pycom17g27220

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
25511202 .. 25512841
1640 bp
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UTR
Exon/CDS
Intron
pycom17g27220.1

Sequence Viewer

Length: 513 bp
ATGACTTTTGATAATGAGGATGATGGATATAATTACTACAATGCATATGGTAGAAGGGTTGGATTTAGCGTGAGAAAGAACAGAGAGAATAAGGACAGGTCAGGTATGACAACAACACAAAGAATTGAAAGCATGAACAAGTTTTTGAAAAAGTATTTTGCTCGAAACCTCCTTTTGCAAGAGTTCGTCGTCCAATATGATAAAGCAGTACCGGATCGAAAAGAAAAGGAAAGACAAGTAGAAAATGCAACTAAACAGAAATGGCGTAGTTCGTATTCTGATTGGAATGTGGAGATTGAAGCAACAAAGCAGTATACAAGTAAGATTTTTTATTGTTTCCAAGAGCAGGTTAAGAAAGTTTTAAATTTGAGGCCACTGAAATTAGAAAGTGATGATGGGCAAACACGTACATACATAGTAATGAACTCAGGAAAACGAGGAATTAATAGAACACTTATGTATGACCTTGCAAATCAAATAGTATTGTGCAGTTGCAAAAAAGTTTTAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

171

Amino Acids

20.24

Weight (kDa)

9.55

Isoelectric Point (pI)

45.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 337
AccI GTMKAC 1 cut(s) 314
AclWI GGATC 1 cut(s) 222
AcsI RAATTY 1 cut(s) 364
AfaI GTAC 2 cut(s) 210, 409
AfiI CCNNNNNNNGG 1 cut(s) 346
AflIII ACRYGT 1 cut(s) 404
AgsI TTSAA 3 cut(s) 128, 148, 299
AlwI GGATC 1 cut(s) 222
AoxI GGCC 1 cut(s) 371
ApoI RAATTY 1 cut(s) 364
AseI ATTAAT 1 cut(s) 444
BccI CCATC 2 cut(s) 17, 389
BfuAI ACCTGC 1 cut(s) 337
BsaAI YACGTR 1 cut(s) 407
BsaWI WCCGGW 1 cut(s) 211
Bsc4I CCNNNNNNNGG 1 cut(s) 346
BseGI GGATG 1 cut(s) 25
BseLI CCNNNNNNNGG 1 cut(s) 346
BseMII CTCAG 1 cut(s) 441
BsgI GTGCAG 1 cut(s) 508
BshFI GGCC 1 cut(s) 373
BsiSI CCGG 1 cut(s) 212
BslI CCNNNNNNNGG 1 cut(s) 346
BsnI GGCC 1 cut(s) 373
Bsp143I GATC 1 cut(s) 214
BspANI GGCC 1 cut(s) 373
BspCNI CTCAG 1 cut(s) 440
BspMI ACCTGC 1 cut(s) 337
BspPI GGATC 1 cut(s) 222
BssMI GATC 1 cut(s) 214
BssNAI GTATAC 1 cut(s) 315
Bst1107I GTATAC 1 cut(s) 315
BstBAI YACGTR 1 cut(s) 407
BstDEI CTNAG 1 cut(s) 427
BstF5I GGATG 1 cut(s) 25
BstKTI GATC 1 cut(s) 217
BstMBI GATC 1 cut(s) 214
BstZ17I GTATAC 1 cut(s) 315
BsuRI GGCC 1 cut(s) 373
BtsCI GGATG 1 cut(s) 25
BtsIMutI CAGTG 1 cut(s) 374
BveI ACCTGC 1 cut(s) 337
Csp6I GTAC 2 cut(s) 209, 408
CviAII CATG 1 cut(s) 133
CviJI RGCY 1 cut(s) 373
CviKI_1 RGCY 1 cut(s) 373
CviQI GTAC 2 cut(s) 209, 408
DdeI CTNAG 1 cut(s) 427
DpnI GATC 1 cut(s) 216
DpnII GATC 1 cut(s) 214
DraI TTTAAA 1 cut(s) 363
EcoT22I ATGCAT 1 cut(s) 46
FaeI CATG 1 cut(s) 136
FatI CATG 1 cut(s) 132
FauNDI CATATG 1 cut(s) 46
FblI GTMKAC 1 cut(s) 314
FokI GGATG 1 cut(s) 32
HaeIII GGCC 1 cut(s) 373
HapII CCGG 1 cut(s) 212
Hin1II CATG 1 cut(s) 136
HpaII CCGG 1 cut(s) 212
Hpy166II GTNNAC 1 cut(s) 315
Hpy188I TCNGA 1 cut(s) 280
Hpy188III TCNNGA 1 cut(s) 429
Hpy8I GTNNAC 1 cut(s) 315
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 1 cut(s) 48
HpyCH4IV ACGT 1 cut(s) 406
HpyCH4V TGCA 6 cut(s) 44, 178, 248, 470, 489, 495
HpyF3I CTNAG 1 cut(s) 427
HpySE526I ACGT 1 cut(s) 406
Hsp92II CATG 1 cut(s) 136
Kzo9I GATC 1 cut(s) 214
LpnPI CCDG 5 cut(s) 82, 87, 225, 332, 414
MaeII ACGT 1 cut(s) 406
MalI GATC 1 cut(s) 216
MboI GATC 1 cut(s) 214
MluCI AATT 5 cut(s) 31, 123, 364, 380, 441
MmeI TCCRAC 1 cut(s) 40
MnlI CCTC 4 cut(s) 10, 179, 363, 431
Mph1103I ATGCAT 1 cut(s) 46
MseI TTAA 3 cut(s) 351, 362, 444
MslI CAYNNNNRTG 1 cut(s) 419
MspI CCGG 1 cut(s) 212
NdeI CATATG 1 cut(s) 46
NdeII GATC 1 cut(s) 214
NlaIII CATG 1 cut(s) 136
NsiI ATGCAT 1 cut(s) 46
Ppu21I YACGTR 1 cut(s) 407
PshBI ATTAAT 1 cut(s) 444
RsaI GTAC 2 cut(s) 210, 409
RsaNI GTAC 2 cut(s) 209, 408
RseI CAYNNNNRTG 1 cut(s) 419
SaqAI TTAA 3 cut(s) 351, 362, 444
Sau3AI GATC 1 cut(s) 214
SetI ASST 6 cut(s) 101, 106, 171, 351, 409, 468
SmiMI CAYNNNNRTG 1 cut(s) 419
Sse9I AATT 5 cut(s) 31, 123, 364, 380, 441
TaiI ACGT 1 cut(s) 409
TaqI TCGA 2 cut(s) 163, 217
TasI AATT 5 cut(s) 31, 123, 364, 380, 441
Tru1I TTAA 3 cut(s) 351, 362, 444
Tru9I TTAA 3 cut(s) 351, 362, 444
TscAI CASTG 1 cut(s) 381
TspDTI ATGAA 2 cut(s) 149, 437
TspRI CASTG 1 cut(s) 381
VspI ATTAAT 1 cut(s) 444
XapI RAATTY 1 cut(s) 364
XmiI GTMKAC 1 cut(s) 314
Zsp2I ATGCAT 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.