Rorug06G0247300

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002145
Physical Location & Seq
Reverse (-)
39371185 .. 39387943
16759 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0247300.1

Sequence Viewer

Length: 3873 bp
ATGACGTCGTTTCTGGCTCTCCTCGCCGCTCTTTCCTTCTTACAGCTGCTCTTCTTTGGACCTTCGTTGAGTGCAGAGAAGACTGTCTCGCCTGGTCTTCTCACTTCTGACGTCACTTCTCGGAAAACACACTCGGAAGACTACTGTGCAATGTATGATATATGTGGAGAACGCAGTGATGGCAAAGTCTTGAATTGCCCTTATGGTTCCCCCTCTGTGAAGCCTGACGAGCTATTTTCTGCCAAAATCCAAAGTTTGTGTCCAACTATAAGTGGAAATGTTTGTTGCACTGAGCTTCAGTTTGAAACGTTGCGAGCACAGGTTCAACAAGCAATTCCATTTCTTGTAGGCTGTCCAGCATGCTTGAGGAATTTCCTAAATTTGTTTTGTGAACTATCTTGCTCTCCAAAGCAGAGTCTGTTTATCAATGTGACTTCTATCTCCGAGGTTAGTGGCAATATGACTGTGGATGGGATCGACTATTACATATCTGACACTTTTGGAAAAGGACTGTACAACTCGTGTAAGGATGTTAAATTTGGTACTATGAACACACGGGCCATAGAATTTATTGGTGCTGGTGCTAAAAATTTTAAAGAATGGTTTGATTTTCTTGGTGAGAAAGCAGCCCCTGGTTTCCCTGGTTCACCTTATGCCATTGACTTCAAGTTAACCGTTCCCGAGTCATCTAATATGGAGCTCATGAACGTGTCAGTTTATTCATGTGCTGACACTTCACTAGGCTGCTCTTGTGGTGATTGCCCTTCATCTCCTGCGTGTTCTAATTCTGAACCTCCTCCACACAAGAAAGAGCAATGCTCCATAAAAATTCTATCTATTGAGATCAAATGCATTGATATTTCAGTAGCCGTCATGTATATTCTTTTAGTTTTTGCATTCTTTGTTTGGGGCTTGTTTTATCGGAAAAGAGAAAGAAGGAGAGCTGGATCTACTAAGGAACCACTGTTGAGTGCCATTGATGATGATGATATCAACCCTGTTAACTTACAAAAGGATGAAAGTTTTGCCAGAAAGGGGCATGAGGTGGATCCTCAAGTTACAGAAGAGGTTGAACTATCTTTTATTCAGGAATATATGTCAAGCTTTTTCAGGAGATATGGAATCTGGGTTTCTAGAAATCCCACTCTTGTGCTCTTTTCCTCGGTGGGGATTGTTCTTATACTCTGTATAGGTCTAGTTCGTTTCCAGGTGGAGACACGGCCAGAGAAGCTGTGGGTAGGTCCTGGCAGCAAGGCAGCGGAGGAGAAACAATTCTTTGACAGACATCTTGCTCCCTTCTACAGAATTGAGCAGCTCATTATAGCAACTGTCCCAGATTCAAAGCATGGCGAGTCACCCAGTATTGTCACAGATGACAATATTCTATTACTTTTTGACATACAAGACAAGGTTGACGGAATTCGTGCTAATTATTCTGGCTCAGCGGTAGCTTTAACTGAAATTTGCTTGAAGCCTATTGGCCAAGATTGTGCCACTCAAAGCATTTTGCAGTATTTTAAAATGGACCCTGAAAATTTTGACATCTATGGAGGAGTTGTACATGCCGAGTATTGCTTTCAGCATTATTCTTCTGCAGAAACATGTTTAAGTGCCTTTCAGGCTCCACTTGATCCAAGCACTGCCTTGGGAGGGTTCTCTGGAAACAACTATTCTGAGGCTTCTGCATTCGTAGTCACCTACCCAGTTAATAATGCAGTTGATGATGTAGGAAATGAGAATGGGAAGGCACTGGCTTGGGAGAAGGCTTTTATTCAGTTAGCAAAGGATGAACTGCTGCCAATGGTGCTGTCTCGGAATCTGACTCTCTCATTTTCGGCCGAAAGTTCAATTGAGGAAGAGTTAAAAAGAGAAAGTACCGCAGATGTTATAACCATAATAGTAAGCTATCTGGTAATGTTTCTGTATATATCTCTGACATTGGGAGATGCACCTCAAATATCTTCTCTTTACCTCTCATCCAAGGTCCTGCTTGGTTTGTCAGGAGTATTGCTTGTAATGCTTTCTGTTCTTGGATCTGTTGGATTTTTCAGTGCTGTGGGAGTTAAATCTACATTAATCATAATGGAAGTCATTCCTTTCCTTGTTTTGGCTGTTGGTGTAGATAACATGTGTATATTGGTACATGCTGTGAAACGGCAATCACCGGAGTTACCTTTAGAAAGACGAATAAGTAATGCACTGGTTGAAGTTGGCCCATCCATAACACTGGCTAGTTTGTCTGAGGTTTTGGCCTTTGCGGTGGGAAGCTTCATTCCTATGCCAGCATGCCGAGTCTTCTCCATGTTTGCAGCTCTTGCTGTTTTGCTGGACTTCTTTCTGCAAGTTACTGCATTTGTTGCATTGATATACTTTGACTTTTTGAGAGCTGAGGATGGCAGGGTTGATTGTTTTCCATGCATAAAAGTCTCGTCATCCTTTGTGGAATCCACTGAAGGAATCTATCATGGAAGAACTGGATTGTTGGCTCGCTATATGAAGGAAGTGCATGCATGTATTCTTGATTCATGGGTGGTTAAGATGGTTATCGTTGCTATCTTTGTTGGTTTTACCTGGGCAAGCATTGCATTATGTTCTAGGATTGAAACAGGTTTGGAGCAGCAGATTGTCCTTCCCCGGGACTCTTACCTCCAGGGGTATTTCAATAGTATCTCAGAGTATCTCAGGGTTGGACCACCATTATACTTTGTTGTAAAGGATTACAACTACAGCTCAGAATCAAGACATACAAACCAGTTATGCTCCATTAGCCAATGTGAATCGAACTCTCTTTTGAATGAGATATCAAGAGCTTCTTTAACACCAGAATCAAGCTACATTGCTAAGCCAGCTGCCTCTTGGCTTGATGATTTTCTTGTATGGATATCCCCCGAGGCTTTTGGTTGCTGTCGGAAGTTTTTAAATGCTTCTTATTGTCCACCTGATGACCAGCCACCTTGCTGTTCACCTGATGATGGACCTTGTGGCCTTGGTGGAGTGTGCAAAGATTGTACAACTTGCTTTCGCCACTCAGATTTGATTGATGATCGTCCATCTACAGCACAATTTAGAGAGAAGCTTCCTTGGTTCCTTAATGCACTGCCATCCGCTGATTGCGCAAAAGGAGGCCATGGTGCTTACACTAATAGTGTGGATCTCAATGGTTATGGAAATGGCATTATAAGAGCGTCCGAGTTTCGCACCTATCACACGCCACTTAACAAACAAGGTGATTATGTAAATTCAATGAGAGCAGCACGGGAGTTCAGCTCAAGAATGTCTGATTCCTTAAAGATGGATATCTTTCCATACTCGGTGTTCTACATCTTCTTTGAGCAATATCTGGATATATGGAGAATAGCTTTGATCAACATTGCTATAGCTCTTGGTGCAATCTTCCTTGTCTGTCTGCTTATCACTTCCAGCTTATGGAGTTCAGCAATTCTCATACTTGTATTGGCAATGATTGTTGTGGACCTAATGGGAGTGATGGCCATTTTGGATATCCAACTAAATGCGGTTTCTGTAGTAAATCTCATAATGTCGATCGGAATTGCTGTCGAGTTCTGTGTTCATATAACACATGCTTACTTGGTGAACCATGGGGACAGAAACCAACGAGCAAAGAAAGCTCTAACTAAAGTTGGACCTTCTGTGTTCAGTGGAATCACACTTACAAAGCTAGTTGGAGTGATTGTCCTTTGCTTCTCAAGATCAGAAATTTTTGTGGTTTATTATTTCCAAATGTACCTGGCGTTGGTTGTTATTGGTTTCTTGCATGGGCTTGTATTTTTACCAGTGGTGTTGAGCATGTTTGGTCCACTGCAGAGGCTTACAAATTTTGAGATTCAAGAAGTAGAATCTCATCAAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

1290

Amino Acids

142.34

Weight (kDa)

5.11

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPC1_N PF16414 47 - 278 2.3e-65 Niemann-Pick C1 N terminus
NPC1_MLD PF22314 423 - 614 2.8e-35 NPC1, middle luminal domain
Patched PF02460 637 - 789 1.5e-32 Patched SSD
Sterol-sensing PF12349 659 - 808 8.5e-47 Sterol-sensing domain of SREBP cleavage-activation
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1889, 3179
AatII GACGTC 2 cut(s) 8, 114
Acc16I TGCGCA 1 cut(s) 3115
AccB7I CCANNNNNTGG 1 cut(s) 3426
AccBSI CCGCTC 1 cut(s) 29
AciI CCGC 7 cut(s) 27, 1259, 1445, 1878, 2258, 3105, 3515
AclI AACGTT 1 cut(s) 308
AclWI GGATC 7 cut(s) 482, 955, 1043, 1056, 1625, 2041, 3159
AcoI YGGCCR 4 cut(s) 1220, 1480, 1836, 3489
AcuI CTGAAG 2 cut(s) 281, 2472
AcyI GRCGYC 2 cut(s) 5, 111
AfaI GTAC 7 cut(s) 515, 544, 1560, 1876, 2142, 3010, 3746
AfiI CCNNNNNNNGG 8 cut(s) 1035, 1167, 1650, 2107, 2635, 2972, 3426, 3754
AflIII ACRYGT 3 cut(s) 708, 1601, 2127
AjnI CCWGG 8 cut(s) 91, 631, 640, 1206, 1243, 2570, 2649, 3747
AleI CACNNNNGTG 1 cut(s) 1148
Alw21I GWGCWC 3 cut(s) 319, 702, 1155
Alw26I GTCTC 4 cut(s) 91, 1208, 1815, 2431
AlwI GGATC 7 cut(s) 482, 955, 1043, 1056, 1625, 2041, 3159
AlwNI CAGNNNCTG 2 cut(s) 418, 632
Ama87I CYCGRG 3 cut(s) 680, 2634, 2888
AoxI GGCC 9 cut(s) 558, 1220, 1480, 1836, 2212, 2250, 2983, 3124, 3489
ArsI GACNNNNNNTTYG 2 cut(s) 244, 276
AseI ATTAAT 1 cut(s) 2075
Asp700I GAANNNNTTC 2 cut(s) 1271, 2091
AspLEI GCGC 1 cut(s) 3116
AsuC2I CCSGG 2 cut(s) 2635, 2636
AsuHPI GGTGA 9 cut(s) 629, 639, 767, 1347, 1687, 2154, 2955, 3239, 3604
AvaI CYCGRG 3 cut(s) 680, 2634, 2888
AvaII GGWCC 9 cut(s) 59, 1241, 1525, 1984, 2690, 2975, 3472, 3644, 3815
BalI TGGCCA 2 cut(s) 1482, 3491
BamHI GGATCC 1 cut(s) 1048
BanII GRGCYC 1 cut(s) 702
BauI CACGAG 1 cut(s) 520
BbsI GAAGAC 4 cut(s) 86, 89, 144, 2287
Bbv12I GWGCWC 3 cut(s) 319, 702, 1155
BbvCI CCTCAGC 1 cut(s) 2388
BceAI ACGGC 3 cut(s) 854, 1235, 2171
BciT130I CCWGG 8 cut(s) 93, 633, 642, 1208, 1245, 2572, 2651, 3749
BclI TGATCA 1 cut(s) 3363
BcnI CCSGG 2 cut(s) 2635, 2636
BcoDI GTCTC 4 cut(s) 91, 1208, 1815, 2431
BfaI CTAG 6 cut(s) 740, 1134, 1196, 2232, 2595, 3680
BfmI CTRYAG 7 cut(s) 1300, 1593, 2725, 3054, 3375, 3522, 3821
BglI GCCNNNNNGGC 1 cut(s) 1619
BlpI GCTNAGC 2 cut(s) 1441, 2841
Bme18I GGWCC 9 cut(s) 59, 1241, 1525, 1984, 2690, 2975, 3472, 3644, 3815
BmeT110I CYCGRG 3 cut(s) 680, 2634, 2888
BmiI GGNNCC 6 cut(s) 208, 960, 1050, 1527, 1623, 3086
BmrI ACTGGG 2 cut(s) 1353, 1697
BmsI GCATC 1 cut(s) 1936
BmuI ACTGGG 2 cut(s) 1353, 1697
BpiI GAAGAC 4 cut(s) 86, 89, 144, 2287
BplI GAGNNNNNCTC 4 cut(s) 803, 835, 3251, 3283
BpmI CTGGAG 1 cut(s) 2633
Bpu10I CCTNAGC 1 cut(s) 2388
Bpu1102I GCTNAGC 2 cut(s) 1441, 2841
BpuEI CTTGAG 4 cut(s) 385, 1038, 3253, 3691
BpuMI CCSGG 2 cut(s) 2635, 2636
BsaBI GATNNNNATC 2 cut(s) 2543, 3296
BsaHI GRCGYC 2 cut(s) 5, 111
BsaWI WCCGGW 1 cut(s) 2164
BsaXI ACNNNNNCTCC 4 cut(s) 1542, 1572, 3678, 3708
Bsc4I CCNNNNNNNGG 8 cut(s) 1035, 1167, 1650, 2107, 2635, 2972, 3426, 3754
Bse1I ACTGG 8 cut(s) 1359, 1703, 1755, 2205, 2232, 2479, 2752, 3794
Bse3DI GCAATG 6 cut(s) 156, 821, 2580, 2835, 3369, 3465
Bse8I GATNNNNATC 2 cut(s) 2543, 3296
BseBI CCWGG 8 cut(s) 93, 633, 642, 1208, 1245, 2572, 2651, 3749
BseGI GGATG 9 cut(s) 475, 535, 1021, 1792, 1976, 2216, 2398, 2432, 3101
BseJI GATNNNNATC 2 cut(s) 2543, 3296
BseLI CCNNNNNNNGG 8 cut(s) 1035, 1167, 1650, 2107, 2635, 2972, 3426, 3754
BseMI GCAATG 6 cut(s) 156, 821, 2580, 2835, 3369, 3465
BseMII CTCAG 9 cut(s) 282, 1455, 1665, 2232, 2379, 2685, 2695, 2745, 3042
BseNI ACTGG 8 cut(s) 1359, 1703, 1755, 2205, 2232, 2479, 2752, 3794
BseRI GAGGAG 4 cut(s) 11, 786, 1277, 1566
BseX3I CGGCCG 1 cut(s) 1836
BsgI GTGCAG 1 cut(s) 93
Bsh1285I CGRYCG 2 cut(s) 1839, 3546
BshFI GGCC 9 cut(s) 560, 1222, 1482, 1838, 2214, 2252, 2985, 3126, 3491
BsiEI CGRYCG 2 cut(s) 1839, 3546
BsiHKAI GWGCWC 3 cut(s) 319, 702, 1155
BsiHKCI CYCGRG 3 cut(s) 680, 2634, 2888
BsiSI CCGG 2 cut(s) 2165, 2635
BslFI GGGAC 3 cut(s) 1316, 2651, 3617
BslI CCNNNNNNNGG 8 cut(s) 1035, 1167, 1650, 2107, 2635, 2972, 3426, 3754
BsmAI GTCTC 4 cut(s) 91, 1208, 1815, 2431
BsmFI GGGAC 3 cut(s) 1316, 2651, 3617
BsmI GAATGC 2 cut(s) 896, 1685
BsnI GGCC 9 cut(s) 560, 1222, 1482, 1838, 2214, 2252, 2985, 3126, 3491
BsoBI CYCGRG 3 cut(s) 680, 2634, 2888
Bsp1286I GDGCHC 3 cut(s) 319, 702, 1155
Bsp1407I TGTACA 3 cut(s) 513, 1558, 3008
Bsp1720I GCTNAGC 2 cut(s) 1441, 2841
Bsp19I CCATGG 2 cut(s) 3127, 3598
BspACI CCGC 7 cut(s) 27, 1259, 1445, 1878, 2258, 3105, 3515
BspANI GGCC 9 cut(s) 560, 1222, 1482, 1838, 2214, 2252, 2985, 3126, 3491
BspCNI CTCAG 9 cut(s) 283, 1454, 1666, 2233, 2380, 2684, 2694, 2744, 3041
BspHI TCATGA 1 cut(s) 702
BspLI GGNNCC 6 cut(s) 208, 960, 1050, 1527, 1623, 3086
BspMAI CTGCAG 2 cut(s) 1597, 3825
BspPI GGATC 7 cut(s) 482, 955, 1043, 1056, 1625, 2041, 3159
BspQI GCTCTTC 1 cut(s) 56
BsrBI CCGCTC 1 cut(s) 29
BsrDI GCAATG 6 cut(s) 156, 821, 2580, 2835, 3369, 3465
BsrGI TGTACA 3 cut(s) 513, 1558, 3008
BsrI ACTGG 8 cut(s) 1359, 1703, 1755, 2205, 2232, 2479, 2752, 3794
BssNI GRCGYC 2 cut(s) 5, 111
BssSI CACGAG 1 cut(s) 520
BssT1I CCWWGG 6 cut(s) 1644, 1980, 2986, 3080, 3127, 3598
Bst2BI CACGAG 1 cut(s) 520
Bst2UI CCWGG 8 cut(s) 93, 633, 642, 1208, 1245, 2572, 2651, 3749
Bst4CI ACNGT 7 cut(s) 85, 146, 466, 513, 676, 966, 1330
Bst6I CTCTTC 3 cut(s) 56, 1059, 1851
BstACI GRCGYC 2 cut(s) 5, 111
BstAPI GCANNNNNTGC 3 cut(s) 2315, 2357, 2582
BstAUI TGTACA 3 cut(s) 513, 1558, 3008
BstC8I GCNNGC 8 cut(s) 315, 361, 2283, 2287, 2488, 2508, 2578, 2847
BstDSI CCRYGG 2 cut(s) 3127, 3598
BstF5I GGATG 9 cut(s) 475, 535, 1021, 1792, 1976, 2216, 2398, 2432, 3101
BstHHI GCGC 1 cut(s) 3116
BstMAI GTCTC 4 cut(s) 91, 1208, 1815, 2431
BstMCI CGRYCG 2 cut(s) 1839, 3546
BstNI CCWGG 8 cut(s) 93, 633, 642, 1208, 1245, 2572, 2651, 3749
BstSFI CTRYAG 7 cut(s) 1300, 1593, 2725, 3054, 3375, 3522, 3821
BstV2I GAAGAC 4 cut(s) 86, 89, 144, 2287
BstX2I RGATCY 4 cut(s) 947, 1048, 2033, 3151
BstXI CCANNNNNNTGG 1 cut(s) 2227
BstYI RGATCY 4 cut(s) 947, 1048, 2033, 3151
BstZI CGGCCG 1 cut(s) 1836
BsuRI GGCC 9 cut(s) 560, 1222, 1482, 1838, 2214, 2252, 2985, 3126, 3491
BtgI CCRYGG 2 cut(s) 3127, 3598
BtsCI GGATG 9 cut(s) 475, 535, 1021, 1792, 1976, 2216, 2398, 2432, 3101
BtsI GCAGTG 4 cut(s) 181, 1638, 3095, 3818
Cac8I GCNNGC 8 cut(s) 315, 361, 2283, 2287, 2488, 2508, 2578, 2847
CaiI CAGNNNCTG 2 cut(s) 418, 632
CciI TCATGA 1 cut(s) 702
CfoI GCGC 1 cut(s) 3116
Cfr9I CCCGGG 1 cut(s) 2634
CseI GACGC 1 cut(s) 3174
Csp6I GTAC 7 cut(s) 514, 543, 1559, 1875, 2141, 3009, 3745
CviQI GTAC 7 cut(s) 514, 543, 1559, 1875, 2141, 3009, 3745
DraI TTTAAA 3 cut(s) 595, 1519, 2919
EaeI YGGCCR 4 cut(s) 1220, 1480, 1836, 3489
EagI CGGCCG 1 cut(s) 1836
Eam1104I CTCTTC 3 cut(s) 56, 1059, 1851
EarI CTCTTC 3 cut(s) 56, 1059, 1851
Ecl136II GAGCTC 1 cut(s) 700
EclXI CGGCCG 1 cut(s) 1836
Eco130I CCWWGG 6 cut(s) 1644, 1980, 2986, 3080, 3127, 3598
Eco24I GRGCYC 1 cut(s) 702
Eco32I GATATC 5 cut(s) 991, 2802, 2883, 3298, 3502
Eco47I GGWCC 9 cut(s) 59, 1241, 1525, 1984, 2690, 2975, 3472, 3644, 3815
Eco52I CGGCCG 1 cut(s) 1836
Eco53kI GAGCTC 1 cut(s) 700
Eco57I CTGAAG 2 cut(s) 281, 2472
Eco88I CYCGRG 3 cut(s) 680, 2634, 2888
EcoICRI GAGCTC 1 cut(s) 700
EcoO109I RGGNCCY 2 cut(s) 1241, 1984
EcoRI GAATTC 1 cut(s) 1419
EcoRII CCWGG 8 cut(s) 91, 631, 640, 1206, 1243, 2570, 2649, 3747
EcoRV GATATC 5 cut(s) 991, 2802, 2883, 3298, 3502
EcoT14I CCWWGG 6 cut(s) 1644, 1980, 2986, 3080, 3127, 3598
EcoT22I ATGCAT 3 cut(s) 854, 2420, 2512
EcoT38I GRGCYC 1 cut(s) 702
ErhI CCWWGG 6 cut(s) 1644, 1980, 2986, 3080, 3127, 3598
FalI AAGNNNNNCTT 2 cut(s) 2797, 2829
FaqI GGGAC 3 cut(s) 1316, 2651, 3617
FbaI TGATCA 1 cut(s) 3363
FokI GGATG 9 cut(s) 482, 542, 1028, 1799, 1963, 2203, 2405, 2419, 3088
FriOI GRGCYC 1 cut(s) 702
FspBI CTAG 6 cut(s) 740, 1134, 1196, 2232, 2595, 3680
FspI TGCGCA 1 cut(s) 3115
GlaI GCGC 1 cut(s) 3115
GsuI CTGGAG 1 cut(s) 2633
HaeIII GGCC 9 cut(s) 560, 1222, 1482, 1838, 2214, 2252, 2985, 3126, 3491
HapII CCGG 2 cut(s) 2165, 2635
HgaI GACGC 1 cut(s) 3174
HhaI GCGC 1 cut(s) 3116
Hin1I GRCGYC 2 cut(s) 5, 111
Hin6I GCGC 1 cut(s) 3114
HinP1I GCGC 1 cut(s) 3114
HincII GTYRAC 3 cut(s) 672, 1003, 1414
HindII GTYRAC 3 cut(s) 672, 1003, 1414
HindIII AAGCTT 4 cut(s) 1102, 2266, 3074, 3867
HpaI GTTAAC 2 cut(s) 672, 1003
HpaII CCGG 2 cut(s) 2165, 2635
HphI GGTGA 9 cut(s) 629, 639, 767, 1347, 1687, 2154, 2955, 3239, 3604
Hpy99I CGWCG 1 cut(s) 10
HpyCH4III ACNGT 7 cut(s) 85, 146, 466, 513, 676, 966, 1330
HpyCH4IV ACGT 4 cut(s) 5, 111, 308, 708
HpySE526I ACGT 4 cut(s) 5, 111, 308, 708
Hsp92I GRCGYC 2 cut(s) 5, 111
HspAI GCGC 1 cut(s) 3114
Ksp22I TGATCA 1 cut(s) 3363
KspAI GTTAAC 2 cut(s) 672, 1003
LguI GCTCTTC 1 cut(s) 56
LmnI GCTCC 6 cut(s) 697, 824, 1297, 1627, 2614, 2765
LweI GCATC 1 cut(s) 1936
MaeI CTAG 6 cut(s) 740, 1134, 1196, 2232, 2595, 3680
MaeII ACGT 4 cut(s) 5, 111, 308, 708
MaeIII GTNAC 8 cut(s) 112, 430, 1057, 1353, 1366, 1693, 2169, 2344
MbiI CCGCTC 1 cut(s) 29
MfeI CAATTG 1 cut(s) 1848
MflI RGATCY 4 cut(s) 947, 1048, 2033, 3151
MhlI GDGCHC 3 cut(s) 319, 702, 1155
MlsI TGGCCA 2 cut(s) 1482, 3491
MluNI TGGCCA 2 cut(s) 1482, 3491
MlyI GAGTC 6 cut(s) 424, 692, 1361, 1816, 2301, 2633
MmeI TCCRAC 7 cut(s) 287, 2020, 2668, 2888, 3529, 3622, 3664
Mox20I TGGCCA 2 cut(s) 1482, 3491
Mph1103I ATGCAT 3 cut(s) 854, 2420, 2512
MroXI GAANNNNTTC 2 cut(s) 1271, 2091
MscI TGGCCA 2 cut(s) 1482, 3491
MslI CAYNNNNRTG 3 cut(s) 707, 1148, 2276
Msp20I TGGCCA 2 cut(s) 1482, 3491
MspA1I CMGCKG 5 cut(s) 46, 1259, 1445, 2849, 3107
MspI CCGG 2 cut(s) 2165, 2635
MunI CAATTG 1 cut(s) 1848
Mva1269I GAATGC 2 cut(s) 896, 1685
MvaI CCWGG 8 cut(s) 93, 633, 642, 1208, 1245, 2572, 2651, 3749
NciI CCSGG 2 cut(s) 2635, 2636
NcoI CCATGG 2 cut(s) 3127, 3598
NlaIV GGNNCC 6 cut(s) 208, 960, 1050, 1527, 1623, 3086
NmeAIII GCCGAG 2 cut(s) 1591, 2315
NmuCI GTSAC 5 cut(s) 112, 430, 1353, 1366, 1693
NsbI TGCGCA 1 cut(s) 3115
NsiI ATGCAT 3 cut(s) 854, 2420, 2512
OliI CACNNNNGTG 1 cut(s) 1148
PaeI GCATGC 3 cut(s) 363, 2289, 2510
PagI TCATGA 1 cut(s) 702
PciI ACATGT 2 cut(s) 1601, 2127
PciSI GCTCTTC 1 cut(s) 56
PctI GAATGC 2 cut(s) 896, 1685
PdmI GAANNNNTTC 2 cut(s) 1271, 2091
PflMI CCANNNNNTGG 1 cut(s) 3426
Ple19I CGATCG 1 cut(s) 3546
PleI GAGTC 6 cut(s) 423, 691, 1360, 1816, 2300, 2633
PpsI GAGTC 6 cut(s) 423, 691, 1360, 1816, 2300, 2633
PpuMI RGGWCCY 2 cut(s) 1241, 1984
PscI ACATGT 2 cut(s) 1601, 2127
PshBI ATTAAT 1 cut(s) 2075
PsiI TTATAA 2 cut(s) 1889, 3179
Psp124BI GAGCTC 1 cut(s) 702
Psp1406I AACGTT 1 cut(s) 308
Psp5II RGGWCCY 2 cut(s) 1241, 1984
Psp6I CCWGG 8 cut(s) 91, 631, 640, 1206, 1243, 2570, 2649, 3747
PspGI CCWGG 8 cut(s) 91, 631, 640, 1206, 1243, 2570, 2649, 3747
PspN4I GGNNCC 6 cut(s) 208, 960, 1050, 1527, 1623, 3086
PspPPI RGGWCCY 2 cut(s) 1241, 1984
PstI CTGCAG 2 cut(s) 1597, 3825
PstNI CAGNNNCTG 2 cut(s) 418, 632
PsuI RGATCY 4 cut(s) 947, 1048, 2033, 3151
PvuI CGATCG 1 cut(s) 3546
PvuII CAGCTG 2 cut(s) 46, 2849
RsaI GTAC 7 cut(s) 515, 544, 1560, 1876, 2142, 3010, 3746
RsaNI GTAC 7 cut(s) 514, 543, 1559, 1875, 2141, 3009, 3745
RseI CAYNNNNRTG 3 cut(s) 707, 1148, 2276
SacI GAGCTC 1 cut(s) 702
SapI GCTCTTC 1 cut(s) 56
SchI GAGTC 6 cut(s) 424, 692, 1361, 1816, 2301, 2633
SduI GDGCHC 3 cut(s) 319, 702, 1155
SfaNI GCATC 1 cut(s) 1936
SfcI CTRYAG 7 cut(s) 1300, 1593, 2725, 3054, 3375, 3522, 3821
SinI GGWCC 9 cut(s) 59, 1241, 1525, 1984, 2690, 2975, 3472, 3644, 3815
SmaI CCCGGG 1 cut(s) 2636
SmiMI CAYNNNNRTG 3 cut(s) 707, 1148, 2276
SmlI CTYRAG 4 cut(s) 364, 1053, 3268, 3706
SmoI CTYRAG 4 cut(s) 364, 1053, 3268, 3706
SphI GCATGC 3 cut(s) 363, 2289, 2510
SsiI CCGC 7 cut(s) 27, 1259, 1445, 1878, 2258, 3105, 3515
SspI AATATT 1 cut(s) 1381
SspMI CTAG 6 cut(s) 740, 1134, 1196, 2232, 2595, 3680
SstI GAGCTC 1 cut(s) 702
StyI CCWWGG 6 cut(s) 1644, 1980, 2986, 3080, 3127, 3598
TaaI ACNGT 7 cut(s) 85, 146, 466, 513, 676, 966, 1330
TaiI ACGT 4 cut(s) 8, 114, 311, 711
TaqI TCGA 4 cut(s) 477, 2780, 3542, 3558
TatI WGTACW 3 cut(s) 513, 1558, 3008
TauI GCSGC 1 cut(s) 29
TseFI GTSAC 5 cut(s) 112, 430, 1353, 1366, 1693
Tsp45I GTSAC 5 cut(s) 112, 430, 1353, 1366, 1693
TspGWI ACGGA 1 cut(s) 1431
TspMI CCCGGG 1 cut(s) 2634
Van91I CCANNNNNTGG 1 cut(s) 3426
VpaK11BI GGWCC 9 cut(s) 59, 1241, 1525, 1984, 2690, 2975, 3472, 3644, 3815
VspI ATTAAT 1 cut(s) 2075
XbaI TCTAGA 1 cut(s) 1133
XcmI CCANNNNNNNNNTGG 2 cut(s) 1230, 2853
XmaI CCCGGG 1 cut(s) 2634
XmnI GAANNNNTTC 2 cut(s) 1271, 2091
XspI CTAG 6 cut(s) 740, 1134, 1196, 2232, 2595, 3680
ZraI GACGTC 2 cut(s) 6, 112
Zsp2I ATGCAT 3 cut(s) 854, 2420, 2512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.