RchiOBHm_Chr2g0117421

Cell division control protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002408
Physical Location & Seq
Reverse (-)
29621569 .. 29622240
672 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 264 bp
ATGAGGATAGTGAAGGAGGCATTGCACTTGTCTACGGTTCCCTCTAGTGTTGCGTGCCGCGACGTGGAGCAGAAGGTTCTGGAGTTCTGCAAGTCATACATAGAGCAAGAGAAGGCTCATGGATACAGTTTTGGATTAGGTAGAAACTCATTTCTTTTAGTAATGGTTAAAGTAGTTTTTGGTTTTTTGTTGCTGGTGGGAATAGCTTTTAGTGTTGCTGAGAGTAGTTTTGTTGCTGGTGACAGTAACTTTTATTTTTTATGA

Protein Analysis

87

Amino Acids

9.67

Weight (kDa)

6.71

Isoelectric Point (pI)

33.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 32
AccII CGCG 1 cut(s) 60
AciI CCGC 1 cut(s) 58
AfiI CCNNNNNNNGG 1 cut(s) 64
AjiI CACGTC 1 cut(s) 64
AluBI AGCT 1 cut(s) 206
AluI AGCT 1 cut(s) 206
AsuHPI GGTGA 1 cut(s) 251
BciVI GTATCC 1 cut(s) 116
BfaI CTAG 1 cut(s) 45
BfuI GTATCC 1 cut(s) 116
BisI GCNGC 1 cut(s) 58
BlsI GCNGC 1 cut(s) 59
BmgBI CACGTC 1 cut(s) 64
BmiI GGNNCC 1 cut(s) 39
BpmI CTGGAG 1 cut(s) 101
Bsc4I CCNNNNNNNGG 1 cut(s) 64
Bse3DI GCAATG 1 cut(s) 20
BseLI CCNNNNNNNGG 1 cut(s) 64
BseMI GCAATG 1 cut(s) 20
BseMII CTCAG 1 cut(s) 210
Bsh1236I CGCG 1 cut(s) 60
BslI CCNNNNNNNGG 1 cut(s) 64
BspACI CCGC 1 cut(s) 58
BspCNI CTCAG 1 cut(s) 211
BspFNI CGCG 1 cut(s) 60
BspLI GGNNCC 1 cut(s) 39
BsrDI GCAATG 1 cut(s) 20
Bst4CI ACNGT 3 cut(s) 37, 128, 245
BstC8I GCNNGC 1 cut(s) 55
BstDEI CTNAG 1 cut(s) 219
BstFNI CGCG 1 cut(s) 60
BstUI CGCG 1 cut(s) 60
BsuI GTATCC 1 cut(s) 116
BtrI CACGTC 1 cut(s) 64
Cac8I GCNNGC 1 cut(s) 55
CviAII CATG 1 cut(s) 119
CviJI RGCY 2 cut(s) 116, 206
CviKI_1 RGCY 2 cut(s) 116, 206
DdeI CTNAG 1 cut(s) 219
FaeI CATG 1 cut(s) 122
FaiI YATR 4 cut(s) 97, 101, 120, 262
FatI CATG 1 cut(s) 118
FblI GTMKAC 1 cut(s) 32
Fnu4HI GCNGC 1 cut(s) 58
Fsp4HI GCNGC 1 cut(s) 58
FspBI CTAG 1 cut(s) 45
GluI GCNGC 1 cut(s) 58
GsuI CTGGAG 1 cut(s) 101
Hin1II CATG 1 cut(s) 122
HphI GGTGA 1 cut(s) 251
Hpy166II GTNNAC 1 cut(s) 33
Hpy188III TCNNGA 1 cut(s) 80
Hpy8I GTNNAC 1 cut(s) 33
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 3 cut(s) 7, 67, 106
HpyCH4III ACNGT 3 cut(s) 37, 128, 245
HpyCH4IV ACGT 1 cut(s) 63
HpyCH4V TGCA 2 cut(s) 25, 90
HpyF3I CTNAG 1 cut(s) 219
HpySE526I ACGT 1 cut(s) 63
Hsp92II CATG 1 cut(s) 122
LmnI GCTCC 1 cut(s) 67
LpnPI CCDG 3 cut(s) 65, 179, 222
MaeI CTAG 1 cut(s) 45
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 2 cut(s) 239, 245
MnlI CCTC 2 cut(s) 10, 52
MseI TTAA 1 cut(s) 168
MvnI CGCG 1 cut(s) 60
NlaIII CATG 1 cut(s) 122
NlaIV GGNNCC 1 cut(s) 39
NmuCI GTSAC 1 cut(s) 239
PkrI GCNGC 1 cut(s) 59
PspN4I GGNNCC 1 cut(s) 39
SaqAI TTAA 1 cut(s) 168
SatI GCNGC 1 cut(s) 58
SetI ASST 4 cut(s) 66, 78, 142, 208
SsiI CCGC 1 cut(s) 58
SspMI CTAG 1 cut(s) 45
TaaI ACNGT 3 cut(s) 37, 128, 245
TaiI ACGT 1 cut(s) 66
TauI GCSGC 1 cut(s) 60
Tru1I TTAA 1 cut(s) 168
Tru9I TTAA 1 cut(s) 168
TseFI GTSAC 1 cut(s) 239
Tsp45I GTSAC 1 cut(s) 239
XmiI GTMKAC 1 cut(s) 32
XspI CTAG 1 cut(s) 45
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.