RchiOBHm_Chr5g0069521

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
75356507 .. 75358745
2239 bp
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UTR
Exon/CDS
Intron
PRQ34491

Sequence Viewer

Length: 189 bp
ATGCAGCTAGGTTGCCAAATGTTCCTTGTATTTGTTATTGATGCTTCTGTATTTATTGAAGAAGCAAAATTGTGGTTGATATACTCAGCTAAGGCCATGGCTGGTGATACTGTTGTAAGGTCATTGCTAGAAAAGATGGCTGAATGTGCTAGCAATGCGTACCTGGGTATATTAGTGAGTATGATTTGA

Protein Analysis

62

Amino Acids

6.83

Weight (kDa)

4.66

Isoelectric Point (pI)

46.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 161
AgsI TTSAA 1 cut(s) 59
AjnI CCWGG 1 cut(s) 162
AluBI AGCT 2 cut(s) 7, 89
AluI AGCT 2 cut(s) 7, 89
AoxI GGCC 1 cut(s) 93
ApeKI GCWGC 1 cut(s) 4
AsuHPI GGTGA 1 cut(s) 116
AsuNHI GCTAGC 1 cut(s) 149
BaeI ACNNNNGTAYC 2 cut(s) 99, 132
BbvI GCAGC 1 cut(s) 16
BccI CCATC 1 cut(s) 130
BciT130I CCWGG 1 cut(s) 164
BfaI CTAG 3 cut(s) 8, 128, 150
BisI GCNGC 1 cut(s) 5
BlsI GCNGC 1 cut(s) 6
Bme1390I CCNGG 1 cut(s) 164
BmrFI CCNGG 1 cut(s) 164
BmsI GCATC 1 cut(s) 31
BmtI GCTAGC 1 cut(s) 153
Bpu10I CCTNAGC 1 cut(s) 90
BsaJI CCNNGG 2 cut(s) 96, 163
Bse3DI GCAATG 2 cut(s) 122, 160
BseBI CCWGG 1 cut(s) 164
BseDI CCNNGG 2 cut(s) 96, 163
BseMI GCAATG 2 cut(s) 122, 160
BseMII CTCAG 1 cut(s) 99
BseXI GCAGC 1 cut(s) 16
BshFI GGCC 1 cut(s) 95
BsnI GGCC 1 cut(s) 95
Bsp19I CCATGG 1 cut(s) 96
BspANI GGCC 1 cut(s) 95
BspCNI CTCAG 1 cut(s) 98
BspOI GCTAGC 1 cut(s) 153
BsrDI GCAATG 2 cut(s) 122, 160
BssECI CCNNGG 2 cut(s) 96, 163
BssT1I CCWWGG 1 cut(s) 96
Bst2UI CCWGG 1 cut(s) 164
Bst4CI ACNGT 1 cut(s) 112
BstC8I GCNNGC 1 cut(s) 151
BstDEI CTNAG 2 cut(s) 85, 90
BstDSI CCRYGG 1 cut(s) 96
BstMWI GCNNNNNNNGC 2 cut(s) 146, 155
BstNI CCWGG 1 cut(s) 164
BstSCI CCNGG 1 cut(s) 162
BstV1I GCAGC 1 cut(s) 16
BsuRI GGCC 1 cut(s) 95
BtgI CCRYGG 1 cut(s) 96
Cac8I GCNNGC 1 cut(s) 151
Csp6I GTAC 1 cut(s) 160
CviAII CATG 1 cut(s) 97
CviJI RGCY 5 cut(s) 7, 89, 95, 101, 140
CviKI_1 RGCY 5 cut(s) 7, 89, 95, 101, 140
CviQI GTAC 1 cut(s) 160
DdeI CTNAG 2 cut(s) 85, 90
Eco130I CCWWGG 1 cut(s) 96
EcoRII CCWGG 1 cut(s) 162
EcoT14I CCWWGG 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 96
FaeI CATG 1 cut(s) 100
FaiI YATR 4 cut(s) 82, 98, 170, 182
FatI CATG 1 cut(s) 96
Fnu4HI GCNGC 1 cut(s) 5
Fsp4HI GCNGC 1 cut(s) 5
FspBI CTAG 3 cut(s) 8, 128, 150
GluI GCNGC 1 cut(s) 5
HaeIII GGCC 1 cut(s) 95
Hin1II CATG 1 cut(s) 100
HphI GGTGA 1 cut(s) 116
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 155
HpyF3I CTNAG 2 cut(s) 85, 90
Hsp92II CATG 1 cut(s) 100
LpnPI CCDG 3 cut(s) 87, 149, 176
Lsp1109I GCAGC 1 cut(s) 16
LweI GCATC 1 cut(s) 31
MaeI CTAG 3 cut(s) 8, 128, 150
MboII GAAGA 1 cut(s) 71
MluCI AATT 1 cut(s) 68
MspR9I CCNGG 1 cut(s) 164
MvaI CCWGG 1 cut(s) 164
MwoI GCNNNNNNNGC 2 cut(s) 146, 155
NcoI CCATGG 1 cut(s) 96
NheI GCTAGC 1 cut(s) 149
NlaIII CATG 1 cut(s) 100
PkrI GCNGC 1 cut(s) 6
Psp6I CCWGG 1 cut(s) 162
PspGI CCWGG 1 cut(s) 162
RsaI GTAC 1 cut(s) 161
RsaNI GTAC 1 cut(s) 160
SatI GCNGC 1 cut(s) 5
ScrFI CCNGG 1 cut(s) 164
SetI ASST 5 cut(s) 9, 13, 91, 122, 165
SfaNI GCATC 1 cut(s) 31
SgeI CNNG 8 cut(s) 20, 38, 109, 114, 140, 162, 175, 176
Sse9I AATT 1 cut(s) 68
SspMI CTAG 3 cut(s) 8, 128, 150
StyD4I CCNGG 1 cut(s) 162
StyI CCWWGG 1 cut(s) 96
TaaI ACNGT 1 cut(s) 112
TasI AATT 1 cut(s) 68
TseI GCWGC 1 cut(s) 4
XspI CTAG 3 cut(s) 8, 128, 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.