Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001266

Physical Location & Seq

Genomic Coordinates Reverse (-)

11196399 .. 11198994

Gene Structure 2596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0126200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGAGAGAAATCCTCCACATCCAGGGCGGACAGTGCGGCAACCAAATCGGCGCCAAGTTCTGGGAAGTCATCTGCGACGAGCACGGCATCGACACCACCGGCCGTTACTGCGGCGACGCCGAGCTCCAGCTCGAGCGCATCAATGTCTATTACAACGAGGCCAGCGGCGGAAGGTACGTCCCACGCGCCATCTTGATGGATCTCGAGCCCGGCACCATGGACTCCGTCCGATCCGGCCCCTTCGGCCAGATTTTCAGGCCCGATAACTTCGTCTTCGGCCAGTCCGGGGCCGGGAACAACTGGGCCAAGGGCCATTATACTGAAGGCGCCGAGCTCATCGATTCCGTTCTTGATGTCGTCCGTAAGGAAGCTGAGAATTGCGATTGCCTACAGGGATTTCAAGTGTGTCATTCTTTGGGTGGTGGCACTGGCTCAGGGATGGGAACTCTTCTTATTTCAAAGATCAGGGAGGAGTACCCAGATCGGATGATGCTGACATTTTCGGTCTTTCCTTCTCCAAAGGTGTCGGACACGGTTGTGGAGCCGTACAATGCGACCCTTTCCGTGCACCAGCTTGTAGAAAATGCTGATGAATGTATGGTTTTGGACAATGAGGCTCTGTATGACATCTGCTTTCGGACTCTCAAGCTTGCCACCCCTACTTTTGGTGATCTTAACCACCTAATCTCTGCCACCATGAGTGGTGTCACATGCTGTCTTCGGTTCCCTGGACAGCTGAACTCTGACCTTCGAAAGCTTGCAGTCAACCTTATCCCTTTTCCGCGTCTCCATTTCTTTATGGTTGGGTTTGCACCCCTGACCTCAAGAGGATCACAGCAGTACCGTTCTCTGACTGTGCCCGAGTTGACTCAGCAGATGTGGGATGCCAAAAACATGATGTGTGCTGCTGATCCACGCCATGGACGTTACCTTACTGCTTCTGCCATGTTCCGTGGTAAGATGAGCACCAAAGAAGTTGATGAACAGATGATTAACGTCCAGAACAAGAACTCCTCATACTTTGTTGAGTGGATTCCCAATAATGTCAAGTCCAGTGTGTGTGACATCCCACCAAAGGGTTTGGCAATGGCTTCCACTTTTATTGGGAACTCAACTTCCATCCAGGAAATGTTCAGGAGGGTTAGTGAGCAATTCACAGCTATGTTCAGGCGAAAGGCTTTCTTACATTGGTACACTGGGGAGGGAATGGATGAGATGGAGTTCACCGAGGCTGAGAGTAACATGAATGATCTGGTGGCTGAGTACCAGCAATACCAGGATGCAACTGCCGAGTATGAGGAGGAGTATGAGGAGGAGGAAGAGGAGGTTGCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0052381 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

445

Amino Acids

50.03

Weight (kDa)

4.76

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tubulin	PF00091	3 - 211	8.9e-65	Tubulin/FtsZ family, GTPase domain
Tubulin_C	PF03953	261 - 382	5e-40	Tubulin C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001266)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20040 AT5G20040 AT5G20040
fragaria_vesca	FvH4_3g18660 FvH4_3g18660 FvH4_3g18660 FvH4_3g18660 FvH4_3g18660
malus_domestica	MD03G1240200.v1.1 MD11G1259500.v1.1
prunus_persica	Prupe.4G170400_v2.0.a1 Prupe.4G170400_v2.0.a1
pyrus_communis	pycom03g18540 pycom11g22930
rosa_chinensis	RchiOBHm_Chr0c28g0500971 RchiOBHm_Chr0c28g0501011 RchiOBHm_Chr0c28g0501061 RchiOBHm_Chr1g0325431 RchiOBHm_Chr3g0490501 RchiOBHm_Chr5g0031481 RchiOBHm_Chr5g0052511 RchiOBHm_Chr6g0273141 RchiOBHm_Chr7g0217341 RchiOBHm_Chr7g0243571 RchiOBHm_Chr7g0243611
rosa_laevigata	RLG00000002491 RLG00000015074 RLG00000033314
rosa_multiflora	Rmu_sc0000404.1_g000011 Rmu_ssc0000480.1_g000027
rosa_roxburghii	Rroxscaffold_1G00026620 Rroxscaffold_1G00039590 Rroxscaffold_1G00048840 Rroxscaffold_3G00242320 Rroxscaffold_3G00242330 Rroxscaffold_3G00247160
rosa_rugosa	Rorug05G0126200 Rorug07G0168200 Rorug07G0168200 Rorug07G0168300
rosa_samantha	Rh1DG073200 Rh4AG212400 Rh5CG242100 Rh5CG469300 Rh5DG224000 Rh5DG370500 Rh7BG298500 Rh7CG171500 Rh7CG326700 Rh7DG307000
rosa_wichuraiana	Rw0G010090 Rw4G018030 Rw5G019980 Rw7G026100 Rw7G036750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	50, 212, 326
AccB7I	CCANNNNNTGG	2 cut(s)	60, 920
AccII	CGCG	2 cut(s)	186, 784
AciI	CCGC	6 cut(s)	27, 36, 111, 165, 168, 782
AclWI	GGATC	4 cut(s)	207, 225, 838, 905
AcoI	YGGCCR	3 cut(s)	100, 244, 277
AcuI	CTGAAG	1 cut(s)	342
AcyI	GRCGYC	3 cut(s)	51, 117, 327
AfaI	GTAC	6 cut(s)	176, 476, 548, 842, 1193, 1265
AfiI	CCNNNNNNNGG	8 cut(s)	22, 60, 286, 291, 665, 920, 1075, 1076
AgsI	TTSAA	2 cut(s)	401, 459
AjnI	CCWGG	4 cut(s)	21, 727, 1122, 1275
AleI	CACNNNNGTG	1 cut(s)	536
AloI	GAACNNNNNNTCC	4 cut(s)	995, 1027, 1100, 1132
AluBI	AGCT	9 cut(s)	124, 130, 334, 371, 574, 649, 736, 757, 1160
AluI	AGCT	9 cut(s)	124, 130, 334, 371, 574, 649, 736, 757, 1160
Alw21I	GWGCWC	5 cut(s)	84, 126, 336, 570, 968
Alw26I	GTCTC	1 cut(s)	791
Alw44I	GTGCAC	1 cut(s)	566
AlwI	GGATC	4 cut(s)	207, 225, 838, 905
Ama87I	CYCGRG	3 cut(s)	131, 203, 860
AoxI	GGCC	9 cut(s)	100, 159, 235, 244, 257, 277, 288, 303, 310
ApaLI	GTGCAC	1 cut(s)	566
ApeKI	GCWGC	2 cut(s)	905, 1331
AspLEI	GCGC	4 cut(s)	53, 138, 188, 329
AspS9I	GGNCC	5 cut(s)	236, 258, 288, 303, 310
AsuC2I	CCSGG	3 cut(s)	210, 286, 292
AsuHPI	GGTGA	2 cut(s)	680, 1216
AsuII	TTCGAA	1 cut(s)	751
AvaI	CYCGRG	3 cut(s)	131, 203, 860
BaeGI	GKGCMC	2 cut(s)	570, 861
BaeI	ACNNNNGTAYC	2 cut(s)	824, 857
BanI	GGYRCC	3 cut(s)	50, 212, 326
BanII	GRGCYC	3 cut(s)	126, 210, 336
BbsI	GAAGAC	2 cut(s)	265, 710
Bbv12I	GWGCWC	5 cut(s)	84, 126, 336, 570, 968
BbvI	GCAGC	2 cut(s)	892, 1318
BccI	CCATC	5 cut(s)	190, 197, 433, 1127, 1210
BceAI	ACGGC	3 cut(s)	87, 100, 529
BcgI	CGANNNNNNTGC	2 cut(s)	28, 62
BciT130I	CCWGG	4 cut(s)	23, 729, 1124, 1277
BcnI	CCSGG	3 cut(s)	210, 286, 292
BcoDI	GTCTC	1 cut(s)	791
BfmI	CTRYAG	1 cut(s)	389
BfoI	RGCGCY	2 cut(s)	54, 330
BglI	GCCNNNNNGGC	1 cut(s)	243
BisI	GCNGC	5 cut(s)	37, 112, 166, 906, 1332
BlsI	GCNGC	5 cut(s)	38, 113, 167, 907, 1333
Bme1390I	CCNGG	7 cut(s)	23, 210, 286, 292, 729, 1124, 1277
BmeT110I	CYCGRG	3 cut(s)	131, 203, 860
BmgT120I	GGNCC	5 cut(s)	236, 258, 288, 303, 310
BmiI	GGNNCC	7 cut(s)	52, 214, 238, 289, 328, 543, 725
BmrFI	CCNGG	7 cut(s)	23, 210, 286, 292, 729, 1124, 1277
BmrI	ACTGGG	2 cut(s)	310, 1206
BmsI	GCATC	5 cut(s)	96, 147, 480, 874, 1270
BmuI	ACTGGG	2 cut(s)	310, 1206
BpiI	GAAGAC	2 cut(s)	265, 710
BplI	GAGNNNNNCTC	1 cut(s)	29
BpmI	CTGGAG	1 cut(s)	110
Bpu10I	CCTNAGC	1 cut(s)	433
Bpu14I	TTCGAA	1 cut(s)	751
BpuEI	CTTGAG	2 cut(s)	629, 808
BpuMI	CCSGG	3 cut(s)	210, 286, 292
Bsa29I	ATCGAT	1 cut(s)	339
BsaHI	GRCGYC	3 cut(s)	51, 117, 327
BsaJI	CCNNGG	8 cut(s)	22, 216, 285, 306, 727, 919, 952, 1227
BsaXI	ACNNNNNCTCC	4 cut(s)	995, 1025, 1129, 1159
Bsc4I	CCNNNNNNNGG	8 cut(s)	22, 60, 286, 291, 665, 920, 1075, 1076
Bse118I	RCCGGY	1 cut(s)	98
Bse1I	ACTGG	5 cut(s)	280, 305, 433, 1053, 1201
Bse3DI	GCAATG	1 cut(s)	1092
BseBI	CCWGG	4 cut(s)	23, 729, 1124, 1277
BseCI	ATCGAT	1 cut(s)	339
BseDI	CCNNGG	8 cut(s)	22, 216, 285, 306, 727, 919, 952, 1227
BseGI	GGATG	8 cut(s)	18, 444, 492, 889, 1065, 1119, 1216, 1285
BseLI	CCNNNNNNNGG	8 cut(s)	22, 60, 286, 291, 665, 920, 1075, 1076
BseMI	GCAATG	1 cut(s)	1092
BseMII	CTCAG	5 cut(s)	363, 447, 884, 1224, 1251
BseNI	ACTGG	5 cut(s)	280, 305, 433, 1053, 1201
BseRI	GAGGAG	7 cut(s)	485, 1003, 1313, 1316, 1325, 1328, 1337
BseSI	GKGCMC	2 cut(s)	570, 861
BseX3I	CGGCCG	1 cut(s)	100
BseXI	GCAGC	2 cut(s)	892, 1318
Bsh1236I	CGCG	2 cut(s)	186, 784
Bsh1285I	CGRYCG	1 cut(s)	103
BshFI	GGCC	9 cut(s)	102, 161, 237, 246, 259, 279, 290, 305, 312
BshNI	GGYRCC	3 cut(s)	50, 212, 326
BshVI	ATCGAT	1 cut(s)	339
BsiEI	CGRYCG	1 cut(s)	103
BsiHKAI	GWGCWC	5 cut(s)	84, 126, 336, 570, 968
BsiHKCI	CYCGRG	3 cut(s)	131, 203, 860
BsiSI	CCGG	5 cut(s)	99, 210, 234, 285, 291
BslFI	GGGAC	1 cut(s)	164
BslI	CCNNNNNNNGG	8 cut(s)	22, 60, 286, 291, 665, 920, 1075, 1076
BsmAI	GTCTC	1 cut(s)	791
BsmBI	CGTCTC	1 cut(s)	791
BsmFI	GGGAC	1 cut(s)	164
BsnI	GGCC	9 cut(s)	102, 161, 237, 246, 259, 279, 290, 305, 312
BsoBI	CYCGRG	3 cut(s)	131, 203, 860
Bsp119I	TTCGAA	1 cut(s)	751
Bsp1286I	GDGCHC	7 cut(s)	84, 126, 210, 336, 570, 861, 968
Bsp143I	GATC	8 cut(s)	199, 230, 462, 481, 670, 830, 910, 1249
Bsp19I	CCATGG	2 cut(s)	216, 919
BspACI	CCGC	6 cut(s)	27, 36, 111, 165, 168, 782
BspANI	GGCC	9 cut(s)	102, 161, 237, 246, 259, 279, 290, 305, 312
BspCNI	CTCAG	5 cut(s)	364, 446, 883, 1225, 1252
BspDI	ATCGAT	1 cut(s)	339
BspFNI	CGCG	2 cut(s)	186, 784
BspLI	GGNNCC	7 cut(s)	52, 214, 238, 289, 328, 543, 725
BspPI	GGATC	4 cut(s)	207, 225, 838, 905
BspT104I	TTCGAA	1 cut(s)	751
BspT107I	GGYRCC	3 cut(s)	50, 212, 326
BsrDI	GCAATG	1 cut(s)	1092
BsrFI	RCCGGY	1 cut(s)	98
BsrI	ACTGG	5 cut(s)	280, 305, 433, 1053, 1201
BssAI	RCCGGY	1 cut(s)	98
BssECI	CCNNGG	8 cut(s)	22, 216, 285, 306, 727, 919, 952, 1227
BssMI	GATC	8 cut(s)	199, 230, 462, 481, 670, 830, 910, 1249
BssNI	GRCGYC	3 cut(s)	51, 117, 327
BssT1I	CCWWGG	3 cut(s)	216, 306, 919
Bst2UI	CCWGG	4 cut(s)	23, 729, 1124, 1277
Bst4CI	ACNGT	4 cut(s)	33, 535, 845, 856
Bst6I	CTCTTC	2 cut(s)	453, 1314
BstACI	GRCGYC	3 cut(s)	51, 117, 327
BstBI	TTCGAA	1 cut(s)	751
BstC8I	GCNNGC	3 cut(s)	163, 651, 759
BstDEI	CTNAG	5 cut(s)	372, 433, 870, 1233, 1260
BstDSI	CCRYGG	3 cut(s)	216, 919, 952
BstF5I	GGATG	8 cut(s)	18, 444, 492, 889, 1065, 1119, 1216, 1285
BstFNI	CGCG	2 cut(s)	186, 784
BstH2I	RGCGCY	2 cut(s)	54, 330
BstHHI	GCGC	4 cut(s)	53, 138, 188, 329
BstKTI	GATC	8 cut(s)	202, 233, 465, 484, 673, 833, 913, 1252
BstMAI	GTCTC	1 cut(s)	791
BstMBI	GATC	8 cut(s)	199, 230, 462, 481, 670, 830, 910, 1249
BstMCI	CGRYCG	1 cut(s)	103
BstMWI	GCNNNNNNNGC	3 cut(s)	33, 108, 243
BstNI	CCWGG	4 cut(s)	23, 729, 1124, 1277
BstNSI	RCATGY	1 cut(s)	714
BstSCI	CCNGG	7 cut(s)	21, 208, 284, 290, 727, 1122, 1275
BstSFI	CTRYAG	1 cut(s)	389
BstSLI	GKGCMC	2 cut(s)	570, 861
BstUI	CGCG	2 cut(s)	186, 784
BstV1I	GCAGC	2 cut(s)	892, 1318
BstV2I	GAAGAC	2 cut(s)	265, 710
BstX2I	RGATCY	1 cut(s)	199
BstXI	CCANNNNNNTGG	1 cut(s)	196
BstYI	RGATCY	1 cut(s)	199
BstZI	CGGCCG	1 cut(s)	100
Bsu15I	ATCGAT	1 cut(s)	339
BsuRI	GGCC	9 cut(s)	102, 161, 237, 246, 259, 279, 290, 305, 312
BsuTUI	ATCGAT	1 cut(s)	339
BtgI	CCRYGG	3 cut(s)	216, 919, 952
BtsCI	GGATG	8 cut(s)	18, 444, 492, 889, 1065, 1119, 1216, 1285
BtsIMutI	CAGTG	4 cut(s)	38, 426, 1060, 1194
Cac8I	GCNNGC	3 cut(s)	163, 651, 759
CfoI	GCGC	4 cut(s)	53, 138, 188, 329
Cfr10I	RCCGGY	1 cut(s)	98
Cfr13I	GGNCC	5 cut(s)	236, 258, 288, 303, 310
ClaI	ATCGAT	1 cut(s)	339
CseI	GACGC	2 cut(s)	125, 773
Csp6I	GTAC	6 cut(s)	175, 475, 547, 841, 1192, 1264
CspCI	CAANNNNNGTGG	2 cut(s)	1084, 1119
CviAII	CATG	7 cut(s)	217, 697, 711, 895, 920, 946, 1243
CviQI	GTAC	6 cut(s)	175, 475, 547, 841, 1192, 1264
DdeI	CTNAG	5 cut(s)	372, 433, 870, 1233, 1260
DinI	GGCGCC	2 cut(s)	52, 328
DpnI	GATC	8 cut(s)	201, 232, 464, 483, 672, 832, 912, 1251
DpnII	GATC	8 cut(s)	199, 230, 462, 481, 670, 830, 910, 1249
EaeI	YGGCCR	3 cut(s)	100, 244, 277
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	2 cut(s)	453, 1314
EarI	CTCTTC	2 cut(s)	453, 1314
EciI	GGCGGA	2 cut(s)	42, 183
Ecl136II	GAGCTC	2 cut(s)	124, 334
EclXI	CGGCCG	1 cut(s)	100
Eco130I	CCWWGG	3 cut(s)	216, 306, 919
Eco24I	GRGCYC	3 cut(s)	126, 210, 336
Eco52I	CGGCCG	1 cut(s)	100
Eco53kI	GAGCTC	2 cut(s)	124, 334
Eco57I	CTGAAG	1 cut(s)	342
Eco88I	CYCGRG	3 cut(s)	131, 203, 860
EcoICRI	GAGCTC	2 cut(s)	124, 334
EcoRII	CCWGG	4 cut(s)	21, 727, 1122, 1275
EcoT14I	CCWWGG	3 cut(s)	216, 306, 919
EcoT38I	GRGCYC	3 cut(s)	126, 210, 336
EgeI	GGCGCC	2 cut(s)	52, 328
EheI	GGCGCC	2 cut(s)	52, 328
ErhI	CCWWGG	3 cut(s)	216, 306, 919
Esp3I	CGTCTC	1 cut(s)	791
FaeI	CATG	7 cut(s)	220, 700, 714, 898, 923, 949, 1246
FalI	AAGNNNNNCTT	2 cut(s)	1166, 1198
FaqI	GGGAC	1 cut(s)	164
FatI	CATG	7 cut(s)	216, 696, 710, 894, 919, 945, 1242
Fnu4HI	GCNGC	5 cut(s)	37, 112, 166, 906, 1332
FokI	GGATG	8 cut(s)	5, 451, 499, 896, 1052, 1106, 1223, 1292
FriOI	GRGCYC	3 cut(s)	126, 210, 336
Fsp4HI	GCNGC	5 cut(s)	37, 112, 166, 906, 1332
GlaI	GCGC	4 cut(s)	52, 137, 187, 328
GluI	GCNGC	5 cut(s)	37, 112, 166, 906, 1332
GsuI	CTGGAG	1 cut(s)	110
HaeII	RGCGCY	2 cut(s)	54, 330
HaeIII	GGCC	9 cut(s)	102, 161, 237, 246, 259, 279, 290, 305, 312
HapII	CCGG	5 cut(s)	99, 210, 234, 285, 291
HgaI	GACGC	2 cut(s)	125, 773
HhaI	GCGC	4 cut(s)	53, 138, 188, 329
Hin1I	GRCGYC	3 cut(s)	51, 117, 327
Hin1II	CATG	7 cut(s)	220, 700, 714, 898, 923, 949, 1246
Hin6I	GCGC	4 cut(s)	51, 136, 186, 327
HinP1I	GCGC	4 cut(s)	51, 136, 186, 327
HincII	GTYRAC	2 cut(s)	766, 867
HindII	GTYRAC	2 cut(s)	766, 867
HindIII	AAGCTT	2 cut(s)	647, 755
HinfI	GANTC	5 cut(s)	221, 341, 640, 868, 1033
HpaII	CCGG	5 cut(s)	99, 210, 234, 285, 291
HphI	GGTGA	2 cut(s)	680, 1216
Hpy166II	GTNNAC	5 cut(s)	568, 766, 867, 1194, 1224
Hpy188I	TCNGA	6 cut(s)	230, 486, 529, 639, 745, 852
Hpy188III	TCNNGA	6 cut(s)	193, 203, 350, 825, 1000, 1135
Hpy8I	GTNNAC	5 cut(s)	568, 766, 867, 1194, 1224
Hpy99I	CGWCG	2 cut(s)	80, 119
HpyAV	CCTTC	5 cut(s)	165, 250, 317, 522, 758
HpyCH4III	ACNGT	4 cut(s)	33, 535, 845, 856
HpyCH4IV	ACGT	3 cut(s)	177, 925, 996
HpyCH4V	TGCA	4 cut(s)	568, 761, 812, 1283
HpyF10VI	GCNNNNNNNGC	3 cut(s)	33, 108, 243
HpyF3I	CTNAG	5 cut(s)	372, 433, 870, 1233, 1260
HpySE526I	ACGT	3 cut(s)	177, 925, 996
Hsp92I	GRCGYC	3 cut(s)	51, 117, 327
Hsp92II	CATG	7 cut(s)	220, 700, 714, 898, 923, 949, 1246
HspAI	GCGC	4 cut(s)	51, 136, 186, 327
KasI	GGCGCC	2 cut(s)	50, 326
Kzo9I	GATC	8 cut(s)	199, 230, 462, 481, 670, 830, 910, 1249
LmnI	GCTCC	2 cut(s)	129, 541
Lsp1109I	GCAGC	2 cut(s)	892, 1318
LweI	GCATC	5 cut(s)	96, 147, 480, 874, 1270
MaeII	ACGT	3 cut(s)	177, 925, 996
MaeIII	GTNAC	5 cut(s)	104, 706, 926, 1061, 1238
MalI	GATC	8 cut(s)	201, 232, 464, 483, 672, 832, 912, 1251
MboI	GATC	8 cut(s)	199, 230, 462, 481, 670, 830, 910, 1249
MboII	GAAGA	4 cut(s)	265, 440, 710, 1331
MflI	RGATCY	1 cut(s)	199
MhlI	GDGCHC	7 cut(s)	84, 126, 210, 336, 570, 861, 968
MluCI	AATT	2 cut(s)	376, 1151
Mly113I	GGCGCC	2 cut(s)	51, 327
MlyI	GAGTC	3 cut(s)	215, 634, 862
MmeI	TCCRAC	1 cut(s)	507
MseI	TTAA	2 cut(s)	675, 993
MslI	CAYNNNNRTG	3 cut(s)	194, 536, 1160
MspA1I	CMGCKG	2 cut(s)	165, 736
MspI	CCGG	5 cut(s)	99, 210, 234, 285, 291
MspR9I	CCNGG	7 cut(s)	23, 210, 286, 292, 729, 1124, 1277
MvaI	CCWGG	4 cut(s)	23, 729, 1124, 1277
MvnI	CGCG	2 cut(s)	186, 784
MwoI	GCNNNNNNNGC	3 cut(s)	33, 108, 243
NarI	GGCGCC	2 cut(s)	51, 327
NciI	CCSGG	3 cut(s)	210, 286, 292
NcoI	CCATGG	2 cut(s)	216, 919
NdeII	GATC	8 cut(s)	199, 230, 462, 481, 670, 830, 910, 1249
NlaIII	CATG	7 cut(s)	220, 700, 714, 898, 923, 949, 1246
NlaIV	GGNNCC	7 cut(s)	52, 214, 238, 289, 328, 543, 725
NmeAIII	GCCGAG	3 cut(s)	145, 355, 1315
NmuCI	GTSAC	2 cut(s)	706, 1061
NspI	RCATGY	1 cut(s)	714
NspV	TTCGAA	1 cut(s)	751
OliI	CACNNNNGTG	1 cut(s)	536
PaeR7I	CTCGAG	2 cut(s)	131, 203
PcsI	WCGNNNNNNNCGW	1 cut(s)	922
PfeI	GAWTC	2 cut(s)	341, 1033
PflFI	GACNNNGTC	1 cut(s)	224
PflMI	CCANNNNNTGG	2 cut(s)	60, 920
PfoI	TCCNGGA	1 cut(s)	1122
PkrI	GCNGC	5 cut(s)	38, 113, 167, 907, 1333
PleI	GAGTC	3 cut(s)	215, 634, 862
PluTI	GGCGCC	2 cut(s)	54, 330
PpsI	GAGTC	3 cut(s)	215, 634, 862
Psp124BI	GAGCTC	2 cut(s)	126, 336
Psp6I	CCWGG	4 cut(s)	21, 727, 1122, 1275
PspGI	CCWGG	4 cut(s)	21, 727, 1122, 1275
PspN4I	GGNNCC	7 cut(s)	52, 214, 238, 289, 328, 543, 725
PspPI	GGNCC	5 cut(s)	236, 258, 288, 303, 310
PspXI	VCTCGAGB	1 cut(s)	131
PsrI	GAACNNNNNNTAC	2 cut(s)	1001, 1033
PsuI	RGATCY	1 cut(s)	199
PsyI	GACNNNGTC	1 cut(s)	224
PvuII	CAGCTG	1 cut(s)	736
RsaI	GTAC	6 cut(s)	176, 476, 548, 842, 1193, 1265
RsaNI	GTAC	6 cut(s)	175, 475, 547, 841, 1192, 1264
RseI	CAYNNNNRTG	3 cut(s)	194, 536, 1160
SacI	GAGCTC	2 cut(s)	126, 336
SaqAI	TTAA	2 cut(s)	675, 993
SatI	GCNGC	5 cut(s)	37, 112, 166, 906, 1332
Sau3AI	GATC	8 cut(s)	199, 230, 462, 481, 670, 830, 910, 1249
Sau96I	GGNCC	5 cut(s)	236, 258, 288, 303, 310
SchI	GAGTC	3 cut(s)	215, 634, 862
ScrFI	CCNGG	7 cut(s)	23, 210, 286, 292, 729, 1124, 1277
SduI	GDGCHC	7 cut(s)	84, 126, 210, 336, 570, 861, 968
SfaNI	GCATC	5 cut(s)	96, 147, 480, 874, 1270
SfcI	CTRYAG	1 cut(s)	389
SfiI	GGCCNNNNNGGCC	1 cut(s)	243
SfoI	GGCGCC	2 cut(s)	52, 328
Sfr274I	CTCGAG	2 cut(s)	131, 203
SfuI	TTCGAA	1 cut(s)	751
SlaI	CTCGAG	2 cut(s)	131, 203
SmiMI	CAYNNNNRTG	3 cut(s)	194, 536, 1160
SmlI	CTYRAG	4 cut(s)	131, 203, 644, 823
SmoI	CTYRAG	4 cut(s)	131, 203, 644, 823
Sse9I	AATT	2 cut(s)	376, 1151
SsiI	CCGC	6 cut(s)	27, 36, 111, 165, 168, 782
SspDI	GGCGCC	2 cut(s)	50, 326
SstI	GAGCTC	2 cut(s)	126, 336
StyD4I	CCNGG	7 cut(s)	21, 208, 284, 290, 727, 1122, 1275
StyI	CCWWGG	3 cut(s)	216, 306, 919
TaaI	ACNGT	4 cut(s)	33, 535, 845, 856
TaiI	ACGT	3 cut(s)	180, 928, 999
TaqI	TCGA	5 cut(s)	90, 132, 204, 339, 751
TaqII	GACCGA	1 cut(s)	493
TasI	AATT	2 cut(s)	376, 1151
TauI	GCSGC	3 cut(s)	39, 114, 168
TfiI	GAWTC	2 cut(s)	341, 1033
Tru1I	TTAA	2 cut(s)	675, 993
Tru9I	TTAA	2 cut(s)	675, 993
TscAI	CASTG	4 cut(s)	38, 433, 1060, 1201
TseFI	GTSAC	2 cut(s)	706, 1061
TseI	GCWGC	2 cut(s)	905, 1331
Tsp45I	GTSAC	2 cut(s)	706, 1061
TspDTI	ATGAA	3 cut(s)	606, 996, 1259
TspGWI	ACGGA	5 cut(s)	214, 334, 350, 553, 941
TspRI	CASTG	4 cut(s)	38, 433, 1060, 1201
Tth111I	GACNNNGTC	1 cut(s)	224
Van91I	CCANNNNNTGG	2 cut(s)	60, 920
VneI	GTGCAC	1 cut(s)	566
XceI	RCATGY	1 cut(s)	714
XhoI	CTCGAG	2 cut(s)	131, 203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.