Single-stranded DNA-binding protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G11060 |
| fragaria_vesca | FvH4_4g00740 FvH4_6g07030 FvH4_6g07030 |
| malus_domestica | MD04G1196700.v1.1 MD12G1209600.v1.1 |
| prunus_persica | Prupe.6G317000_v2.0.a1 Prupe.6G317000_v2.0.a1 Prupe.6G317000_v2.0.a1 Prupe.6G317000_v2.0.a1 |
| pyrus_communis | pycom12g19690 |
| rosa_chinensis | RchiOBHm_Chr1g0345881 RchiOBHm_Chr2g0130211 RchiOBHm_Chr3g0456561 RchiOBHm_Chr3g0481651 RchiOBHm_Chr4g0404121 RchiOBHm_Chr4g0439671 RchiOBHm_Chr6g0253121 |
| rosa_laevigata | RLG00000000940 RLG00000007307 RLG00000025293 |
| rosa_multiflora | Rmu_sc0002607.1_g000003 Rmu_sc0017908.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00133280 Rroxscaffold_4G00309030 Rroxscaffold_4G00314410 Rroxscaffold_5G00340470 Rroxscaffold_5G00380600 Rroxscaffold_6G00422620 |
| rosa_rugosa | Rorug03G0013900 Rorug03G0013900 |
| rosa_samantha | Rh1CG068600 Rh3AG074700 Rh3BG076400 Rh3DG078200 Rh5AG110200 Rh5DG213600 Rh7DG365300 |
| rosa_wichuraiana | Rw3G006390 Rw3G008940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 112 |
| AclWI | GGATC | 2 cut(s) | 110, 123 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AcuI | CTGAAG | 2 cut(s) | 72, 219 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 112, 125 |
| AgsI | TTSAA | 1 cut(s) | 85 |
| AluBI | AGCT | 2 cut(s) | 178, 286 |
| AluI | AGCT | 2 cut(s) | 178, 286 |
| Alw21I | GWGCWC | 1 cut(s) | 150 |
| Alw26I | GTCTC | 1 cut(s) | 13 |
| Alw44I | GTGCAC | 1 cut(s) | 146 |
| AlwI | GGATC | 2 cut(s) | 110, 123 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 228 |
| ApaLI | GTGCAC | 1 cut(s) | 146 |
| ApeKI | GCWGC | 2 cut(s) | 157, 175 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| BaeGI | GKGCMC | 1 cut(s) | 150 |
| BamHI | GGATCC | 1 cut(s) | 115 |
| Bbv12I | GWGCWC | 1 cut(s) | 150 |
| BbvI | GCAGC | 2 cut(s) | 169, 187 |
| BcoDI | GTCTC | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 179 |
| BisI | GCNGC | 2 cut(s) | 158, 176 |
| BlsI | GCNGC | 2 cut(s) | 159, 177 |
| BmiI | GGNNCC | 1 cut(s) | 117 |
| BsaJI | CCNNGG | 1 cut(s) | 106 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 112, 125 |
| BseDI | CCNNGG | 1 cut(s) | 106 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 112, 125 |
| BseSI | GKGCMC | 1 cut(s) | 150 |
| BseXI | GCAGC | 2 cut(s) | 169, 187 |
| BsiHKAI | GWGCWC | 1 cut(s) | 150 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 112, 125 |
| BsmAI | GTCTC | 1 cut(s) | 13 |
| BsmBI | CGTCTC | 1 cut(s) | 13 |
| Bsp1286I | GDGCHC | 1 cut(s) | 150 |
| Bsp143I | GATC | 2 cut(s) | 115, 166 |
| BspLI | GGNNCC | 1 cut(s) | 117 |
| BspPI | GGATC | 2 cut(s) | 110, 123 |
| BssECI | CCNNGG | 1 cut(s) | 106 |
| BssMI | GATC | 2 cut(s) | 115, 166 |
| BssT1I | CCWWGG | 1 cut(s) | 106 |
| Bst4CI | ACNGT | 1 cut(s) | 20 |
| BstC8I | GCNNGC | 1 cut(s) | 102 |
| BstKTI | GATC | 2 cut(s) | 118, 169 |
| BstMAI | GTCTC | 1 cut(s) | 13 |
| BstMBI | GATC | 2 cut(s) | 115, 166 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 154 |
| BstSLI | GKGCMC | 1 cut(s) | 150 |
| BstV1I | GCAGC | 2 cut(s) | 169, 187 |
| BstX2I | RGATCY | 1 cut(s) | 115 |
| BstYI | RGATCY | 1 cut(s) | 115 |
| BtsIMutI | CAGTG | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 1 cut(s) | 102 |
| CaiI | CAGNNNCTG | 1 cut(s) | 228 |
| CseI | GACGC | 1 cut(s) | 41 |
| CviJI | RGCY | 5 cut(s) | 104, 160, 178, 225, 286 |
| CviKI_1 | RGCY | 5 cut(s) | 104, 160, 178, 225, 286 |
| DpnI | GATC | 2 cut(s) | 117, 168 |
| DpnII | GATC | 2 cut(s) | 115, 166 |
| Eco130I | CCWWGG | 1 cut(s) | 106 |
| Eco57I | CTGAAG | 2 cut(s) | 72, 219 |
| EcoT14I | CCWWGG | 1 cut(s) | 106 |
| ErhI | CCWWGG | 1 cut(s) | 106 |
| Esp3I | CGTCTC | 1 cut(s) | 13 |
| FaiI | YATR | 6 cut(s) | 98, 209, 213, 248, 255, 263 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 228, 260 |
| Fnu4HI | GCNGC | 2 cut(s) | 158, 176 |
| Fsp4HI | GCNGC | 2 cut(s) | 158, 176 |
| FspBI | CTAG | 1 cut(s) | 179 |
| GluI | GCNGC | 2 cut(s) | 158, 176 |
| HgaI | GACGC | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 1 cut(s) | 148 |
| Hpy188I | TCNGA | 1 cut(s) | 199 |
| Hpy188III | TCNNGA | 1 cut(s) | 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 148 |
| HpyCH4III | ACNGT | 1 cut(s) | 20 |
| HpyCH4V | TGCA | 3 cut(s) | 100, 148, 265 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 154 |
| Kzo9I | GATC | 2 cut(s) | 115, 166 |
| LpnPI | CCDG | 3 cut(s) | 177, 235, 256 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 187 |
| MaeI | CTAG | 1 cut(s) | 179 |
| MaeIII | GTNAC | 1 cut(s) | 20 |
| MalI | GATC | 2 cut(s) | 117, 168 |
| MboI | GATC | 2 cut(s) | 115, 166 |
| MboII | GAAGA | 3 cut(s) | 65, 68, 212 |
| MflI | RGATCY | 1 cut(s) | 115 |
| MhlI | GDGCHC | 1 cut(s) | 150 |
| MluCI | AATT | 2 cut(s) | 42, 67 |
| MnlI | CCTC | 2 cut(s) | 117, 236 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 154 |
| NdeII | GATC | 2 cut(s) | 115, 166 |
| NlaIV | GGNNCC | 1 cut(s) | 117 |
| NmuCI | GTSAC | 1 cut(s) | 20 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 112 |
| PkrI | GCNGC | 2 cut(s) | 159, 177 |
| PspN4I | GGNNCC | 1 cut(s) | 117 |
| PstNI | CAGNNNCTG | 1 cut(s) | 228 |
| PsuI | RGATCY | 1 cut(s) | 115 |
| SatI | GCNGC | 2 cut(s) | 158, 176 |
| Sau3AI | GATC | 2 cut(s) | 115, 166 |
| SduI | GDGCHC | 1 cut(s) | 150 |
| SetI | ASST | 3 cut(s) | 112, 180, 288 |
| Sse9I | AATT | 2 cut(s) | 42, 67 |
| SspMI | CTAG | 1 cut(s) | 179 |
| StyI | CCWWGG | 1 cut(s) | 106 |
| TaaI | ACNGT | 1 cut(s) | 20 |
| TasI | AATT | 2 cut(s) | 42, 67 |
| TscAI | CASTG | 1 cut(s) | 25 |
| TseFI | GTSAC | 1 cut(s) | 20 |
| TseI | GCWGC | 2 cut(s) | 157, 175 |
| Tsp45I | GTSAC | 1 cut(s) | 20 |
| TspDTI | ATGAA | 1 cut(s) | 263 |
| TspRI | CASTG | 1 cut(s) | 25 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 112 |
| VneI | GTGCAC | 1 cut(s) | 146 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XspI | CTAG | 1 cut(s) | 179 |