The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21720 AT1G77440 AT1G77440 |
| fragaria_vesca | FvH4_2g27460 |
| malus_domestica | MD00G1028400.v1.1 MD15G1344700.v1.1 |
| prunus_persica | Prupe.1G492900_v2.0.a1 |
| pyrus_communis | pycom08g13680 pycom15g30930 |
| rosa_chinensis | RchiOBHm_Chr2g0103031 RchiOBHm_Chr2g0140351 RchiOBHm_Chr4g0425031 RchiOBHm_Chr5g0069521 RchiOBHm_Chr6g0296301 |
| rosa_laevigata | RLG00000003407 RLG00000011708 RLG00000019374 |
| rosa_multiflora | Rmu_co8088830.1_g000001 Rmu_sc0000388.1_g000016 Rmu_sc0004708.1_g000006 Rmu_sc0022551.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00139980 Rroxscaffold_7G00171650 Rroxscaffold_7G00178420 |
| rosa_rugosa | Rorug02G0111500 Rorug04G0057000 Rorug05G0263600 Rorug06G0260800 |
| rosa_samantha | Rh1BG051400 Rh2CG166500 Rh6BG194900 Rh6BG380500 Rh6DG172500 Rh7DG016200 |
| rosa_wichuraiana | Rw2G012490 Rw4G002730 Rw6G032480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 25 |
| AcsI | RAATTY | 1 cut(s) | 66 |
| AcuI | CTGAAG | 1 cut(s) | 168 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 104 |
| AgsI | TTSAA | 1 cut(s) | 38 |
| AluBI | AGCT | 1 cut(s) | 46 |
| AluI | AGCT | 1 cut(s) | 46 |
| ApoI | RAATTY | 1 cut(s) | 66 |
| AspLEI | GCGC | 1 cut(s) | 26 |
| AspS9I | GGNCC | 1 cut(s) | 107 |
| AsuNHI | GCTAGC | 1 cut(s) | 46 |
| AvaII | GGWCC | 1 cut(s) | 107 |
| BanII | GRGCYC | 2 cut(s) | 99, 141 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BfaI | CTAG | 2 cut(s) | 47, 59 |
| Bme18I | GGWCC | 1 cut(s) | 107 |
| BmgT120I | GGNCC | 1 cut(s) | 107 |
| BmsI | GCATC | 1 cut(s) | 185 |
| BmtI | GCTAGC | 1 cut(s) | 50 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 104 |
| Bse3DI | GCAATG | 1 cut(s) | 152 |
| BseGI | GGATG | 1 cut(s) | 200 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 104 |
| BseMI | GCAATG | 1 cut(s) | 152 |
| BseMII | CTCAG | 1 cut(s) | 173 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 104 |
| Bsp1286I | GDGCHC | 2 cut(s) | 99, 141 |
| Bsp143I | GATC | 2 cut(s) | 3, 169 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BspOI | GCTAGC | 1 cut(s) | 50 |
| BsrDI | GCAATG | 1 cut(s) | 152 |
| BssMI | GATC | 2 cut(s) | 3, 169 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 21 |
| BstC8I | GCNNGC | 2 cut(s) | 48, 82 |
| BstDEI | CTNAG | 1 cut(s) | 182 |
| BstF5I | GGATG | 1 cut(s) | 200 |
| BstHHI | GCGC | 1 cut(s) | 26 |
| BstKTI | GATC | 2 cut(s) | 6, 172 |
| BstMBI | GATC | 2 cut(s) | 3, 169 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 21 |
| BtsCI | GGATG | 1 cut(s) | 200 |
| Cac8I | GCNNGC | 2 cut(s) | 48, 82 |
| CfoI | GCGC | 1 cut(s) | 26 |
| Cfr13I | GGNCC | 1 cut(s) | 107 |
| CviAII | CATG | 2 cut(s) | 21, 74 |
| CviJI | RGCY | 4 cut(s) | 46, 84, 97, 139 |
| CviKI_1 | RGCY | 4 cut(s) | 46, 84, 97, 139 |
| DdeI | CTNAG | 1 cut(s) | 182 |
| DpnI | GATC | 2 cut(s) | 5, 171 |
| DpnII | GATC | 2 cut(s) | 3, 169 |
| Eco24I | GRGCYC | 2 cut(s) | 99, 141 |
| Eco47I | GGWCC | 1 cut(s) | 107 |
| Eco57I | CTGAAG | 1 cut(s) | 168 |
| EcoT38I | GRGCYC | 2 cut(s) | 99, 141 |
| FaeI | CATG | 2 cut(s) | 24, 77 |
| FaiI | YATR | 7 cut(s) | 22, 31, 75, 105, 116, 143, 207 |
| FatI | CATG | 2 cut(s) | 20, 73 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| FokI | GGATG | 1 cut(s) | 207 |
| FriOI | GRGCYC | 2 cut(s) | 99, 141 |
| FspAI | RTGCGCAY | 1 cut(s) | 25 |
| FspBI | CTAG | 2 cut(s) | 47, 59 |
| FspI | TGCGCA | 1 cut(s) | 25 |
| GlaI | GCGC | 1 cut(s) | 25 |
| HhaI | GCGC | 1 cut(s) | 26 |
| Hin1II | CATG | 2 cut(s) | 24, 77 |
| Hin6I | GCGC | 1 cut(s) | 24 |
| HinP1I | GCGC | 1 cut(s) | 24 |
| HinfI | GANTC | 2 cut(s) | 34, 128 |
| Hpy188I | TCNGA | 3 cut(s) | 94, 148, 183 |
| Hpy188III | TCNNGA | 2 cut(s) | 110, 173 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 21 |
| HpyF3I | CTNAG | 1 cut(s) | 182 |
| Hsp92II | CATG | 2 cut(s) | 24, 77 |
| HspAI | GCGC | 1 cut(s) | 24 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 2 cut(s) | 3, 169 |
| LmnI | GCTCC | 2 cut(s) | 43, 118 |
| LpnPI | CCDG | 3 cut(s) | 66, 72, 123 |
| LweI | GCATC | 1 cut(s) | 185 |
| MaeI | CTAG | 2 cut(s) | 47, 59 |
| MalI | GATC | 2 cut(s) | 5, 171 |
| MboI | GATC | 2 cut(s) | 3, 169 |
| MfeI | CAATTG | 1 cut(s) | 38 |
| MhlI | GDGCHC | 2 cut(s) | 99, 141 |
| MluCI | AATT | 3 cut(s) | 16, 38, 66 |
| MlyI | GAGTC | 1 cut(s) | 122 |
| MnlI | CCTC | 1 cut(s) | 118 |
| MslI | CAYNNNNRTG | 1 cut(s) | 204 |
| MunI | CAATTG | 1 cut(s) | 38 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 21 |
| NdeII | GATC | 2 cut(s) | 3, 169 |
| NheI | GCTAGC | 1 cut(s) | 46 |
| NlaIII | CATG | 2 cut(s) | 24, 77 |
| NsbI | TGCGCA | 1 cut(s) | 25 |
| PfeI | GAWTC | 1 cut(s) | 34 |
| PleI | GAGTC | 1 cut(s) | 122 |
| PpsI | GAGTC | 1 cut(s) | 122 |
| PspPI | GGNCC | 1 cut(s) | 107 |
| RseI | CAYNNNNRTG | 1 cut(s) | 204 |
| Sau3AI | GATC | 2 cut(s) | 3, 169 |
| Sau96I | GGNCC | 1 cut(s) | 107 |
| SchI | GAGTC | 1 cut(s) | 122 |
| SduI | GDGCHC | 2 cut(s) | 99, 141 |
| SetI | ASST | 1 cut(s) | 48 |
| SfaNI | GCATC | 1 cut(s) | 185 |
| SinI | GGWCC | 1 cut(s) | 107 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 204 |
| Sse9I | AATT | 3 cut(s) | 16, 38, 66 |
| SspMI | CTAG | 2 cut(s) | 47, 59 |
| TasI | AATT | 3 cut(s) | 16, 38, 66 |
| TfiI | GAWTC | 1 cut(s) | 34 |
| TspDTI | ATGAA | 2 cut(s) | 9, 62 |
| VpaK11BI | GGWCC | 1 cut(s) | 107 |
| XapI | RAATTY | 1 cut(s) | 66 |
| XspI | CTAG | 2 cut(s) | 47, 59 |