No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0341661 RchiOBHm_Chr3g0485461 RchiOBHm_Chr3g0496711 RchiOBHm_Chr3g0497561 RchiOBHm_Chr4g0399861 RchiOBHm_Chr5g0049551 RchiOBHm_Chr5g0056221 RchiOBHm_Chr5g0079661 RchiOBHm_Chr6g0245421 RchiOBHm_Chr6g0251521 RchiOBHm_Chr6g0271331 RchiOBHm_Chr6g0273341 RchiOBHm_Chr7g0183411 RchiOBHm_Chr7g0207781 RchiOBHm_Chr7g0234061 |
| rosa_laevigata | RLG00000019701 |
| rosa_multiflora | Rmu_sc0002986.1_g000038 |
| rosa_roxburghii | Rroxscaffold_176G00431310 Rroxscaffold_1G00025630 Rroxscaffold_1G00032450 Rroxscaffold_3G00218140 Rroxscaffold_4G00319190 Rroxscaffold_5G00364950 Rroxscaffold_5G00372490 Rroxscaffold_6G00405160 Rroxscaffold_7G00163910 |
| rosa_rugosa | Rorug05G0249500 Rorug05G0555600 Rorug06G0344700 |
| rosa_samantha | Rh2BG593000 Rh4DG246600 |
| rosa_wichuraiana | Rw0G005310 Rw1G015120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 84 |
| AjnI | CCWGG | 1 cut(s) | 83 |
| Alw21I | GWGCWC | 1 cut(s) | 20 |
| Alw44I | GTGCAC | 1 cut(s) | 16 |
| ApaLI | GTGCAC | 1 cut(s) | 16 |
| ApeKI | GCWGC | 1 cut(s) | 123 |
| AsuHPI | GGTGA | 1 cut(s) | 85 |
| AsuII | TTCGAA | 1 cut(s) | 28 |
| BaeGI | GKGCMC | 1 cut(s) | 20 |
| Bbv12I | GWGCWC | 1 cut(s) | 20 |
| BbvI | GCAGC | 1 cut(s) | 110 |
| BciT130I | CCWGG | 1 cut(s) | 85 |
| BclI | TGATCA | 1 cut(s) | 37 |
| BisI | GCNGC | 1 cut(s) | 124 |
| BlsI | GCNGC | 1 cut(s) | 125 |
| Bme1390I | CCNGG | 1 cut(s) | 85 |
| BmrFI | CCNGG | 1 cut(s) | 85 |
| Bpu14I | TTCGAA | 1 cut(s) | 28 |
| BpuEI | CTTGAG | 1 cut(s) | 118 |
| BsaJI | CCNNGG | 1 cut(s) | 84 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 59, 89 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 84 |
| BseBI | CCWGG | 1 cut(s) | 85 |
| BseDI | CCNNGG | 1 cut(s) | 84 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 84 |
| BseSI | GKGCMC | 1 cut(s) | 20 |
| BseXI | GCAGC | 1 cut(s) | 110 |
| BsiHKAI | GWGCWC | 1 cut(s) | 20 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 84 |
| Bsp119I | TTCGAA | 1 cut(s) | 28 |
| Bsp1286I | GDGCHC | 1 cut(s) | 20 |
| Bsp143I | GATC | 1 cut(s) | 37 |
| BspT104I | TTCGAA | 1 cut(s) | 28 |
| BssECI | CCNNGG | 1 cut(s) | 84 |
| BssMI | GATC | 1 cut(s) | 37 |
| Bst2UI | CCWGG | 1 cut(s) | 85 |
| BstBI | TTCGAA | 1 cut(s) | 28 |
| BstKTI | GATC | 1 cut(s) | 40 |
| BstMBI | GATC | 1 cut(s) | 37 |
| BstNI | CCWGG | 1 cut(s) | 85 |
| BstNSI | RCATGY | 1 cut(s) | 16 |
| BstSCI | CCNGG | 1 cut(s) | 83 |
| BstSLI | GKGCMC | 1 cut(s) | 20 |
| BstV1I | GCAGC | 1 cut(s) | 110 |
| CviAII | CATG | 1 cut(s) | 13 |
| CviJI | RGCY | 2 cut(s) | 123, 138 |
| CviKI_1 | RGCY | 2 cut(s) | 123, 138 |
| DpnI | GATC | 1 cut(s) | 39 |
| DpnII | GATC | 1 cut(s) | 37 |
| EcoRII | CCWGG | 1 cut(s) | 83 |
| FaeI | CATG | 1 cut(s) | 16 |
| FaiI | YATR | 2 cut(s) | 14, 80 |
| FatI | CATG | 1 cut(s) | 12 |
| FbaI | TGATCA | 1 cut(s) | 37 |
| Fnu4HI | GCNGC | 1 cut(s) | 124 |
| Fsp4HI | GCNGC | 1 cut(s) | 124 |
| GluI | GCNGC | 1 cut(s) | 124 |
| Hin1II | CATG | 1 cut(s) | 16 |
| HinfI | GANTC | 2 cut(s) | 5, 25 |
| HphI | GGTGA | 1 cut(s) | 85 |
| Hpy166II | GTNNAC | 2 cut(s) | 18, 67 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 146 |
| Hpy8I | GTNNAC | 2 cut(s) | 18, 67 |
| HpyCH4V | TGCA | 1 cut(s) | 18 |
| Hsp92II | CATG | 1 cut(s) | 16 |
| Ksp22I | TGATCA | 1 cut(s) | 37 |
| Kzo9I | GATC | 1 cut(s) | 37 |
| LpnPI | CCDG | 3 cut(s) | 70, 97, 120 |
| Lsp1109I | GCAGC | 1 cut(s) | 110 |
| MalI | GATC | 1 cut(s) | 39 |
| MboI | GATC | 1 cut(s) | 37 |
| MboII | GAAGA | 1 cut(s) | 121 |
| MhlI | GDGCHC | 1 cut(s) | 20 |
| MnlI | CCTC | 1 cut(s) | 93 |
| MspR9I | CCNGG | 1 cut(s) | 85 |
| MvaI | CCWGG | 1 cut(s) | 85 |
| NdeII | GATC | 1 cut(s) | 37 |
| NlaIII | CATG | 1 cut(s) | 16 |
| NspI | RCATGY | 1 cut(s) | 16 |
| NspV | TTCGAA | 1 cut(s) | 28 |
| PfeI | GAWTC | 2 cut(s) | 5, 25 |
| PkrI | GCNGC | 1 cut(s) | 125 |
| Psp6I | CCWGG | 1 cut(s) | 83 |
| PspGI | CCWGG | 1 cut(s) | 83 |
| SatI | GCNGC | 1 cut(s) | 124 |
| Sau3AI | GATC | 1 cut(s) | 37 |
| ScrFI | CCNGG | 1 cut(s) | 85 |
| SduI | GDGCHC | 1 cut(s) | 20 |
| SetI | ASST | 2 cut(s) | 98, 104 |
| SfuI | TTCGAA | 1 cut(s) | 28 |
| SmlI | CTYRAG | 1 cut(s) | 97 |
| SmoI | CTYRAG | 1 cut(s) | 97 |
| StyD4I | CCNGG | 1 cut(s) | 83 |
| TaqI | TCGA | 2 cut(s) | 8, 28 |
| TfiI | GAWTC | 2 cut(s) | 5, 25 |
| TseI | GCWGC | 1 cut(s) | 123 |
| VneI | GTGCAC | 1 cut(s) | 16 |
| XceI | RCATGY | 1 cut(s) | 16 |