4 cut(s) 58, 92, 1044, 1078
BciT130I CCWGG 3 cut(s) 186, 376, 426
BcnI CCSGG 3 cut(s) 521, 1117, 1118
BcoDI GTCTC 1 cut(s) 88
BfaI CTAG 2 cut(s) 689, 743
BfmI CTRYAG 2 cut(s) 783, 810
BfoI RGCGCY 1 cut(s) 474
BglI GCCNNNNNGGC 1 cut(s) 153
BisI GCNGC 5 cut(s) 274, 417, 557, 783, 1068
BlpI GCTNAGC 1 cut(s) 342
BlsI GCNGC 5 cut(s) 275, 418, 558, 784, 1069
Bme1390I CCNGG 6 cut(s) 186, 376, 426, 521, 1117, 1118
BmeT110I CYCGRG 1 cut(s) 1116
BmgT120I GGNCC 3 cut(s) 154, 155, 363
BmiI GGNNCC 4 cut(s) 156, 173, 190, 373
BmrFI CCNGG 6 cut(s) 186, 376, 426, 521, 1117, 1118
BmsI GCATC 1 cut(s) 485
BpiI GAAGAC 1 cut(s) 1198
BplI GAGNNNNNCTC 2 cut(s) 313, 345
BpmI CTGGAG 3 cut(s) 168, 211, 855
Bpu10I CCTNAGC 1 cut(s) 291
Bpu1102I GCTNAGC 1 cut(s) 342
BpuEI CTTGAG 1 cut(s) 717
BpuMI CCSGG 3 cut(s) 521, 1117, 1118
BsaAI YACGTR 1 cut(s) 35
BsaBI GATNNNNATC 1 cut(s) 264
BsaJI CCNNGG 5 cut(s) 277, 320, 424, 534, 1116
BsaWI WCCGGW 1 cut(s) 245
Bsc4I CCNNNNNNNGG 4 cut(s) 520, 590, 744, 759
Bse118I RCCGGY 2 cut(s) 245, 360
Bse1I ACTGG 2 cut(s) 560, 961
Bse8I GATNNNNATC 1 cut(s) 264
BseBI CCWGG 3 cut(s) 186, 376, 426
BseDI CCNNGG 5 cut(s) 277, 320, 424, 534, 1116
BseGI GGATG 4 cut(s) 470, 500, 782, 1112
BseJI GATNNNNATC 1 cut(s) 264
BseLI CCNNNNNNNGG 4 cut(s) 520, 590, 744, 759
BseMII CTCAG 3 cut(s) 220, 282, 1006
BseNI ACTGG 2 cut(s) 560, 961
BseRI GAGGAG 1 cut(s) 629
BseSI GKGCMC 2 cut(s) 60, 158
BseXI GCAGC 3 cut(s) 428, 769, 1054
Bsh1285I CGRYCG 1 cut(s) 361
BshNI GGYRCC 2 cut(s) 171, 371
BshTI ACCGGT 1 cut(s) 245
BsiEI CGRYCG 1 cut(s) 361
BsiHKAI GWGCWC 1 cut(s) 819
BsiHKCI CYCGRG 1 cut(s) 1116
BsiSI CCGG 4 cut(s) 246, 361, 520, 1117
BslFI GGGAC 1 cut(s) 606
BslI CCNNNNNNNGG 4 cut(s) 520, 590, 744, 759
BsmAI GTCTC 1 cut(s) 88
BsmFI GGGAC 1 cut(s) 606
BsoBI CYCGRG 1 cut(s) 1116
Bsp120I GGGCCC 1 cut(s) 154
Bsp1286I GDGCHC 3 cut(s) 60, 158, 819
Bsp143I GATC 4 cut(s) 202, 303, 508, 802
Bsp1720I GCTNAGC 1 cut(s) 342
Bsp19I CCATGG 2 cut(s) 277, 534
BspACI CCGC 4 cut(s) 67, 111, 273, 556
BspCNI CTCAG 3 cut(s) 219, 283, 1005
BspHI TCATGA 1 cut(s) 708
BspLI GGNNCC 4 cut(s) 156, 173, 190, 373
BspMAI CTGCAG 1 cut(s) 787
BspPI GGATC 2 cut(s) 311, 797
BspQI GCTCTTC 1 cut(s) 34
BspT107I GGYRCC 2 cut(s) 171, 371
BsrFI RCCGGY 2 cut(s) 245, 360
BsrI ACTGG 2 cut(s) 560, 961
BssAI RCCGGY 2 cut(s) 245, 360
BssECI CCNNGG 5 cut(s) 277, 320, 424, 534, 1116
BssMI GATC 4 cut(s) 202, 303, 508, 802
BssT1I CCWWGG 2 cut(s) 277, 534
Bst2UI CCWGG 3 cut(s) 186, 376, 426
Bst4CI ACNGT 1 cut(s) 176
Bst6I CTCTTC 3 cut(s) 34, 91, 707
BstBAI YACGTR 1 cut(s) 35
BstC8I GCNNGC 9 cut(s) 18, 145, 233, 327, 348, 352, 384, 421, 544
BstDEI CTNAG 6 cut(s) 206, 214, 291, 342, 942, 992
BstDSI CCRYGG 2 cut(s) 277, 534
BstF5I GGATG 4 cut(s) 470, 500, 782, 1112
BstH2I RGCGCY 1 cut(s) 474
BstHHI GCGC 1 cut(s) 473
BstKTI GATC 4 cut(s) 205, 306, 511, 805
BstMAI GTCTC 1 cut(s) 88
BstMBI GATC 4 cut(s) 202, 303, 508, 802
BstMCI CGRYCG 1 cut(s) 361
BstMWI GCNNNNNNNGC 5 cut(s) 153, 279, 331, 347, 388
BstNI CCWGG 3 cut(s) 186, 376, 426
BstSCI CCNGG 6 cut(s) 184, 374, 424, 519, 1115, 1116
BstSFI CTRYAG 2 cut(s) 783, 810
BstSLI GKGCMC 2 cut(s) 60, 158
BstV1I GCAGC 3 cut(s) 428, 769, 1054
BstV2I GAAGAC 1 cut(s) 1198
BtgI CCRYGG 2 cut(s) 277, 534
BtsCI GGATG 4 cut(s) 470, 500, 782, 1112
BtsIMutI CAGTG 3 cut(s) 60, 1000, 1180
Cac8I GCNNGC 9 cut(s) 18, 145, 233, 327, 348, 352, 384, 421, 544
CciI TCATGA 1 cut(s) 708
CfoI GCGC 1 cut(s) 473
Cfr10I RCCGGY 2 cut(s) 245, 360
Cfr13I GGNCC 3 cut(s) 154, 155, 363
Cfr9I CCCGGG 1 cut(s) 1116
CsiI ACCWGGT 1 cut(s) 374
Csp6I GTAC 1 cut(s) 826
CspAI ACCGGT 1 cut(s) 245
CviAII CATG 4 cut(s) 278, 535, 709, 976
CviQI GTAC 1 cut(s) 826
DdeI CTNAG 6 cut(s) 206, 214, 291, 342, 942, 992
DpnI GATC 4 cut(s) 204, 305, 510, 804
DpnII GATC 4 cut(s) 202, 303, 508, 802
EaeI YGGCCR 2 cut(s) 274, 557
Eam1104I CTCTTC 3 cut(s) 34, 91, 707
EarI CTCTTC 3 cut(s) 34, 91, 707
Eco130I CCWWGG 2 cut(s) 277, 534
Eco24I GRGCYC 1 cut(s) 158
Eco57I CTGAAG 1 cut(s) 36
Eco88I CYCGRG 1 cut(s) 1116
EcoRII CCWGG 3 cut(s) 184, 374, 424
EcoT14I CCWWGG 2 cut(s) 277, 534
EcoT22I ATGCAT 1 cut(s) 1057
EcoT38I GRGCYC 1 cut(s) 158
ErhI CCWWGG 2 cut(s) 277, 534
FaeI CATG 4 cut(s) 281, 538, 712, 979
FaqI GGGAC 1 cut(s) 606
FatI CATG 4 cut(s) 277, 534, 708, 975
FauI CCCGC 1 cut(s) 74
FblI GTMKAC 1 cut(s) 914
Fnu4HI GCNGC 5 cut(s) 274, 417, 557, 783, 1068
FokI GGATG 4 cut(s) 477, 507, 789, 1099
FriOI GRGCYC 1 cut(s) 158
Fsp4HI GCNGC 5 cut(s) 274, 417, 557, 783, 1068
FspBI CTAG 2 cut(s) 689, 743
GlaI GCGC 1 cut(s) 472
GluI GCNGC 5 cut(s) 274, 417, 557, 783, 1068
GsuI CTGGAG 3 cut(s) 168, 211, 855
HaeII RGCGCY 1 cut(s) 474
HapII CCGG 4 cut(s) 246, 361, 520, 1117
HhaI GCGC 1 cut(s) 473
Hin1II CATG 4 cut(s) 281, 538, 712, 979
Hin6I GCGC 1 cut(s) 471
HinP1I GCGC 1 cut(s) 471
HincII GTYRAC 2 cut(s) 243, 750
HindII GTYRAC 2 cut(s) 243, 750
HinfI GANTC 5 cut(s) 181, 210, 634, 935, 1179
HpaI GTTAAC 1 cut(s) 750
HpaII CCGG 4 cut(s) 246, 361, 520, 1117
HphI GGTGA 2 cut(s) 86, 260
Hpy166II GTNNAC 4 cut(s) 243, 720, 750, 915
Hpy188I TCNGA 4 cut(s) 45, 138, 209, 464
Hpy188III TCNNGA 5 cut(s) 437, 709, 834, 878, 1074
Hpy8I GTNNAC 4 cut(s) 243, 720, 750, 915
HpyAV CCTTC 5 cut(s) 60, 246, 280, 443, 763
HpyCH4III ACNGT 1 cut(s) 176
HpyCH4IV ACGT 1 cut(s) 34
HpyCH4V TGCA 7 cut(s) 498, 566, 785, 872, 975, 1055, 1128
HpyF10VI GCNNNNNNNGC 5 cut(s) 153, 279, 331, 347, 388
HpyF3I CTNAG 6 cut(s) 206, 214, 291, 342, 942, 992
HpySE526I ACGT 1 cut(s) 34
Hsp92II CATG 4 cut(s) 281, 538, 712, 979
HspAI GCGC 1 cut(s) 471
KspAI GTTAAC 1 cut(s) 750
Kzo9I GATC 4 cut(s) 202, 303, 508, 802
LguI GCTCTTC 1 cut(s) 34
LmnI GCTCC 3 cut(s) 194, 764, 822
Lsp1109I GCAGC 3 cut(s) 428, 769, 1054
LweI GCATC 1 cut(s) 485
MabI ACCWGGT 1 cut(s) 374
MaeI CTAG 2 cut(s) 689, 743
MaeII ACGT 1 cut(s) 34
MalI GATC 4 cut(s) 204, 305, 510, 804
MboI GATC 4 cut(s) 202, 303, 508, 802
MboII GAAGA 8 cut(s) 21, 78, 265, 724, 899, 1013, 1020, 1203
MfeI CAATTG 2 cut(s) 614, 757
MhlI GDGCHC 3 cut(s) 60, 158, 819
MluCI AATT 8 cut(s) 197, 614, 652, 757, 966, 1011, 1079, 1136
MlyI GAGTC 3 cut(s) 175, 204, 929
MmeI TCCRAC 2 cut(s) 158, 667
Mph1103I ATGCAT 1 cut(s) 1057
MroXI GAANNNNTTC 2 cut(s) 716, 1195
MseI TTAA 4 cut(s) 444, 749, 789, 909
MspA1I CMGCKG 2 cut(s) 809, 1103
MspI CCGG 4 cut(s) 246, 361, 520, 1117
MspR9I CCNGG 6 cut(s) 186, 376, 426, 521, 1117, 1118
MunI CAATTG 2 cut(s) 614, 757
MvaI CCWGG 3 cut(s) 186, 376, 426
MwoI GCNNNNNNNGC 5 cut(s) 153, 279, 331, 347, 388
NciI CCSGG 3 cut(s) 521, 1117, 1118
NcoI CCATGG 2 cut(s) 277, 534
NdeII GATC 4 cut(s) 202, 303, 508, 802
NlaIII CATG 4 cut(s) 281, 538, 712, 979
NlaIV GGNNCC 4 cut(s) 156, 173, 190, 373
NmeAIII GCCGAG 2 cut(s) 310, 345
NsiI ATGCAT 1 cut(s) 1057
PagI TCATGA 1 cut(s) 708
PciSI GCTCTTC 1 cut(s) 34
PcsI WCGNNNNNNNCGW 2 cut(s) 31, 354
PdmI GAANNNNTTC 2 cut(s) 716, 1195
PfeI GAWTC 2 cut(s) 634, 1179
PinAI ACCGGT 1 cut(s) 245
PkrI GCNGC 5 cut(s) 275, 418, 558, 784, 1069
PleI GAGTC 3 cut(s) 175, 204, 929
PpsI GAGTC 3 cut(s) 175, 204, 929
Ppu21I YACGTR 1 cut(s) 35
Psp6I CCWGG 3 cut(s) 184, 374, 424
PspGI CCWGG 3 cut(s) 184, 374, 424
PspN4I GGNNCC 4 cut(s) 156, 173, 190, 373
PspOMI GGGCCC 1 cut(s) 154
PspPI GGNCC 3 cut(s) 154, 155, 363
PstI CTGCAG 1 cut(s) 787
PvuII CAGCTG 2 cut(s) 809, 1103
RsaI GTAC 1 cut(s) 827
RsaNI GTAC 1 cut(s) 826
SapI GCTCTTC 1 cut(s) 34
SaqAI TTAA 4 cut(s) 444, 749, 789, 909
SatI GCNGC 5 cut(s) 274, 417, 557, 783, 1068
Sau3AI GATC 4 cut(s) 202, 303, 508, 802
Sau96I GGNCC 3 cut(s) 154, 155, 363
SchI GAGTC 3 cut(s) 175, 204, 929
ScrFI CCNGG 6 cut(s) 186, 376, 426, 521, 1117, 1118
SduI GDGCHC 3 cut(s) 60, 158, 819
SexAI ACCWGGT 1 cut(s) 374
SfaNI GCATC 1 cut(s) 485
SfcI CTRYAG 2 cut(s) 783, 810
SmaI CCCGGG 1 cut(s) 1118
SmlI CTYRAG 1 cut(s) 732
SmoI CTYRAG 1 cut(s) 732
Sse9I AATT 8 cut(s) 197, 614, 652, 757, 966, 1011, 1079, 1136
SsiI CCGC 4 cut(s) 67, 111, 273, 556
SspMI CTAG 2 cut(s) 689, 743
StyD4I CCNGG 6 cut(s) 184, 374, 424, 519, 1115, 1116
StyI CCWWGG 2 cut(s) 277, 534
TaaI ACNGT 1 cut(s) 176
TaiI ACGT 1 cut(s) 37
TaqI TCGA 3 cut(s) 306, 357, 1145
TasI AATT 8 cut(s) 197, 614, 652, 757, 966, 1011, 1079, 1136
TatI WGTACW 1 cut(s) 825
TauI GCSGC 2 cut(s) 276, 559
TfiI GAWTC 2 cut(s) 634, 1179
Tru1I TTAA 4 cut(s) 444, 749, 789, 909
Tru9I TTAA 4 cut(s) 444, 749, 789, 909
TscAI CASTG 3 cut(s) 60, 1000, 1180
TseI GCWGC 3 cut(s) 416, 782, 1067
TspDTI ATGAA 4 cut(s) 666, 725, 1101, 1188
TspGWI ACGGA 1 cut(s) 181
TspMI CCCGGG 1 cut(s) 1116
TspRI CASTG 3 cut(s) 60, 1000, 1180
XapI RAATTY 3 cut(s) 197, 966, 1136
XmaI CCCGGG 1 cut(s) 1116
XmiI GTMKAC 1 cut(s) 914
XmnI GAANNNNTTC 2 cut(s) 716, 1195
XspI CTAG 2 cut(s) 689, 743
Zsp2I ATGCAT 1 cut(s) 1057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.