The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21720 AT1G77440 AT1G77440 |
| fragaria_vesca | FvH4_2g27460 |
| malus_domestica | MD00G1028400.v1.1 MD15G1344700.v1.1 |
| prunus_persica | Prupe.1G492900_v2.0.a1 |
| pyrus_communis | pycom08g13680 pycom15g30930 |
| rosa_chinensis | RchiOBHm_Chr2g0103031 RchiOBHm_Chr2g0140351 RchiOBHm_Chr4g0425031 RchiOBHm_Chr5g0069521 RchiOBHm_Chr6g0296301 |
| rosa_laevigata | RLG00000003407 RLG00000011708 RLG00000019374 |
| rosa_multiflora | Rmu_co8088830.1_g000001 Rmu_sc0000388.1_g000016 Rmu_sc0004708.1_g000006 Rmu_sc0022551.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00139980 Rroxscaffold_7G00171650 Rroxscaffold_7G00178420 |
| rosa_rugosa | Rorug02G0111500 Rorug04G0057000 Rorug05G0263600 Rorug06G0260800 |
| rosa_samantha | Rh1BG051400 Rh2CG166500 Rh6BG194900 Rh6BG380500 Rh6DG172500 Rh7DG016200 |
| rosa_wichuraiana | Rw2G012490 Rw4G002730 Rw6G032480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 179 |
| AccIII | TCCGGA | 1 cut(s) | 367 |
| AciI | CCGC | 2 cut(s) | 44, 554 |
| AclWI | GGATC | 1 cut(s) | 121 |
| AcoI | YGGCCR | 1 cut(s) | 160 |
| AcsI | RAATTY | 2 cut(s) | 49, 70 |
| AcuI | CTGAAG | 1 cut(s) | 558 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 81, 448, 628 |
| AflIII | ACRYGT | 1 cut(s) | 267 |
| AgsI | TTSAA | 2 cut(s) | 54, 457 |
| AjnI | CCWGG | 2 cut(s) | 162, 447 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 683, 715 |
| AleI | CACNNNNGTG | 1 cut(s) | 389 |
| AluBI | AGCT | 6 cut(s) | 193, 401, 460, 496, 795, 803 |
| AluI | AGCT | 6 cut(s) | 193, 401, 460, 496, 795, 803 |
| Alw21I | GWGCWC | 1 cut(s) | 805 |
| Alw26I | GTCTC | 1 cut(s) | 206 |
| AlwI | GGATC | 1 cut(s) | 121 |
| Aor13HI | TCCGGA | 1 cut(s) | 367 |
| AoxI | GGCC | 2 cut(s) | 160, 737 |
| ApoI | RAATTY | 2 cut(s) | 49, 70 |
| AspS9I | GGNCC | 1 cut(s) | 166 |
| AvaII | GGWCC | 1 cut(s) | 166 |
| BalI | TGGCCA | 1 cut(s) | 162 |
| BanII | GRGCYC | 1 cut(s) | 805 |
| BbsI | GAAGAC | 1 cut(s) | 178 |
| Bbv12I | GWGCWC | 1 cut(s) | 805 |
| BccI | CCATC | 5 cut(s) | 317, 389, 493, 659, 805 |
| BceAI | ACGGC | 1 cut(s) | 533 |
| BciT130I | CCWGG | 2 cut(s) | 164, 449 |
| BciVI | GTATCC | 1 cut(s) | 631 |
| BcoDI | GTCTC | 1 cut(s) | 206 |
| BfuI | GTATCC | 1 cut(s) | 631 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 554 |
| BisI | GCNGC | 1 cut(s) | 555 |
| BlsI | GCNGC | 1 cut(s) | 556 |
| Bme1390I | CCNGG | 2 cut(s) | 164, 449 |
| Bme18I | GGWCC | 1 cut(s) | 166 |
| BmgT120I | GGNCC | 1 cut(s) | 166 |
| BmrFI | CCNGG | 2 cut(s) | 164, 449 |
| BmsI | GCATC | 2 cut(s) | 535, 708 |
| BpiI | GAAGAC | 1 cut(s) | 178 |
| Bpu10I | CCTNAGC | 1 cut(s) | 626 |
| BsaJI | CCNNGG | 2 cut(s) | 237, 447 |
| BsaWI | WCCGGW | 2 cut(s) | 81, 367 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 203, 218, 233, 248, 534, 564 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 81, 448, 628 |
| Bse118I | RCCGGY | 1 cut(s) | 621 |
| Bse1I | ACTGG | 1 cut(s) | 597 |
| BseAI | TCCGGA | 1 cut(s) | 367 |
| BseBI | CCWGG | 2 cut(s) | 164, 449 |
| BseDI | CCNNGG | 2 cut(s) | 237, 447 |
| BseGI | GGATG | 1 cut(s) | 495 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 81, 448, 628 |
| BseMII | CTCAG | 2 cut(s) | 48, 640 |
| BseNI | ACTGG | 1 cut(s) | 597 |
| BseRI | GAGGAG | 2 cut(s) | 440, 614 |
| BshFI | GGCC | 2 cut(s) | 162, 739 |
| BsiHKAI | GWGCWC | 1 cut(s) | 805 |
| BsiSI | CCGG | 3 cut(s) | 82, 368, 622 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 81, 448, 628 |
| BsmAI | GTCTC | 1 cut(s) | 206 |
| BsmBI | CGTCTC | 1 cut(s) | 206 |
| BsnI | GGCC | 2 cut(s) | 162, 739 |
| Bsp1286I | GDGCHC | 1 cut(s) | 805 |
| Bsp13I | TCCGGA | 1 cut(s) | 367 |
| Bsp143I | GATC | 2 cut(s) | 126, 479 |
| BspACI | CCGC | 2 cut(s) | 44, 554 |
| BspANI | GGCC | 2 cut(s) | 162, 739 |
| BspCNI | CTCAG | 2 cut(s) | 47, 639 |
| BspEI | TCCGGA | 1 cut(s) | 367 |
| BspHI | TCATGA | 1 cut(s) | 564 |
| BspPI | GGATC | 1 cut(s) | 121 |
| BsrFI | RCCGGY | 1 cut(s) | 621 |
| BsrI | ACTGG | 1 cut(s) | 597 |
| BssAI | RCCGGY | 1 cut(s) | 621 |
| BssECI | CCNNGG | 2 cut(s) | 237, 447 |
| BssMI | GATC | 2 cut(s) | 126, 479 |
| BssT1I | CCWWGG | 1 cut(s) | 237 |
| Bst2UI | CCWGG | 2 cut(s) | 164, 449 |
| Bst4CI | ACNGT | 4 cut(s) | 19, 341, 562, 643 |
| BstC8I | GCNNGC | 1 cut(s) | 775 |
| BstDEI | CTNAG | 2 cut(s) | 34, 626 |
| BstF5I | GGATG | 1 cut(s) | 495 |
| BstKTI | GATC | 2 cut(s) | 129, 482 |
| BstMAI | GTCTC | 1 cut(s) | 206 |
| BstMBI | GATC | 2 cut(s) | 126, 479 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 554 |
| BstNI | CCWGG | 2 cut(s) | 164, 449 |
| BstNSI | RCATGY | 1 cut(s) | 143 |
| BstSCI | CCNGG | 2 cut(s) | 162, 447 |
| BstV2I | GAAGAC | 1 cut(s) | 178 |
| BstX2I | RGATCY | 1 cut(s) | 126 |
| BstYI | RGATCY | 1 cut(s) | 126 |
| BsuI | GTATCC | 1 cut(s) | 631 |
| BsuRI | GGCC | 2 cut(s) | 162, 739 |
| BtgZI | GCGATG | 1 cut(s) | 671 |
| BtsCI | GGATG | 1 cut(s) | 495 |
| BtsI | GCAGTG | 1 cut(s) | 279 |
| BtsIMutI | CAGTG | 2 cut(s) | 24, 279 |
| Cac8I | GCNNGC | 1 cut(s) | 775 |
| CciI | TCATGA | 1 cut(s) | 564 |
| Cfr10I | RCCGGY | 1 cut(s) | 621 |
| Cfr13I | GGNCC | 1 cut(s) | 166 |
| CseI | GACGC | 1 cut(s) | 258 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 35 |
| CviAII | CATG | 3 cut(s) | 140, 443, 565 |
| DdeI | CTNAG | 2 cut(s) | 34, 626 |
| DpnI | GATC | 2 cut(s) | 128, 481 |
| DpnII | GATC | 2 cut(s) | 126, 479 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 179 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 179 |
| EaeI | YGGCCR | 1 cut(s) | 160 |
| Ecl136II | GAGCTC | 1 cut(s) | 803 |
| Eco130I | CCWWGG | 1 cut(s) | 237 |
| Eco147I | AGGCCT | 1 cut(s) | 739 |
| Eco24I | GRGCYC | 1 cut(s) | 805 |
| Eco47I | GGWCC | 1 cut(s) | 166 |
| Eco53kI | GAGCTC | 1 cut(s) | 803 |
| Eco57I | CTGAAG | 1 cut(s) | 558 |
| EcoICRI | GAGCTC | 1 cut(s) | 803 |
| EcoRII | CCWGG | 2 cut(s) | 162, 447 |
| EcoT14I | CCWWGG | 1 cut(s) | 237 |
| EcoT38I | GRGCYC | 1 cut(s) | 805 |
| ErhI | CCWWGG | 1 cut(s) | 237 |
| Esp3I | CGTCTC | 1 cut(s) | 206 |
| FaeI | CATG | 3 cut(s) | 143, 446, 568 |
| FatI | CATG | 3 cut(s) | 139, 442, 564 |
| FauI | CCCGC | 1 cut(s) | 51 |
| Fnu4HI | GCNGC | 1 cut(s) | 555 |
| FokI | GGATG | 1 cut(s) | 502 |
| FriOI | GRGCYC | 1 cut(s) | 805 |
| Fsp4HI | GCNGC | 1 cut(s) | 555 |
| GluI | GCNGC | 1 cut(s) | 555 |
| HaeIII | GGCC | 2 cut(s) | 162, 739 |
| HapII | CCGG | 3 cut(s) | 82, 368, 622 |
| HgaI | GACGC | 1 cut(s) | 258 |
| Hin1II | CATG | 3 cut(s) | 143, 446, 568 |
| HindIII | AAGCTT | 2 cut(s) | 399, 458 |
| HinfI | GANTC | 1 cut(s) | 328 |
| HpaII | CCGG | 3 cut(s) | 82, 368, 622 |
| Hpy166II | GTNNAC | 1 cut(s) | 818 |
| Hpy188I | TCNGA | 3 cut(s) | 126, 248, 807 |
| Hpy188III | TCNNGA | 2 cut(s) | 368, 565 |
| Hpy8I | GTNNAC | 1 cut(s) | 818 |
| Hpy99I | CGWCG | 2 cut(s) | 185, 252 |
| HpyAV | CCTTC | 1 cut(s) | 533 |
| HpyCH4III | ACNGT | 4 cut(s) | 19, 341, 562, 643 |
| HpyCH4IV | ACGT | 1 cut(s) | 267 |
| HpyCH4V | TGCA | 3 cut(s) | 106, 114, 721 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 554 |
| HpyF3I | CTNAG | 2 cut(s) | 34, 626 |
| HpySE526I | ACGT | 1 cut(s) | 267 |
| Hsp92II | CATG | 3 cut(s) | 143, 446, 568 |
| Kpn2I | TCCGGA | 1 cut(s) | 367 |
| Kzo9I | GATC | 2 cut(s) | 126, 479 |
| LmnI | GCTCC | 3 cut(s) | 212, 792, 800 |
| LweI | GCATC | 2 cut(s) | 535, 708 |
| MaeII | ACGT | 1 cut(s) | 267 |
| MaeIII | GTNAC | 1 cut(s) | 748 |
| MalI | GATC | 2 cut(s) | 128, 481 |
| MboI | GATC | 2 cut(s) | 126, 479 |
| MboII | GAAGA | 3 cut(s) | 178, 188, 739 |
| MflI | RGATCY | 1 cut(s) | 126 |
| MhlI | GDGCHC | 1 cut(s) | 805 |
| MlsI | TGGCCA | 1 cut(s) | 162 |
| MluCI | AATT | 2 cut(s) | 49, 70 |
| MluNI | TGGCCA | 1 cut(s) | 162 |
| MmeI | TCCRAC | 2 cut(s) | 234, 271 |
| Mox20I | TGGCCA | 1 cut(s) | 162 |
| MroI | TCCGGA | 1 cut(s) | 367 |
| MscI | TGGCCA | 1 cut(s) | 162 |
| MseI | TTAA | 2 cut(s) | 618, 675 |
| MslI | CAYNNNNRTG | 1 cut(s) | 389 |
| Msp20I | TGGCCA | 1 cut(s) | 162 |
| MspI | CCGG | 3 cut(s) | 82, 368, 622 |
| MspR9I | CCNGG | 2 cut(s) | 164, 449 |
| MvaI | CCWGG | 2 cut(s) | 164, 449 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 554 |
| NdeII | GATC | 2 cut(s) | 126, 479 |
| NlaIII | CATG | 3 cut(s) | 143, 446, 568 |
| NspI | RCATGY | 1 cut(s) | 143 |
| OliI | CACNNNNGTG | 1 cut(s) | 389 |
| PagI | TCATGA | 1 cut(s) | 564 |
| PceI | AGGCCT | 1 cut(s) | 739 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 186 |
| PfeI | GAWTC | 1 cut(s) | 328 |
| PkrI | GCNGC | 1 cut(s) | 556 |
| Psp124BI | GAGCTC | 1 cut(s) | 805 |
| Psp6I | CCWGG | 2 cut(s) | 162, 447 |
| PspGI | CCWGG | 2 cut(s) | 162, 447 |
| PspPI | GGNCC | 1 cut(s) | 166 |
| PsuI | RGATCY | 1 cut(s) | 126 |
| RseI | CAYNNNNRTG | 1 cut(s) | 389 |
| SacI | GAGCTC | 1 cut(s) | 805 |
| SaqAI | TTAA | 2 cut(s) | 618, 675 |
| SatI | GCNGC | 1 cut(s) | 555 |
| Sau3AI | GATC | 2 cut(s) | 126, 479 |
| Sau96I | GGNCC | 1 cut(s) | 166 |
| ScrFI | CCNGG | 2 cut(s) | 164, 449 |
| SduI | GDGCHC | 1 cut(s) | 805 |
| SfaNI | GCATC | 2 cut(s) | 535, 708 |
| SinI | GGWCC | 1 cut(s) | 166 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 389 |
| Sse9I | AATT | 2 cut(s) | 49, 70 |
| SseBI | AGGCCT | 1 cut(s) | 739 |
| SsiI | CCGC | 2 cut(s) | 44, 554 |
| SstI | GAGCTC | 1 cut(s) | 805 |
| StuI | AGGCCT | 1 cut(s) | 739 |
| StyD4I | CCNGG | 2 cut(s) | 162, 447 |
| StyI | CCWWGG | 1 cut(s) | 237 |
| TaaI | ACNGT | 4 cut(s) | 19, 341, 562, 643 |
| TaiI | ACGT | 1 cut(s) | 270 |
| TaqI | TCGA | 2 cut(s) | 189, 473 |
| TasI | AATT | 2 cut(s) | 49, 70 |
| TauI | GCSGC | 1 cut(s) | 557 |
| TfiI | GAWTC | 1 cut(s) | 328 |
| Tru1I | TTAA | 2 cut(s) | 618, 675 |
| Tru9I | TTAA | 2 cut(s) | 618, 675 |
| TscAI | CASTG | 2 cut(s) | 24, 286 |
| TspDTI | ATGAA | 5 cut(s) | 410, 506, 543, 704, 759 |
| TspGWI | ACGGA | 1 cut(s) | 502 |
| TspRI | CASTG | 2 cut(s) | 24, 286 |
| VpaK11BI | GGWCC | 1 cut(s) | 166 |
| XapI | RAATTY | 2 cut(s) | 49, 70 |
| XceI | RCATGY | 1 cut(s) | 143 |