Protein ABCI12, chloroplastic-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21580 |
| fragaria_vesca | FvH4_4g14170 FvH4_4g14170 FvH4_4g14170 FvH4_4g14170 |
| malus_domestica | MD13G1180000.v1.1 |
| prunus_persica | Prupe.1G148500_v2.0.a1 |
| pyrus_communis | pycom13g15550 |
| rosa_chinensis | RchiOBHm_Chr1g0356001 RchiOBHm_Chr2g0086241 RchiOBHm_Chr4g0419051 RchiOBHm_Chr5g0045591 RchiOBHm_Chr5g0064291 |
| rosa_laevigata | RLG00000007829 RLG00000023906 |
| rosa_multiflora | Rmu_sc0000048.1_g000009 Rmu_sc0000831.1_g000030 Rmu_sc0000913.1_g000005 Rmu_sc0015926.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00362110 Rroxscaffold_7G00165560 |
| rosa_rugosa | Rorug04G0095000 Rorug04G0156700 Rorug04G0156800 Rorug04G0156900 |
| rosa_samantha | Rh1DG103700 Rh2CG432800 Rh2CG585000 Rh4AG218300 Rh4BG219800 Rh4CG230200 Rh4DG216800 Rh5BG312800 Rh5DG323400 Rh7BG246100 Rh7CG235700 Rh7CG310900 |
| rosa_wichuraiana | Rw4G018660 Rw5G019640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 647 |
| Acc36I | ACCTGC | 1 cut(s) | 49 |
| AciI | CCGC | 1 cut(s) | 478 |
| AclWI | GGATC | 1 cut(s) | 186 |
| AcoI | YGGCCR | 1 cut(s) | 135 |
| AcuI | CTGAAG | 3 cut(s) | 477, 543, 606 |
| AfaI | GTAC | 1 cut(s) | 626 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 480 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 262, 294 |
| AluBI | AGCT | 2 cut(s) | 346, 395 |
| AluI | AGCT | 2 cut(s) | 346, 395 |
| Alw26I | GTCTC | 1 cut(s) | 157 |
| AlwI | GGATC | 1 cut(s) | 186 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 521 |
| AoxI | GGCC | 1 cut(s) | 135 |
| ApeKI | GCWGC | 1 cut(s) | 395 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 528 |
| AspLEI | GCGC | 1 cut(s) | 248 |
| AspS9I | GGNCC | 1 cut(s) | 350 |
| AvaII | GGWCC | 1 cut(s) | 350 |
| BalI | TGGCCA | 1 cut(s) | 137 |
| BbvI | GCAGC | 1 cut(s) | 382 |
| BccI | CCATC | 2 cut(s) | 169, 236 |
| BcoDI | GTCTC | 1 cut(s) | 157 |
| BfaI | CTAG | 3 cut(s) | 77, 227, 347 |
| BfmI | CTRYAG | 1 cut(s) | 381 |
| BfuAI | ACCTGC | 1 cut(s) | 49 |
| BisI | GCNGC | 1 cut(s) | 396 |
| BlsI | GCNGC | 1 cut(s) | 397 |
| Bme18I | GGWCC | 1 cut(s) | 350 |
| BmgT120I | GGNCC | 1 cut(s) | 350 |
| BmsI | GCATC | 1 cut(s) | 320 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 259, 291 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 262, 292, 501, 531 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 480 |
| Bse1I | ACTGG | 1 cut(s) | 515 |
| BseGI | GGATG | 1 cut(s) | 180 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 480 |
| BseNI | ACTGG | 1 cut(s) | 515 |
| BseRI | GAGGAG | 2 cut(s) | 264, 267 |
| BseXI | GCAGC | 1 cut(s) | 382 |
| BseYI | CCCAGC | 1 cut(s) | 232 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 480 |
| BsmAI | GTCTC | 1 cut(s) | 157 |
| BsnI | GGCC | 1 cut(s) | 137 |
| Bsp143I | GATC | 1 cut(s) | 178 |
| BspACI | CCGC | 1 cut(s) | 478 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BspMI | ACCTGC | 1 cut(s) | 49 |
| BspPI | GGATC | 1 cut(s) | 186 |
| BsrI | ACTGG | 1 cut(s) | 515 |
| BssMI | GATC | 1 cut(s) | 178 |
| Bst4CI | ACNGT | 2 cut(s) | 360, 415 |
| Bst6I | CTCTTC | 1 cut(s) | 184 |
| BstC8I | GCNNGC | 3 cut(s) | 322, 388, 430 |
| BstF5I | GGATG | 1 cut(s) | 180 |
| BstHHI | GCGC | 1 cut(s) | 248 |
| BstKTI | GATC | 1 cut(s) | 181 |
| BstMAI | GTCTC | 1 cut(s) | 157 |
| BstMBI | GATC | 1 cut(s) | 178 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 64, 317, 392 |
| BstNSI | RCATGY | 1 cut(s) | 170 |
| BstSFI | CTRYAG | 1 cut(s) | 381 |
| BstV1I | GCAGC | 1 cut(s) | 382 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| BtsCI | GGATG | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 2 cut(s) | 522, 582 |
| BveI | ACCTGC | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 3 cut(s) | 322, 388, 430 |
| CaiI | CAGNNNCTG | 1 cut(s) | 521 |
| CfoI | GCGC | 1 cut(s) | 248 |
| Cfr13I | GGNCC | 1 cut(s) | 350 |
| Csp6I | GTAC | 1 cut(s) | 625 |
| CviAII | CATG | 2 cut(s) | 167, 541 |
| CviQI | GTAC | 1 cut(s) | 625 |
| DpnI | GATC | 1 cut(s) | 180 |
| DpnII | GATC | 1 cut(s) | 178 |
| EaeI | YGGCCR | 1 cut(s) | 135 |
| Eam1104I | CTCTTC | 1 cut(s) | 184 |
| EarI | CTCTTC | 1 cut(s) | 184 |
| Eco47I | GGWCC | 1 cut(s) | 350 |
| Eco57I | CTGAAG | 3 cut(s) | 477, 543, 606 |
| FaeI | CATG | 2 cut(s) | 170, 544 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 181, 213, 516, 548 |
| FatI | CATG | 2 cut(s) | 166, 540 |
| Fnu4HI | GCNGC | 1 cut(s) | 396 |
| FokI | GGATG | 1 cut(s) | 187 |
| Fsp4HI | GCNGC | 1 cut(s) | 396 |
| FspBI | CTAG | 3 cut(s) | 77, 227, 347 |
| GlaI | GCGC | 1 cut(s) | 247 |
| GluI | GCNGC | 1 cut(s) | 396 |
| GsaI | CCCAGC | 1 cut(s) | 236 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| HhaI | GCGC | 1 cut(s) | 248 |
| Hin1II | CATG | 2 cut(s) | 170, 544 |
| Hin6I | GCGC | 1 cut(s) | 246 |
| HinP1I | GCGC | 1 cut(s) | 246 |
| HinfI | GANTC | 1 cut(s) | 22 |
| Hpy166II | GTNNAC | 2 cut(s) | 130, 363 |
| Hpy188III | TCNNGA | 1 cut(s) | 207 |
| Hpy8I | GTNNAC | 2 cut(s) | 130, 363 |
| HpyAV | CCTTC | 1 cut(s) | 364 |
| HpyCH4III | ACNGT | 2 cut(s) | 360, 415 |
| HpyCH4V | TGCA | 5 cut(s) | 58, 284, 311, 467, 636 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 64, 317, 392 |
| Hsp92II | CATG | 2 cut(s) | 170, 544 |
| HspAI | GCGC | 1 cut(s) | 246 |
| Kzo9I | GATC | 1 cut(s) | 178 |
| LmnI | GCTCC | 1 cut(s) | 495 |
| Lsp1109I | GCAGC | 1 cut(s) | 382 |
| LweI | GCATC | 1 cut(s) | 320 |
| MaeI | CTAG | 3 cut(s) | 77, 227, 347 |
| MaeIII | GTNAC | 2 cut(s) | 84, 96 |
| MalI | GATC | 1 cut(s) | 180 |
| MboI | GATC | 1 cut(s) | 178 |
| MboII | GAAGA | 3 cut(s) | 201, 296, 470 |
| MfeI | CAATTG | 1 cut(s) | 182 |
| MlsI | TGGCCA | 1 cut(s) | 137 |
| MluCI | AATT | 6 cut(s) | 45, 182, 201, 336, 615, 651 |
| MluNI | TGGCCA | 1 cut(s) | 137 |
| MnlI | CCTC | 4 cut(s) | 87, 285, 288, 546 |
| Mox20I | TGGCCA | 1 cut(s) | 137 |
| MroXI | GAANNNNTTC | 1 cut(s) | 528 |
| MscI | TGGCCA | 1 cut(s) | 137 |
| MseI | TTAA | 4 cut(s) | 200, 335, 342, 404 |
| Msp20I | TGGCCA | 1 cut(s) | 137 |
| MspA1I | CMGCKG | 1 cut(s) | 395 |
| MunI | CAATTG | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 64, 317, 392 |
| NdeII | GATC | 1 cut(s) | 178 |
| NlaIII | CATG | 2 cut(s) | 170, 544 |
| NmeAIII | GCCGAG | 1 cut(s) | 186 |
| NmuCI | GTSAC | 1 cut(s) | 96 |
| NspI | RCATGY | 1 cut(s) | 170 |
| PdmI | GAANNNNTTC | 1 cut(s) | 528 |
| PfeI | GAWTC | 1 cut(s) | 22 |
| PkrI | GCNGC | 1 cut(s) | 397 |
| PsiI | TTATAA | 1 cut(s) | 647 |
| PspFI | CCCAGC | 1 cut(s) | 232 |
| PspPI | GGNCC | 1 cut(s) | 350 |
| PstNI | CAGNNNCTG | 1 cut(s) | 521 |
| PvuII | CAGCTG | 1 cut(s) | 395 |
| RsaI | GTAC | 1 cut(s) | 626 |
| RsaNI | GTAC | 1 cut(s) | 625 |
| SaqAI | TTAA | 4 cut(s) | 200, 335, 342, 404 |
| SatI | GCNGC | 1 cut(s) | 396 |
| Sau3AI | GATC | 1 cut(s) | 178 |
| Sau96I | GGNCC | 1 cut(s) | 350 |
| SetI | ASST | 6 cut(s) | 63, 98, 348, 397, 410, 557 |
| SfaNI | GCATC | 1 cut(s) | 320 |
| SfcI | CTRYAG | 1 cut(s) | 381 |
| SinI | GGWCC | 1 cut(s) | 350 |
| Sse9I | AATT | 6 cut(s) | 45, 182, 201, 336, 615, 651 |
| SsiI | CCGC | 1 cut(s) | 478 |
| SspMI | CTAG | 3 cut(s) | 77, 227, 347 |
| TaaI | ACNGT | 2 cut(s) | 360, 415 |
| TasI | AATT | 6 cut(s) | 45, 182, 201, 336, 615, 651 |
| TfiI | GAWTC | 1 cut(s) | 22 |
| Tru1I | TTAA | 4 cut(s) | 200, 335, 342, 404 |
| Tru9I | TTAA | 4 cut(s) | 200, 335, 342, 404 |
| TscAI | CASTG | 2 cut(s) | 522, 589 |
| TseFI | GTSAC | 1 cut(s) | 96 |
| TseI | GCWGC | 1 cut(s) | 395 |
| Tsp45I | GTSAC | 1 cut(s) | 96 |
| TspDTI | ATGAA | 2 cut(s) | 208, 547 |
| TspRI | CASTG | 2 cut(s) | 522, 589 |
| VpaK11BI | GGWCC | 1 cut(s) | 350 |
| XceI | RCATGY | 1 cut(s) | 170 |
| XmnI | GAANNNNTTC | 1 cut(s) | 528 |
| XspI | CTAG | 3 cut(s) | 77, 227, 347 |