Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001266

Physical Location & Seq

Genomic Coordinates Forward (+)

34702634 .. 34705754

Gene Structure 3121 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00242320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGATTATCAGCAGTAGCGTCCGGACATGTTTCCCGCGCTTTCCATCCTCGTCGTCGGAGACGCATGTTTTCCGGTCGGCAATCAAGTTTACTTTCACTCTCCGGCGGCGACTTTGCACCACTTTGTGCTCTGTTTCGGCCTCCCAGAAGAAGGAGAAGGAGAAGGTGATAGTGGTATCGGGGCCCACCGGAGCCGGGAAGAGCCGGCTGGCACTCGAGCTCGCTAAGGTGCTCAACGGCGAGATTATCAGCGCCGACTCTGTCCAGGTATATCGTGGTCTTGACGTTGGATCAGCGAAACCTTCTCCAGGTGATAGAAAGGAAGTACCACATCATCTGGTTGACATATTGCACCCATCTGAAGACTACTCCGTTGGACAATTTTATGAGGATGCAAGGCAAACTACAAGATGTATTCTTGATAATGGCCGTGTTCCCATAGTTACTGGTGGCACTGGATTGTACTTGCGATGGTTAATATATGGAAAACCAGATGTTCCTAAAGCCTCAAAAGAGATCGCATCTGAAGTGTCTTCTGAGTTGGCAGATTTAGAAAGAAATGGACACTGGGATGCAGCTGTGCAGTTGGTGATCAAAGCAGGTGACCCTAAGGCTCAATTTTTGGCTGCTAATGATTGGTACCGATTAAGACGCAGCCTGGAGATCATCAAGTCTAGTGGATCACCTCCATCTGCCTTCGAAGTACCGTATAATTCTTTCCGCAAAGAATGTGATTCTAGTGTAGTAGACACTAATGACATTAGTTCCTCTGCTGATGCTGTGGAGGAAGTTAAATCAAAGGAATTGGACTATGACTTCATTTGCTTTTTCCTCTCAAACCAAAGGGTTGATCTATACAGATCAATTGATTGGCGATGTGAAGATATGGTGTCAGGAACTGATGGTATCTTGTCTGAGGCCAGATGGCTTCTTGATGCGGGTCTTCTTCCAAATTCCAATTCAGCAACCAGAGCAATTGGTTACAGACAAGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0052381 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

331

Amino Acids

36.64

Weight (kDa)

6.55

Isoelectric Point (pI)

43.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPT	PF01745	55 - 103	3.5e-06	Isopentenyl transferase
IPPT	PF01715	89 - 331	6.4e-49	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001266)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20040 AT5G20040 AT5G20040
fragaria_vesca	FvH4_3g18660 FvH4_3g18660 FvH4_3g18660 FvH4_3g18660 FvH4_3g18660
malus_domestica	MD03G1240200.v1.1 MD11G1259500.v1.1
prunus_persica	Prupe.4G170400_v2.0.a1 Prupe.4G170400_v2.0.a1
pyrus_communis	pycom03g18540 pycom11g22930
rosa_chinensis	RchiOBHm_Chr0c28g0500971 RchiOBHm_Chr0c28g0501011 RchiOBHm_Chr0c28g0501061 RchiOBHm_Chr1g0325431 RchiOBHm_Chr3g0490501 RchiOBHm_Chr5g0031481 RchiOBHm_Chr5g0052511 RchiOBHm_Chr6g0273141 RchiOBHm_Chr7g0217341 RchiOBHm_Chr7g0243571 RchiOBHm_Chr7g0243611
rosa_laevigata	RLG00000002491 RLG00000015074 RLG00000033314
rosa_multiflora	Rmu_sc0000404.1_g000011 Rmu_ssc0000480.1_g000027
rosa_roxburghii	Rroxscaffold_1G00026620 Rroxscaffold_1G00039590 Rroxscaffold_1G00048840 Rroxscaffold_3G00242320 Rroxscaffold_3G00242330 Rroxscaffold_3G00247160
rosa_rugosa	Rorug05G0126200 Rorug07G0168200 Rorug07G0168200 Rorug07G0168300
rosa_samantha	Rh1DG073200 Rh4AG212400 Rh5CG242100 Rh5CG469300 Rh5DG224000 Rh5DG370500 Rh7BG298500 Rh7CG171500 Rh7CG326700 Rh7DG307000
rosa_wichuraiana	Rw0G010090 Rw4G018030 Rw5G019980 Rw7G026100 Rw7G036750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	590
Acc36I	ACCTGC	1 cut(s)	590
Acc65I	GGTACC	1 cut(s)	639
AccB1I	GGYRCC	1 cut(s)	639
AccI	GTMKAC	1 cut(s)	747
AccII	CGCG	1 cut(s)	37
AccIII	TCCGGA	1 cut(s)	21
AciI	CCGC	4 cut(s)	35, 106, 721, 938
AclWI	GGATC	2 cut(s)	298, 688
AcoI	YGGCCR	1 cut(s)	427
AcsI	RAATTY	1 cut(s)	952
AcuI	CTGAAG	2 cut(s)	381, 546
AdeI	CACNNNGTG	1 cut(s)	126
AfaI	GTAC	4 cut(s)	327, 464, 641, 705
AfiI	CCNNNNNNNGG	3 cut(s)	151, 195, 308
AflIII	ACRYGT	1 cut(s)	26
AjnI	CCWGG	3 cut(s)	264, 307, 657
AjuI	GAANNNNNNNTTGG	2 cut(s)	943, 975
AluBI	AGCT	2 cut(s)	220, 578
AluI	AGCT	2 cut(s)	220, 578
Alw21I	GWGCWC	3 cut(s)	131, 222, 234
Alw26I	GTCTC	1 cut(s)	53
AlwI	GGATC	2 cut(s)	298, 688
AlwNI	CAGNNNCTG	1 cut(s)	899
Ama87I	CYCGRG	1 cut(s)	215
Aor13HI	TCCGGA	1 cut(s)	21
AoxI	GGCC	4 cut(s)	138, 182, 427, 918
ApaI	GGGCCC	1 cut(s)	186
ApeKI	GCWGC	3 cut(s)	575, 626, 654
ApoI	RAATTY	1 cut(s)	952
Asp718I	GGTACC	1 cut(s)	639
AspLEI	GCGC	2 cut(s)	39, 254
AspS9I	GGNCC	2 cut(s)	182, 183
AsuC2I	CCSGG	1 cut(s)	196
AsuHPI	GGTGA	5 cut(s)	178, 323, 601, 614, 675
AsuII	TTCGAA	1 cut(s)	699
AvaI	CYCGRG	1 cut(s)	215
AxyI	CCTNAGG	1 cut(s)	609
BaeGI	GKGCMC	1 cut(s)	186
BanI	GGYRCC	1 cut(s)	639
BanII	GRGCYC	2 cut(s)	186, 222
BbsI	GAAGAC	3 cut(s)	369, 525, 935
Bbv12I	GWGCWC	3 cut(s)	131, 222, 234
BbvI	GCAGC	3 cut(s)	587, 613, 666
BccI	CCATC	6 cut(s)	52, 364, 465, 697, 896, 918
BceAI	ACGGC	2 cut(s)	253, 414
BciT130I	CCWGG	3 cut(s)	266, 309, 659
BclI	TGATCA	1 cut(s)	591
BcnI	CCSGG	1 cut(s)	196
BcoDI	GTCTC	1 cut(s)	53
BfaI	CTAG	2 cut(s)	675, 738
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	1 cut(s)	590
BisI	GCNGC	4 cut(s)	107, 576, 627, 655
BlsI	GCNGC	4 cut(s)	108, 577, 628, 656
Bme1390I	CCNGG	4 cut(s)	196, 266, 309, 659
BmeT110I	CYCGRG	1 cut(s)	215
BmgT120I	GGNCC	2 cut(s)	182, 183
BmiI	GGNNCC	4 cut(s)	183, 184, 193, 641
BmrFI	CCNGG	4 cut(s)	196, 266, 309, 659
BmrI	ACTGGG	1 cut(s)	577
BmsI	GCATC	5 cut(s)	382, 530, 562, 766, 925
BmuI	ACTGGG	1 cut(s)	577
BpiI	GAAGAC	3 cut(s)	369, 525, 935
BpmI	CTGGAG	2 cut(s)	291, 680
Bpu10I	CCTNAGC	1 cut(s)	225
Bpu14I	TTCGAA	1 cut(s)	699
BpuMI	CCSGG	1 cut(s)	196
BsaWI	WCCGGW	3 cut(s)	21, 72, 188
Bsc4I	CCNNNNNNNGG	3 cut(s)	151, 195, 308
Bse118I	RCCGGY	1 cut(s)	204
Bse1I	ACTGG	3 cut(s)	451, 460, 572
Bse21I	CCTNAGG	1 cut(s)	609
BseAI	TCCGGA	1 cut(s)	21
BseBI	CCWGG	3 cut(s)	266, 309, 659
BseGI	GGATG	3 cut(s)	44, 397, 577
BseLI	CCNNNNNNNGG	3 cut(s)	151, 195, 308
BseMII	CTCAG	2 cut(s)	528, 906
BseNI	ACTGG	3 cut(s)	451, 460, 572
BseSI	GKGCMC	1 cut(s)	186
BseXI	GCAGC	3 cut(s)	587, 613, 666
BsgI	GTGCAG	1 cut(s)	602
Bsh1236I	CGCG	1 cut(s)	37
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	4 cut(s)	140, 184, 429, 920
BshNI	GGYRCC	1 cut(s)	639
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	3 cut(s)	131, 222, 234
BsiHKCI	CYCGRG	1 cut(s)	215
BsiSI	CCGG	6 cut(s)	22, 73, 103, 189, 195, 205
BslI	CCNNNNNNNGG	3 cut(s)	151, 195, 308
BsmAI	GTCTC	1 cut(s)	53
BsmBI	CGTCTC	1 cut(s)	53
BsnI	GGCC	4 cut(s)	140, 184, 429, 920
BsoBI	CYCGRG	1 cut(s)	215
Bsp119I	TTCGAA	1 cut(s)	699
Bsp120I	GGGCCC	1 cut(s)	182
Bsp1286I	GDGCHC	4 cut(s)	131, 186, 222, 234
Bsp13I	TCCGGA	1 cut(s)	21
Bsp143I	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
BspACI	CCGC	4 cut(s)	35, 106, 721, 938
BspANI	GGCC	4 cut(s)	140, 184, 429, 920
BspCNI	CTCAG	2 cut(s)	529, 907
BspEI	TCCGGA	1 cut(s)	21
BspFNI	CGCG	1 cut(s)	37
BspLI	GGNNCC	4 cut(s)	183, 184, 193, 641
BspMI	ACCTGC	1 cut(s)	590
BspPI	GGATC	2 cut(s)	298, 688
BspQI	GCTCTTC	1 cut(s)	194
BspT104I	TTCGAA	1 cut(s)	699
BspT107I	GGYRCC	1 cut(s)	639
BsrFI	RCCGGY	1 cut(s)	204
BsrI	ACTGG	3 cut(s)	451, 460, 572
BssAI	RCCGGY	1 cut(s)	204
BssMI	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
Bst2UI	CCWGG	3 cut(s)	266, 309, 659
Bst4CI	ACNGT	1 cut(s)	708
Bst6I	CTCTTC	1 cut(s)	194
BstBI	TTCGAA	1 cut(s)	699
BstC8I	GCNNGC	3 cut(s)	206, 210, 222
BstDEI	CTNAG	4 cut(s)	225, 537, 609, 915
BstEII	GGTNACC	1 cut(s)	602
BstENI	CCTNNNNNAGG	1 cut(s)	306
BstF5I	GGATG	3 cut(s)	44, 397, 577
BstFNI	CGCG	1 cut(s)	37
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	2 cut(s)	39, 254
BstKTI	GATC	7 cut(s)	293, 519, 594, 666, 683, 853, 863
BstMAI	GTCTC	1 cut(s)	53
BstMBI	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
BstMCI	CGRYCG	1 cut(s)	77
BstMWI	GCNNNNNNNGC	1 cut(s)	971
BstNI	CCWGG	3 cut(s)	266, 309, 659
BstNSI	RCATGY	2 cut(s)	30, 68
BstPI	GGTNACC	1 cut(s)	602
BstSCI	CCNGG	4 cut(s)	194, 264, 307, 657
BstSLI	GKGCMC	1 cut(s)	186
BstUI	CGCG	1 cut(s)	37
BstV1I	GCAGC	3 cut(s)	587, 613, 666
BstV2I	GAAGAC	3 cut(s)	369, 525, 935
Bsu36I	CCTNAGG	1 cut(s)	609
BsuRI	GGCC	4 cut(s)	140, 184, 429, 920
BtgZI	GCGATG	2 cut(s)	484, 889
BtsCI	GGATG	3 cut(s)	44, 397, 577
BtsIMutI	CAGTG	2 cut(s)	453, 565
BveI	ACCTGC	1 cut(s)	590
Cac8I	GCNNGC	3 cut(s)	206, 210, 222
CaiI	CAGNNNCTG	1 cut(s)	899
CfoI	GCGC	2 cut(s)	39, 254
Cfr10I	RCCGGY	1 cut(s)	204
Cfr13I	GGNCC	2 cut(s)	182, 183
CseI	GACGC	3 cut(s)	7, 70, 660
Csp6I	GTAC	4 cut(s)	326, 463, 640, 704
CspCI	CAANNNNNGTGG	2 cut(s)	658, 693
CviAII	CATG	2 cut(s)	27, 65
CviQI	GTAC	4 cut(s)	326, 463, 640, 704
DdeI	CTNAG	4 cut(s)	225, 537, 609, 915
DpnI	GATC	7 cut(s)	292, 518, 593, 665, 682, 852, 862
DpnII	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
DraIII	CACNNNGTG	1 cut(s)	126
EaeI	YGGCCR	1 cut(s)	427
Eam1104I	CTCTTC	1 cut(s)	194
EarI	CTCTTC	1 cut(s)	194
Ecl136II	GAGCTC	1 cut(s)	220
Eco24I	GRGCYC	2 cut(s)	186, 222
Eco53kI	GAGCTC	1 cut(s)	220
Eco57I	CTGAAG	2 cut(s)	381, 546
Eco81I	CCTNAGG	1 cut(s)	609
Eco88I	CYCGRG	1 cut(s)	215
Eco91I	GGTNACC	1 cut(s)	602
EcoICRI	GAGCTC	1 cut(s)	220
EcoNI	CCTNNNNNAGG	1 cut(s)	306
EcoO109I	RGGNCCY	1 cut(s)	182
EcoO65I	GGTNACC	1 cut(s)	602
EcoRII	CCWGG	3 cut(s)	264, 307, 657
EcoT38I	GRGCYC	2 cut(s)	186, 222
Esp3I	CGTCTC	1 cut(s)	53
FaeI	CATG	2 cut(s)	30, 68
FatI	CATG	2 cut(s)	26, 64
FauI	CCCGC	2 cut(s)	42, 931
FbaI	TGATCA	1 cut(s)	591
FblI	GTMKAC	1 cut(s)	747
Fnu4HI	GCNGC	4 cut(s)	107, 576, 627, 655
FokI	GGATG	3 cut(s)	31, 404, 584
FriOI	GRGCYC	2 cut(s)	186, 222
Fsp4HI	GCNGC	4 cut(s)	107, 576, 627, 655
FspBI	CTAG	2 cut(s)	675, 738
GlaI	GCGC	2 cut(s)	38, 253
GluI	GCNGC	4 cut(s)	107, 576, 627, 655
GsuI	CTGGAG	2 cut(s)	291, 680
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	4 cut(s)	140, 184, 429, 920
HapII	CCGG	6 cut(s)	22, 73, 103, 189, 195, 205
HgaI	GACGC	3 cut(s)	7, 70, 660
HhaI	GCGC	2 cut(s)	39, 254
Hin1II	CATG	2 cut(s)	30, 68
Hin6I	GCGC	2 cut(s)	37, 252
HinP1I	GCGC	2 cut(s)	37, 252
HincII	GTYRAC	1 cut(s)	343
HindII	GTYRAC	1 cut(s)	343
HinfI	GANTC	2 cut(s)	257, 734
HpaII	CCGG	6 cut(s)	22, 73, 103, 189, 195, 205
HphI	GGTGA	5 cut(s)	178, 323, 601, 614, 675
Hpy166II	GTNNAC	3 cut(s)	90, 343, 748
Hpy188I	TCNGA	5 cut(s)	58, 361, 526, 538, 916
Hpy188III	TCNNGA	5 cut(s)	22, 281, 419, 894, 932
Hpy8I	GTNNAC	3 cut(s)	90, 343, 748
Hpy99I	CGWCG	2 cut(s)	55, 58
HpyAV	CCTTC	5 cut(s)	145, 151, 157, 312, 706
HpyCH4III	ACNGT	1 cut(s)	708
HpyCH4IV	ACGT	1 cut(s)	285
HpyCH4V	TGCA	5 cut(s)	117, 352, 395, 575, 583
HpyF10VI	GCNNNNNNNGC	1 cut(s)	971
HpyF3I	CTNAG	4 cut(s)	225, 537, 609, 915
HpySE526I	ACGT	1 cut(s)	285
Hsp92II	CATG	2 cut(s)	30, 68
HspAI	GCGC	2 cut(s)	37, 252
Kpn2I	TCCGGA	1 cut(s)	21
KpnI	GGTACC	1 cut(s)	643
KroI	GCCGGC	1 cut(s)	204
KroNI	GCCGGC	1 cut(s)	206
Ksp22I	TGATCA	1 cut(s)	591
Kzo9I	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
LguI	GCTCTTC	1 cut(s)	194
LmnI	GCTCC	1 cut(s)	191
Lsp1109I	GCAGC	3 cut(s)	587, 613, 666
LweI	GCATC	5 cut(s)	382, 530, 562, 766, 925
MaeI	CTAG	2 cut(s)	675, 738
MaeII	ACGT	1 cut(s)	285
MaeIII	GTNAC	3 cut(s)	442, 602, 980
MalI	GATC	7 cut(s)	292, 518, 593, 665, 682, 852, 862
MboI	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
MboII	GAAGA	7 cut(s)	160, 211, 374, 525, 893, 935, 938
MfeI	CAATTG	2 cut(s)	864, 975
MhlI	GDGCHC	4 cut(s)	131, 186, 222, 234
MluCI	AATT	8 cut(s)	380, 617, 712, 803, 864, 952, 958, 975
MlyI	GAGTC	1 cut(s)	251
MmeI	TCCRAC	3 cut(s)	36, 268, 355
MnlI	CCTC	9 cut(s)	58, 151, 382, 517, 696, 778, 778, 842, 910
MroI	TCCGGA	1 cut(s)	21
MroNI	GCCGGC	1 cut(s)	204
MseI	TTAA	3 cut(s)	476, 647, 792
MslI	CAYNNNNRTG	1 cut(s)	570
MspA1I	CMGCKG	1 cut(s)	578
MspI	CCGG	6 cut(s)	22, 73, 103, 189, 195, 205
MspR9I	CCNGG	4 cut(s)	196, 266, 309, 659
MunI	CAATTG	2 cut(s)	864, 975
MvaI	CCWGG	3 cut(s)	266, 309, 659
MvnI	CGCG	1 cut(s)	37
MwoI	GCNNNNNNNGC	1 cut(s)	971
NaeI	GCCGGC	1 cut(s)	206
NciI	CCSGG	1 cut(s)	196
NdeII	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
NgoMIV	GCCGGC	1 cut(s)	204
NlaIII	CATG	2 cut(s)	30, 68
NlaIV	GGNNCC	4 cut(s)	183, 184, 193, 641
NmuCI	GTSAC	1 cut(s)	602
NspI	RCATGY	2 cut(s)	30, 68
NspV	TTCGAA	1 cut(s)	699
PaeR7I	CTCGAG	1 cut(s)	215
PaqCI	CACCTGC	1 cut(s)	590
PciI	ACATGT	1 cut(s)	26
PciSI	GCTCTTC	1 cut(s)	194
PdiI	GCCGGC	1 cut(s)	206
PfeI	GAWTC	1 cut(s)	734
PflFI	GACNNNGTC	1 cut(s)	260
PkrI	GCNGC	4 cut(s)	108, 577, 628, 656
PleI	GAGTC	1 cut(s)	251
PpsI	GAGTC	1 cut(s)	251
PscI	ACATGT	1 cut(s)	26
Psp124BI	GAGCTC	1 cut(s)	222
Psp6I	CCWGG	3 cut(s)	264, 307, 657
PspEI	GGTNACC	1 cut(s)	602
PspGI	CCWGG	3 cut(s)	264, 307, 657
PspN4I	GGNNCC	4 cut(s)	183, 184, 193, 641
PspOMI	GGGCCC	1 cut(s)	182
PspPI	GGNCC	2 cut(s)	182, 183
PspXI	VCTCGAGB	1 cut(s)	215
PstNI	CAGNNNCTG	1 cut(s)	899
PsyI	GACNNNGTC	1 cut(s)	260
PvuII	CAGCTG	1 cut(s)	578
RsaI	GTAC	4 cut(s)	327, 464, 641, 705
RsaNI	GTAC	4 cut(s)	326, 463, 640, 704
RseI	CAYNNNNRTG	1 cut(s)	570
SacI	GAGCTC	1 cut(s)	222
SapI	GCTCTTC	1 cut(s)	194
SaqAI	TTAA	3 cut(s)	476, 647, 792
SatI	GCNGC	4 cut(s)	107, 576, 627, 655
Sau3AI	GATC	7 cut(s)	290, 516, 591, 663, 680, 850, 860
Sau96I	GGNCC	2 cut(s)	182, 183
SchI	GAGTC	1 cut(s)	251
ScrFI	CCNGG	4 cut(s)	196, 266, 309, 659
SduI	GDGCHC	4 cut(s)	131, 186, 222, 234
SfaNI	GCATC	5 cut(s)	382, 530, 562, 766, 925
Sfr274I	CTCGAG	1 cut(s)	215
SfuI	TTCGAA	1 cut(s)	699
SlaI	CTCGAG	1 cut(s)	215
SmiMI	CAYNNNNRTG	1 cut(s)	570
SmlI	CTYRAG	1 cut(s)	215
SmoI	CTYRAG	1 cut(s)	215
Sse9I	AATT	8 cut(s)	380, 617, 712, 803, 864, 952, 958, 975
SsiI	CCGC	4 cut(s)	35, 106, 721, 938
SspMI	CTAG	2 cut(s)	675, 738
SstI	GAGCTC	1 cut(s)	222
StyD4I	CCNGG	4 cut(s)	194, 264, 307, 657
TaaI	ACNGT	1 cut(s)	708
TaiI	ACGT	1 cut(s)	288
TaqI	TCGA	2 cut(s)	216, 699
TasI	AATT	8 cut(s)	380, 617, 712, 803, 864, 952, 958, 975
TatI	WGTACW	1 cut(s)	462
TauI	GCSGC	1 cut(s)	109
TfiI	GAWTC	1 cut(s)	734
Tru1I	TTAA	3 cut(s)	476, 647, 792
Tru9I	TTAA	3 cut(s)	476, 647, 792
TscAI	CASTG	2 cut(s)	460, 572
TseFI	GTSAC	1 cut(s)	602
TseI	GCWGC	3 cut(s)	575, 626, 654
Tsp45I	GTSAC	1 cut(s)	602
TspDTI	ATGAA	1 cut(s)	808
TspGWI	ACGGA	1 cut(s)	361
TspRI	CASTG	2 cut(s)	460, 572
Tth111I	GACNNNGTC	1 cut(s)	260
XagI	CCTNNNNNAGG	1 cut(s)	306
XapI	RAATTY	1 cut(s)	952
XceI	RCATGY	2 cut(s)	30, 68
XcmI	CCANNNNNNNNNTGG	1 cut(s)	272
XhoI	CTCGAG	1 cut(s)	215
XmiI	GTMKAC	1 cut(s)	747
XspI	CTAG	2 cut(s)	675, 738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.