Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001266

Physical Location & Seq

Genomic Coordinates Reverse (-)

35221632 .. 35226799

Gene Structure 5168 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19450

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGATTATCAGCAGTAGCGTCCGGACATGTTTCCCGCGCTTTCCATCCTCGTCGGAGACGCATGTTTTCCGGTCGGCAGTCAAGTTTACTTTCACTCTCCGGCGGCGACTTTTCACCACCTTGTGCTCTGTTTCGGCCACCCAGAAGAAGGAGAAGGAGAAGGTGATAGTGGTATCGGGGCCCACCGGAGCCGGGAAGAGCCGGCTGGCACTCGAGCTCGCCAAGGTGCTCAACGGCGAGATTATCAGCGCCGACTCTGTCCAGGTATATCGGGGTCTTGACGTTGGATCAGCGAAACCTTCTCCAAGTGATAGAAAGGAAGTACCACATCATCTGGTTGACATATTGCACCCATCTGAAGACTACTCCGTTGGACAATTTTATGAGGATGCAAGGCAAACTACAAGATGTATTCTTGATAATGGCCGTGTTCCCATAGTTACTGGTGGCACTGGATTGTACTTGCGATGGTTAATATATGGAAAACCAGATGTTCCTAAAGCCTCAAAAGAGATCGCATCTGAAGTGTCTTCTGAGTTGGCAGATTTAGAAAGAAATGGACACTGGGATGCAGCTGTGCAGTTGGTGATCAAAGCAGGTGACCCTAAGGCTCAATTTTTGGCTGCTAATGATTGGTACCGATTAAGACGCAGCCTGGAGATCATCAAGTCTAGTGGATCACCTCCATCTGCCTTCGAAGTACCGTATAATTCTTTCCGCAAAGAATGTGATTCTAGTGTAGTAGACACTAATGACATTAGTTCCTCTGCTGATGTTGTGGAGGAAGTTAAATCAAAGGAATTGAACTATGACTTCATTTGCTTTTTCCTCTCAAACCAAAGGGTTGATCTATACAGATCAATTGATTGGCGATGTGAAGATATGGTGTCAGGAACTGATGGTATCTTGTCTGAGGCCAGATGGCTTCTTGATGCGGGTCTTCTTCCAAATTCCAATTCAGCAACCAGAGCAATTGGTTATAGACAAGCTATGGAGTATTTATTATTGTGTAGGGAGCAAGGAGGTAGTTCTTCACCAAGAGAGTTCTACAACTTTTTGACTGAATTTCAAAAGGCATCTAGAAATTTTGCAAAACGGCAATTGACATGGTTTCGTAATGAGCATATCTATCACTGGCTTGACGCTTCCAAACCCTTGGATACTGTTCTAAACTTTATTTGTGATGCATACCATGACAAAAGTGGAAATTGGGTTGTGCCTGAATCACTGCAAATGAAGAAAGAATTATTAAGCCGCCGAGAAGAGTCTGAACTAAAGAGCTATCGAACTAAGAACAGGCATTTTATCAGACGTGAAGATTGTTCAGATATTCTAAACTGGATACAGAAAACACAAGGTCTGAAACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0052381 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

456

Amino Acids

51.86

Weight (kDa)

8.43

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPT	PF01745	54 - 104	2.4e-06	Isopentenyl transferase
IPPT	PF01715	88 - 374	1.5e-60	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001266)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20040 AT5G20040 AT5G20040
fragaria_vesca	FvH4_3g18660 FvH4_3g18660 FvH4_3g18660 FvH4_3g18660 FvH4_3g18660
malus_domestica	MD03G1240200.v1.1 MD11G1259500.v1.1
prunus_persica	Prupe.4G170400_v2.0.a1 Prupe.4G170400_v2.0.a1
pyrus_communis	pycom03g18540 pycom11g22930
rosa_chinensis	RchiOBHm_Chr0c28g0500971 RchiOBHm_Chr0c28g0501011 RchiOBHm_Chr0c28g0501061 RchiOBHm_Chr1g0325431 RchiOBHm_Chr3g0490501 RchiOBHm_Chr5g0031481 RchiOBHm_Chr5g0052511 RchiOBHm_Chr6g0273141 RchiOBHm_Chr7g0217341 RchiOBHm_Chr7g0243571 RchiOBHm_Chr7g0243611
rosa_laevigata	RLG00000002491 RLG00000015074 RLG00000033314
rosa_multiflora	Rmu_sc0000404.1_g000011 Rmu_ssc0000480.1_g000027
rosa_roxburghii	Rroxscaffold_1G00026620 Rroxscaffold_1G00039590 Rroxscaffold_1G00048840 Rroxscaffold_3G00242320 Rroxscaffold_3G00242330 Rroxscaffold_3G00247160
rosa_rugosa	Rorug05G0126200 Rorug07G0168200 Rorug07G0168200 Rorug07G0168300
rosa_samantha	Rh1DG073200 Rh4AG212400 Rh5CG242100 Rh5CG469300 Rh5DG224000 Rh5DG370500 Rh7BG298500 Rh7CG171500 Rh7CG326700 Rh7DG307000
rosa_wichuraiana	Rw0G010090 Rw4G018030 Rw5G019980 Rw7G026100 Rw7G036750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	587
Acc36I	ACCTGC	1 cut(s)	587
Acc65I	GGTACC	1 cut(s)	636
AccB1I	GGYRCC	1 cut(s)	636
AccI	GTMKAC	1 cut(s)	744
AccII	CGCG	1 cut(s)	37
AccIII	TCCGGA	1 cut(s)	21
AciI	CCGC	5 cut(s)	35, 103, 718, 935, 1255
AclWI	GGATC	2 cut(s)	295, 685
AcoI	YGGCCR	2 cut(s)	135, 424
AcsI	RAATTY	3 cut(s)	949, 1064, 1084
AcuI	CTGAAG	2 cut(s)	378, 543
AdeI	CACNNNGTG	1 cut(s)	123
AfaI	GTAC	4 cut(s)	324, 461, 638, 702
AfiI	CCNNNNNNNGG	2 cut(s)	148, 192
AflIII	ACRYGT	1 cut(s)	26
AgsI	TTSAA	2 cut(s)	805, 1070
AjiI	CACGTC	1 cut(s)	1313
AjnI	CCWGG	2 cut(s)	261, 654
AjuI	GAANNNNNNNTTGG	2 cut(s)	940, 972
AluBI	AGCT	4 cut(s)	217, 575, 989, 1281
AluI	AGCT	4 cut(s)	217, 575, 989, 1281
Alw21I	GWGCWC	3 cut(s)	128, 219, 231
Alw26I	GTCTC	1 cut(s)	50
AlwI	GGATC	2 cut(s)	295, 685
AlwNI	CAGNNNCTG	1 cut(s)	896
Ama87I	CYCGRG	1 cut(s)	212
Aor13HI	TCCGGA	1 cut(s)	21
AoxI	GGCC	4 cut(s)	135, 179, 424, 915
ApaI	GGGCCC	1 cut(s)	183
ApeKI	GCWGC	3 cut(s)	572, 623, 651
ApoI	RAATTY	3 cut(s)	949, 1064, 1084
Asp718I	GGTACC	1 cut(s)	636
AspLEI	GCGC	2 cut(s)	39, 251
AspS9I	GGNCC	2 cut(s)	179, 180
AsuC2I	CCSGG	1 cut(s)	193
AsuHPI	GGTGA	6 cut(s)	106, 175, 598, 611, 672, 1026
AsuII	TTCGAA	1 cut(s)	696
AvaI	CYCGRG	1 cut(s)	212
AxyI	CCTNAGG	1 cut(s)	606
BaeGI	GKGCMC	1 cut(s)	183
BanI	GGYRCC	1 cut(s)	636
BanII	GRGCYC	2 cut(s)	183, 219
BbsI	GAAGAC	3 cut(s)	366, 522, 932
Bbv12I	GWGCWC	3 cut(s)	128, 219, 231
BbvI	GCAGC	3 cut(s)	584, 610, 663
BccI	CCATC	6 cut(s)	52, 361, 462, 694, 893, 915
BceAI	ACGGC	3 cut(s)	250, 411, 1112
BciT130I	CCWGG	2 cut(s)	263, 656
BciVI	GTATCC	2 cut(s)	1153, 1335
BclI	TGATCA	1 cut(s)	588
BcnI	CCSGG	1 cut(s)	193
BcoDI	GTCTC	1 cut(s)	50
BfaI	CTAG	3 cut(s)	672, 735, 1080
BfoI	RGCGCY	1 cut(s)	252
BfuAI	ACCTGC	1 cut(s)	587
BfuI	GTATCC	2 cut(s)	1153, 1335
BisI	GCNGC	5 cut(s)	104, 573, 624, 652, 1255
BlsI	GCNGC	5 cut(s)	105, 574, 625, 653, 1256
Bme1390I	CCNGG	3 cut(s)	193, 263, 656
BmeT110I	CYCGRG	1 cut(s)	212
BmgBI	CACGTC	1 cut(s)	1313
BmgT120I	GGNCC	2 cut(s)	179, 180
BmiI	GGNNCC	4 cut(s)	180, 181, 190, 638
BmrFI	CCNGG	3 cut(s)	193, 263, 656
BmrI	ACTGGG	1 cut(s)	574
BmsI	GCATC	6 cut(s)	379, 527, 559, 922, 1085, 1174
BmuI	ACTGGG	1 cut(s)	574
BpiI	GAAGAC	3 cut(s)	366, 522, 932
BpmI	CTGGAG	1 cut(s)	677
Bpu14I	TTCGAA	1 cut(s)	696
BpuMI	CCSGG	1 cut(s)	193
BsaJI	CCNNGG	2 cut(s)	222, 1155
BsaWI	WCCGGW	3 cut(s)	21, 69, 185
Bsc4I	CCNNNNNNNGG	2 cut(s)	148, 192
Bse118I	RCCGGY	1 cut(s)	201
Bse1I	ACTGG	5 cut(s)	448, 457, 569, 1139, 1343
Bse21I	CCTNAGG	1 cut(s)	606
BseAI	TCCGGA	1 cut(s)	21
BseBI	CCWGG	2 cut(s)	263, 656
BseDI	CCNNGG	2 cut(s)	222, 1155
BseGI	GGATG	3 cut(s)	44, 394, 574
BseLI	CCNNNNNNNGG	2 cut(s)	148, 192
BseMII	CTCAG	2 cut(s)	525, 903
BseNI	ACTGG	5 cut(s)	448, 457, 569, 1139, 1343
BseSI	GKGCMC	1 cut(s)	183
BseXI	GCAGC	3 cut(s)	584, 610, 663
BsgI	GTGCAG	1 cut(s)	599
Bsh1236I	CGCG	1 cut(s)	37
Bsh1285I	CGRYCG	1 cut(s)	74
BshFI	GGCC	4 cut(s)	137, 181, 426, 917
BshNI	GGYRCC	1 cut(s)	636
BsiEI	CGRYCG	1 cut(s)	74
BsiHKAI	GWGCWC	3 cut(s)	128, 219, 231
BsiHKCI	CYCGRG	1 cut(s)	212
BsiSI	CCGG	6 cut(s)	22, 70, 100, 186, 192, 202
BslI	CCNNNNNNNGG	2 cut(s)	148, 192
BsmAI	GTCTC	1 cut(s)	50
BsmBI	CGTCTC	1 cut(s)	50
BsnI	GGCC	4 cut(s)	137, 181, 426, 917
BsoBI	CYCGRG	1 cut(s)	212
Bsp119I	TTCGAA	1 cut(s)	696
Bsp120I	GGGCCC	1 cut(s)	179
Bsp1286I	GDGCHC	4 cut(s)	128, 183, 219, 231
Bsp13I	TCCGGA	1 cut(s)	21
Bsp143I	GATC	7 cut(s)	287, 513, 588, 660, 677, 847, 857
BspACI	CCGC	5 cut(s)	35, 103, 718, 935, 1255
BspANI	GGCC	4 cut(s)	137, 181, 426, 917
BspCNI	CTCAG	2 cut(s)	526, 904
BspEI	TCCGGA	1 cut(s)	21
BspFNI	CGCG	1 cut(s)	37
BspLI	GGNNCC	4 cut(s)	180, 181, 190, 638
BspMI	ACCTGC	1 cut(s)	587
BspPI	GGATC	2 cut(s)	295, 685
BspQI	GCTCTTC	1 cut(s)	191
BspT104I	TTCGAA	1 cut(s)	696
BspT107I	GGYRCC	1 cut(s)	636
BsrFI	RCCGGY	1 cut(s)	201
BsrI	ACTGG	5 cut(s)	448, 457, 569, 1139, 1343
BssAI	RCCGGY	1 cut(s)	201
BssECI	CCNNGG	2 cut(s)	222, 1155
BssMI	GATC	7 cut(s)	287, 513, 588, 660, 677, 847, 857
BssT1I	CCWWGG	2 cut(s)	222, 1155
Bst2UI	CCWGG	2 cut(s)	263, 656
Bst4CI	ACNGT	2 cut(s)	705, 1165
Bst6I	CTCTTC	2 cut(s)	191, 1257
BstBI	TTCGAA	1 cut(s)	696
BstC8I	GCNNGC	3 cut(s)	203, 207, 219
BstDEI	CTNAG	4 cut(s)	534, 606, 912, 1290
BstEII	GGTNACC	1 cut(s)	599
BstF5I	GGATG	3 cut(s)	44, 394, 574
BstFNI	CGCG	1 cut(s)	37
BstH2I	RGCGCY	1 cut(s)	252
BstHHI	GCGC	2 cut(s)	39, 251
BstKTI	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
BstMAI	GTCTC	1 cut(s)	50
BstMBI	GATC	7 cut(s)	287, 513, 588, 660, 677, 847, 857
BstMCI	CGRYCG	1 cut(s)	74
BstMWI	GCNNNNNNNGC	1 cut(s)	968
BstNI	CCWGG	2 cut(s)	263, 656
BstNSI	RCATGY	2 cut(s)	30, 65
BstPI	GGTNACC	1 cut(s)	599
BstSCI	CCNGG	3 cut(s)	191, 261, 654
BstSLI	GKGCMC	1 cut(s)	183
BstUI	CGCG	1 cut(s)	37
BstV1I	GCAGC	3 cut(s)	584, 610, 663
BstV2I	GAAGAC	3 cut(s)	366, 522, 932
BstXI	CCANNNNNNTGG	1 cut(s)	1156
Bsu36I	CCTNAGG	1 cut(s)	606
BsuI	GTATCC	2 cut(s)	1153, 1335
BsuRI	GGCC	4 cut(s)	137, 181, 426, 917
BtgZI	GCGATG	2 cut(s)	481, 886
BtrI	CACGTC	1 cut(s)	1313
BtsCI	GGATG	3 cut(s)	44, 394, 574
BtsI	GCAGTG	1 cut(s)	1226
BtsIMutI	CAGTG	4 cut(s)	450, 562, 1132, 1226
BveI	ACCTGC	1 cut(s)	587
Cac8I	GCNNGC	3 cut(s)	203, 207, 219
CaiI	CAGNNNCTG	1 cut(s)	896
CfoI	GCGC	2 cut(s)	39, 251
Cfr10I	RCCGGY	1 cut(s)	201
Cfr13I	GGNCC	2 cut(s)	179, 180
CseI	GACGC	4 cut(s)	7, 67, 657, 1151
Csp6I	GTAC	4 cut(s)	323, 460, 637, 701
CspCI	CAANNNNNGTGG	2 cut(s)	655, 690
CviAII	CATG	4 cut(s)	27, 62, 1107, 1193
CviQI	GTAC	4 cut(s)	323, 460, 637, 701
DdeI	CTNAG	4 cut(s)	534, 606, 912, 1290
DpnI	GATC	7 cut(s)	289, 515, 590, 662, 679, 849, 859
DpnII	GATC	7 cut(s)	287, 513, 588, 660, 677, 847, 857
DraIII	CACNNNGTG	1 cut(s)	123
EaeI	YGGCCR	2 cut(s)	135, 424
Eam1104I	CTCTTC	2 cut(s)	191, 1257
EarI	CTCTTC	2 cut(s)	191, 1257
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	2 cut(s)	222, 1155
Eco24I	GRGCYC	2 cut(s)	183, 219
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	2 cut(s)	378, 543
Eco81I	CCTNAGG	1 cut(s)	606
Eco88I	CYCGRG	1 cut(s)	212
Eco91I	GGTNACC	1 cut(s)	599
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	179
EcoO65I	GGTNACC	1 cut(s)	599
EcoRII	CCWGG	2 cut(s)	261, 654
EcoT14I	CCWWGG	2 cut(s)	222, 1155
EcoT22I	ATGCAT	1 cut(s)	1189
EcoT38I	GRGCYC	2 cut(s)	183, 219
ErhI	CCWWGG	2 cut(s)	222, 1155
Esp3I	CGTCTC	1 cut(s)	50
FaeI	CATG	4 cut(s)	30, 65, 1110, 1196
FatI	CATG	4 cut(s)	26, 61, 1106, 1192
FauI	CCCGC	2 cut(s)	42, 928
FbaI	TGATCA	1 cut(s)	588
FblI	GTMKAC	1 cut(s)	744
Fnu4HI	GCNGC	5 cut(s)	104, 573, 624, 652, 1255
FokI	GGATG	3 cut(s)	31, 401, 581
FriOI	GRGCYC	2 cut(s)	183, 219
Fsp4HI	GCNGC	5 cut(s)	104, 573, 624, 652, 1255
FspBI	CTAG	3 cut(s)	672, 735, 1080
GlaI	GCGC	2 cut(s)	38, 250
GluI	GCNGC	5 cut(s)	104, 573, 624, 652, 1255
GsuI	CTGGAG	1 cut(s)	677
HaeII	RGCGCY	1 cut(s)	252
HaeIII	GGCC	4 cut(s)	137, 181, 426, 917
HapII	CCGG	6 cut(s)	22, 70, 100, 186, 192, 202
HgaI	GACGC	4 cut(s)	7, 67, 657, 1151
HhaI	GCGC	2 cut(s)	39, 251
Hin1II	CATG	4 cut(s)	30, 65, 1110, 1196
Hin6I	GCGC	2 cut(s)	37, 249
HinP1I	GCGC	2 cut(s)	37, 249
HincII	GTYRAC	1 cut(s)	340
HindII	GTYRAC	1 cut(s)	340
HinfI	GANTC	4 cut(s)	254, 731, 1223, 1265
HpaII	CCGG	6 cut(s)	22, 70, 100, 186, 192, 202
HphI	GGTGA	6 cut(s)	106, 175, 598, 611, 672, 1026
Hpy166II	GTNNAC	3 cut(s)	87, 340, 745
Hpy188I	TCNGA	9 cut(s)	55, 358, 523, 535, 913, 1270, 1310, 1327, 1362
Hpy188III	TCNNGA	6 cut(s)	22, 278, 416, 891, 929, 1080
Hpy8I	GTNNAC	3 cut(s)	87, 340, 745
Hpy99I	CGWCG	1 cut(s)	55
HpyAV	CCTTC	5 cut(s)	142, 148, 154, 309, 703
HpyCH4III	ACNGT	2 cut(s)	705, 1165
HpyCH4IV	ACGT	2 cut(s)	282, 1312
HpyCH4V	TGCA	7 cut(s)	349, 392, 572, 580, 1091, 1187, 1231
HpyF10VI	GCNNNNNNNGC	1 cut(s)	968
HpyF3I	CTNAG	4 cut(s)	534, 606, 912, 1290
HpySE526I	ACGT	2 cut(s)	282, 1312
Hsp92II	CATG	4 cut(s)	30, 65, 1110, 1196
HspAI	GCGC	2 cut(s)	37, 249
Kpn2I	TCCGGA	1 cut(s)	21
KpnI	GGTACC	1 cut(s)	640
KroI	GCCGGC	1 cut(s)	201
KroNI	GCCGGC	1 cut(s)	203
Ksp22I	TGATCA	1 cut(s)	588
Kzo9I	GATC	7 cut(s)	287, 513, 588, 660, 677, 847, 857
LguI	GCTCTTC	1 cut(s)	191
LmnI	GCTCC	2 cut(s)	188, 1015
Lsp1109I	GCAGC	3 cut(s)	584, 610, 663
LweI	GCATC	6 cut(s)	379, 527, 559, 922, 1085, 1174
MaeI	CTAG	3 cut(s)	672, 735, 1080
MaeII	ACGT	2 cut(s)	282, 1312
MaeIII	GTNAC	2 cut(s)	439, 599
MalI	GATC	7 cut(s)	289, 515, 590, 662, 679, 849, 859
MboI	GATC	7 cut(s)	287, 513, 588, 660, 677, 847, 857
MfeI	CAATTG	3 cut(s)	861, 972, 1100
MhlI	GDGCHC	4 cut(s)	128, 183, 219, 231
MlyI	GAGTC	2 cut(s)	248, 1274
MmeI	TCCRAC	3 cut(s)	33, 265, 352
MnlI	CCTC	9 cut(s)	58, 379, 514, 693, 775, 775, 839, 907, 1016
Mph1103I	ATGCAT	1 cut(s)	1189
MroI	TCCGGA	1 cut(s)	21
MroNI	GCCGGC	1 cut(s)	201
MseI	TTAA	4 cut(s)	473, 644, 789, 1250
MslI	CAYNNNNRTG	1 cut(s)	567
MspA1I	CMGCKG	1 cut(s)	575
MspI	CCGG	6 cut(s)	22, 70, 100, 186, 192, 202
MspR9I	CCNGG	3 cut(s)	193, 263, 656
MunI	CAATTG	3 cut(s)	861, 972, 1100
MvaI	CCWGG	2 cut(s)	263, 656
MvnI	CGCG	1 cut(s)	37
MwoI	GCNNNNNNNGC	1 cut(s)	968
NaeI	GCCGGC	1 cut(s)	203
NciI	CCSGG	1 cut(s)	193
NdeII	GATC	7 cut(s)	287, 513, 588, 660, 677, 847, 857
NgoMIV	GCCGGC	1 cut(s)	201
NlaIII	CATG	4 cut(s)	30, 65, 1110, 1196
NlaIV	GGNNCC	4 cut(s)	180, 181, 190, 638
NmeAIII	GCCGAG	1 cut(s)	1283
NmuCI	GTSAC	1 cut(s)	599
NsiI	ATGCAT	1 cut(s)	1189
NspI	RCATGY	2 cut(s)	30, 65
NspV	TTCGAA	1 cut(s)	696
PaeR7I	CTCGAG	1 cut(s)	212
PaqCI	CACCTGC	1 cut(s)	587
PciI	ACATGT	1 cut(s)	26
PciSI	GCTCTTC	1 cut(s)	191
PdiI	GCCGGC	1 cut(s)	203
PfeI	GAWTC	2 cut(s)	731, 1223
PflFI	GACNNNGTC	1 cut(s)	257
PkrI	GCNGC	5 cut(s)	105, 574, 625, 653, 1256
PleI	GAGTC	2 cut(s)	248, 1273
PpsI	GAGTC	2 cut(s)	248, 1273
PscI	ACATGT	1 cut(s)	26
Psp124BI	GAGCTC	1 cut(s)	219
Psp6I	CCWGG	2 cut(s)	261, 654
PspEI	GGTNACC	1 cut(s)	599
PspGI	CCWGG	2 cut(s)	261, 654
PspN4I	GGNNCC	4 cut(s)	180, 181, 190, 638
PspOMI	GGGCCC	1 cut(s)	179
PspPI	GGNCC	2 cut(s)	179, 180
PspXI	VCTCGAGB	1 cut(s)	212
PstNI	CAGNNNCTG	1 cut(s)	896
PsyI	GACNNNGTC	1 cut(s)	257
PvuII	CAGCTG	1 cut(s)	575
RsaI	GTAC	4 cut(s)	324, 461, 638, 702
RsaNI	GTAC	4 cut(s)	323, 460, 637, 701
RseI	CAYNNNNRTG	1 cut(s)	567
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	1 cut(s)	191
SaqAI	TTAA	4 cut(s)	473, 644, 789, 1250
SatI	GCNGC	5 cut(s)	104, 573, 624, 652, 1255
Sau3AI	GATC	7 cut(s)	287, 513, 588, 660, 677, 847, 857
Sau96I	GGNCC	2 cut(s)	179, 180
SchI	GAGTC	2 cut(s)	248, 1274
ScrFI	CCNGG	3 cut(s)	193, 263, 656
SduI	GDGCHC	4 cut(s)	128, 183, 219, 231
SfaNI	GCATC	6 cut(s)	379, 527, 559, 922, 1085, 1174
Sfr274I	CTCGAG	1 cut(s)	212
SfuI	TTCGAA	1 cut(s)	696
SlaI	CTCGAG	1 cut(s)	212
SmiMI	CAYNNNNRTG	1 cut(s)	567
SmlI	CTYRAG	1 cut(s)	212
SmoI	CTYRAG	1 cut(s)	212
SsiI	CCGC	5 cut(s)	35, 103, 718, 935, 1255
SspMI	CTAG	3 cut(s)	672, 735, 1080
SstI	GAGCTC	1 cut(s)	219
StyD4I	CCNGG	3 cut(s)	191, 261, 654
StyI	CCWWGG	2 cut(s)	222, 1155
TaaI	ACNGT	2 cut(s)	705, 1165
TaiI	ACGT	2 cut(s)	285, 1315
TaqI	TCGA	3 cut(s)	213, 696, 1285
TatI	WGTACW	1 cut(s)	459
TauI	GCSGC	2 cut(s)	106, 1257
TfiI	GAWTC	2 cut(s)	731, 1223
Tru1I	TTAA	4 cut(s)	473, 644, 789, 1250
Tru9I	TTAA	4 cut(s)	473, 644, 789, 1250
TscAI	CASTG	4 cut(s)	457, 569, 1139, 1233
TseFI	GTSAC	1 cut(s)	599
TseI	GCWGC	3 cut(s)	572, 623, 651
Tsp45I	GTSAC	1 cut(s)	599
TspDTI	ATGAA	2 cut(s)	805, 1250
TspGWI	ACGGA	1 cut(s)	358
TspRI	CASTG	4 cut(s)	457, 569, 1139, 1233
Tth111I	GACNNNGTC	1 cut(s)	257
XapI	RAATTY	3 cut(s)	949, 1064, 1084
XbaI	TCTAGA	1 cut(s)	1079
XceI	RCATGY	2 cut(s)	30, 65
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1199
XhoI	CTCGAG	1 cut(s)	212
XmiI	GTMKAC	1 cut(s)	744
XspI	CTAG	3 cut(s)	672, 735, 1080
Zsp2I	ATGCAT	1 cut(s)	1189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.