No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0341661 RchiOBHm_Chr3g0485461 RchiOBHm_Chr3g0496711 RchiOBHm_Chr3g0497561 RchiOBHm_Chr4g0399861 RchiOBHm_Chr5g0049551 RchiOBHm_Chr5g0056221 RchiOBHm_Chr5g0079661 RchiOBHm_Chr6g0245421 RchiOBHm_Chr6g0251521 RchiOBHm_Chr6g0271331 RchiOBHm_Chr6g0273341 RchiOBHm_Chr7g0183411 RchiOBHm_Chr7g0207781 RchiOBHm_Chr7g0234061 |
| rosa_laevigata | RLG00000019701 |
| rosa_multiflora | Rmu_sc0002986.1_g000038 |
| rosa_roxburghii | Rroxscaffold_176G00431310 Rroxscaffold_1G00025630 Rroxscaffold_1G00032450 Rroxscaffold_3G00218140 Rroxscaffold_4G00319190 Rroxscaffold_5G00364950 Rroxscaffold_5G00372490 Rroxscaffold_6G00405160 Rroxscaffold_7G00163910 |
| rosa_rugosa | Rorug05G0249500 Rorug05G0555600 Rorug06G0344700 |
| rosa_samantha | Rh2BG593000 Rh4DG246600 |
| rosa_wichuraiana | Rw0G005310 Rw1G015120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 136 |
| AciI | CCGC | 1 cut(s) | 5 |
| AfaI | GTAC | 1 cut(s) | 174 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 118 |
| AgsI | TTSAA | 1 cut(s) | 256 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 25, 57 |
| Alw21I | GWGCWC | 1 cut(s) | 129 |
| AoxI | GGCC | 2 cut(s) | 22, 189 |
| ApeKI | GCWGC | 1 cut(s) | 17 |
| AspS9I | GGNCC | 2 cut(s) | 190, 238 |
| AsuC2I | CCSGG | 1 cut(s) | 193 |
| AvaII | GGWCC | 1 cut(s) | 238 |
| Bbv12I | GWGCWC | 1 cut(s) | 129 |
| BbvI | GCAGC | 1 cut(s) | 29 |
| BcnI | CCSGG | 1 cut(s) | 193 |
| BfuAI | ACCTGC | 1 cut(s) | 136 |
| BisI | GCNGC | 1 cut(s) | 18 |
| BlsI | GCNGC | 1 cut(s) | 19 |
| Bme1390I | CCNGG | 1 cut(s) | 193 |
| Bme18I | GGWCC | 1 cut(s) | 238 |
| BmgT120I | GGNCC | 2 cut(s) | 190, 238 |
| BmiI | GGNNCC | 1 cut(s) | 240 |
| BmrFI | CCNGG | 1 cut(s) | 193 |
| BpuMI | CCSGG | 1 cut(s) | 193 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 113, 143 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 118 |
| Bse118I | RCCGGY | 1 cut(s) | 20 |
| Bse1I | ACTGG | 1 cut(s) | 138 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BseNI | ACTGG | 1 cut(s) | 138 |
| BseXI | GCAGC | 1 cut(s) | 29 |
| BsgI | GTGCAG | 1 cut(s) | 164 |
| BshFI | GGCC | 2 cut(s) | 24, 191 |
| BsiHKAI | GWGCWC | 1 cut(s) | 129 |
| BsiSI | CCGG | 2 cut(s) | 21, 193 |
| BslFI | GGGAC | 1 cut(s) | 224 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 118 |
| BsmFI | GGGAC | 1 cut(s) | 224 |
| BsnI | GGCC | 2 cut(s) | 24, 191 |
| Bsp1286I | GDGCHC | 1 cut(s) | 129 |
| Bsp143I | GATC | 1 cut(s) | 91 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 2 cut(s) | 24, 191 |
| BspLI | GGNNCC | 1 cut(s) | 240 |
| BspMI | ACCTGC | 1 cut(s) | 136 |
| BsrFI | RCCGGY | 1 cut(s) | 20 |
| BsrI | ACTGG | 1 cut(s) | 138 |
| BssAI | RCCGGY | 1 cut(s) | 20 |
| BssMI | GATC | 1 cut(s) | 91 |
| Bst6I | CTCTTC | 1 cut(s) | 46 |
| BstC8I | GCNNGC | 1 cut(s) | 22 |
| BstKTI | GATC | 1 cut(s) | 94 |
| BstMBI | GATC | 1 cut(s) | 91 |
| BstNSI | RCATGY | 1 cut(s) | 160 |
| BstSCI | CCNGG | 1 cut(s) | 191 |
| BstV1I | GCAGC | 1 cut(s) | 29 |
| BsuRI | GGCC | 2 cut(s) | 24, 191 |
| BtsIMutI | CAGTG | 1 cut(s) | 145 |
| BveI | ACCTGC | 1 cut(s) | 136 |
| Cac8I | GCNNGC | 1 cut(s) | 22 |
| Cfr10I | RCCGGY | 1 cut(s) | 20 |
| Cfr13I | GGNCC | 2 cut(s) | 190, 238 |
| Csp6I | GTAC | 1 cut(s) | 173 |
| CviAII | CATG | 3 cut(s) | 75, 157, 187 |
| CviJI | RGCY | 4 cut(s) | 20, 24, 191, 196 |
| CviKI_1 | RGCY | 4 cut(s) | 20, 24, 191, 196 |
| CviQI | GTAC | 1 cut(s) | 173 |
| DpnI | GATC | 1 cut(s) | 93 |
| DpnII | GATC | 1 cut(s) | 91 |
| Eam1104I | CTCTTC | 1 cut(s) | 46 |
| EarI | CTCTTC | 1 cut(s) | 46 |
| Eco47I | GGWCC | 1 cut(s) | 238 |
| FaeI | CATG | 3 cut(s) | 78, 160, 190 |
| FaiI | YATR | 5 cut(s) | 70, 76, 134, 158, 188 |
| FaqI | GGGAC | 1 cut(s) | 224 |
| FatI | CATG | 3 cut(s) | 74, 156, 186 |
| Fnu4HI | GCNGC | 1 cut(s) | 18 |
| Fsp4HI | GCNGC | 1 cut(s) | 18 |
| GluI | GCNGC | 1 cut(s) | 18 |
| HaeIII | GGCC | 2 cut(s) | 24, 191 |
| HapII | CCGG | 2 cut(s) | 21, 193 |
| Hin1II | CATG | 3 cut(s) | 78, 160, 190 |
| HinfI | GANTC | 2 cut(s) | 28, 33 |
| HpaII | CCGG | 2 cut(s) | 21, 193 |
| Hpy166II | GTNNAC | 2 cut(s) | 58, 121 |
| Hpy188I | TCNGA | 1 cut(s) | 249 |
| Hpy188III | TCNNGA | 1 cut(s) | 165 |
| Hpy8I | GTNNAC | 2 cut(s) | 58, 121 |
| HpyAV | CCTTC | 1 cut(s) | 223 |
| HpyCH4V | TGCA | 2 cut(s) | 72, 145 |
| Hsp92II | CATG | 3 cut(s) | 78, 160, 190 |
| KroI | GCCGGC | 1 cut(s) | 20 |
| KroNI | GCCGGC | 1 cut(s) | 22 |
| Kzo9I | GATC | 1 cut(s) | 91 |
| LpnPI | CCDG | 6 cut(s) | 34, 38, 131, 151, 161, 206 |
| Lsp1109I | GCAGC | 1 cut(s) | 29 |
| MalI | GATC | 1 cut(s) | 93 |
| MboI | GATC | 1 cut(s) | 91 |
| MboII | GAAGA | 1 cut(s) | 63 |
| MhlI | GDGCHC | 1 cut(s) | 129 |
| MnlI | CCTC | 1 cut(s) | 174 |
| MroNI | GCCGGC | 1 cut(s) | 20 |
| MspI | CCGG | 2 cut(s) | 21, 193 |
| MspR9I | CCNGG | 1 cut(s) | 193 |
| NaeI | GCCGGC | 1 cut(s) | 22 |
| NciI | CCSGG | 1 cut(s) | 193 |
| NdeII | GATC | 1 cut(s) | 91 |
| NgoMIV | GCCGGC | 1 cut(s) | 20 |
| NlaIII | CATG | 3 cut(s) | 78, 160, 190 |
| NlaIV | GGNNCC | 1 cut(s) | 240 |
| NspI | RCATGY | 1 cut(s) | 160 |
| PdiI | GCCGGC | 1 cut(s) | 22 |
| PfeI | GAWTC | 2 cut(s) | 28, 33 |
| PkrI | GCNGC | 1 cut(s) | 19 |
| PspN4I | GGNNCC | 1 cut(s) | 240 |
| PspPI | GGNCC | 2 cut(s) | 190, 238 |
| RsaI | GTAC | 1 cut(s) | 174 |
| RsaNI | GTAC | 1 cut(s) | 173 |
| SatI | GCNGC | 1 cut(s) | 18 |
| Sau3AI | GATC | 1 cut(s) | 91 |
| Sau96I | GGNCC | 2 cut(s) | 190, 238 |
| ScrFI | CCNGG | 1 cut(s) | 193 |
| SduI | GDGCHC | 1 cut(s) | 129 |
| SetI | ASST | 1 cut(s) | 150 |
| SinI | GGWCC | 1 cut(s) | 238 |
| SsiI | CCGC | 1 cut(s) | 5 |
| StyD4I | CCNGG | 1 cut(s) | 191 |
| TaqI | TCGA | 3 cut(s) | 31, 94, 152 |
| TfiI | GAWTC | 2 cut(s) | 28, 33 |
| TscAI | CASTG | 1 cut(s) | 145 |
| TseI | GCWGC | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 145 |
| VpaK11BI | GGWCC | 1 cut(s) | 238 |
| XceI | RCATGY | 1 cut(s) | 160 |