RchiOBHm_Chr7g0183411

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
4306548 .. 4308697
2150 bp
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UTR
Exon/CDS
Intron
PRQ16364

Sequence Viewer

Length: 192 bp
ATGAGATGCAGCTACAAGGAATTGGTTTCTATTTGGAAAAGAAGTTGTGGGCTTGTGCGTGTGCCTTTGGAATTGGATGAAGTATCGAAAGTCGAGAACGAATCTGATTGTGGACAAGCACTCCATATCCAGTGTGCAGGTTTCGAGCATGTGGTCGAGGAGTGTACAGAGAAGGCACATGGCTCGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

7.04

Weight (kDa)

5.22

Isoelectric Point (pI)

52.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 128
AfaI GTAC 1 cut(s) 166
AluBI AGCT 1 cut(s) 12
AluI AGCT 1 cut(s) 12
ApeKI GCWGC 1 cut(s) 9
BbvI GCAGC 1 cut(s) 21
BcgI CGANNNNNNTGC 1 cut(s) 165
BfuAI ACCTGC 1 cut(s) 128
BisI GCNGC 1 cut(s) 10
BlsI GCNGC 1 cut(s) 11
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bse1I ACTGG 1 cut(s) 130
BseGI GGATG 1 cut(s) 82
BseNI ACTGG 1 cut(s) 130
BseRI GAGGAG 1 cut(s) 173
BseXI GCAGC 1 cut(s) 21
BsgI GTGCAG 1 cut(s) 156
Bsp1407I TGTACA 1 cut(s) 164
BspMI ACCTGC 1 cut(s) 128
BsrGI TGTACA 1 cut(s) 164
BsrI ACTGG 1 cut(s) 130
BstAUI TGTACA 1 cut(s) 164
BstF5I GGATG 1 cut(s) 82
BstNSI RCATGY 1 cut(s) 152
BstV1I GCAGC 1 cut(s) 21
BtsCI GGATG 1 cut(s) 82
BtsIMutI CAGTG 1 cut(s) 137
BveI ACCTGC 1 cut(s) 128
Csp6I GTAC 1 cut(s) 165
CviAII CATG 2 cut(s) 149, 179
CviJI RGCY 4 cut(s) 12, 52, 183, 188
CviKI_1 RGCY 4 cut(s) 12, 52, 183, 188
CviQI GTAC 1 cut(s) 165
FaeI CATG 2 cut(s) 152, 182
FaiI YATR 3 cut(s) 126, 150, 180
FatI CATG 2 cut(s) 148, 178
Fnu4HI GCNGC 1 cut(s) 10
FokI GGATG 1 cut(s) 89
Fsp4HI GCNGC 1 cut(s) 10
GluI GCNGC 1 cut(s) 10
Hin1II CATG 2 cut(s) 152, 182
HinfI GANTC 1 cut(s) 101
Hpy166II GTNNAC 2 cut(s) 113, 165
Hpy188I TCNGA 1 cut(s) 106
Hpy188III TCNNGA 1 cut(s) 94
Hpy8I GTNNAC 2 cut(s) 113, 165
HpyAV CCTTC 1 cut(s) 166
HpyCH4V TGCA 2 cut(s) 9, 137
Hsp92II CATG 2 cut(s) 152, 182
LpnPI CCDG 2 cut(s) 123, 143
Lsp1109I GCAGC 1 cut(s) 21
MluCI AATT 2 cut(s) 20, 71
MnlI CCTC 1 cut(s) 151
NlaIII CATG 2 cut(s) 152, 182
NmeAIII GCCGAG 1 cut(s) 164
NspI RCATGY 1 cut(s) 152
PfeI GAWTC 1 cut(s) 101
PkrI GCNGC 1 cut(s) 11
RsaI GTAC 1 cut(s) 166
RsaNI GTAC 1 cut(s) 165
SatI GCNGC 1 cut(s) 10
SetI ASST 2 cut(s) 14, 142
Sse9I AATT 2 cut(s) 20, 71
TaqI TCGA 4 cut(s) 86, 93, 144, 156
TasI AATT 2 cut(s) 20, 71
TatI WGTACW 1 cut(s) 164
TfiI GAWTC 1 cut(s) 101
TscAI CASTG 1 cut(s) 137
TseI GCWGC 1 cut(s) 9
TspDTI ATGAA 1 cut(s) 93
TspRI CASTG 1 cut(s) 137
XceI RCATGY 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.