Rh7CG171500

Belongs to the IPP transferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
14467280 .. 14467971
692 bp
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UTR
Exon/CDS
Intron
Rh7CG171500.1

Sequence Viewer

Length: 327 bp
ATGGTTAGACATATTAGCTTTAGCAATTTTTTTTTTGTCATTAATCAGTATGGGCATTTGGAATTGTTAAATTATGCTCATGTAAATTTTGTGTACTCATCTCACACTGGACAAGTTTTCCAGGATACTGTTCTAAACTTTATTTATGATGCATACCATGACAAAAGTGGAAATTGGGTTGTGCCTGAATCACTGCAAATGAAGAAAGAATTGTCAAGCCGCCGAGAAGTGTCTGAACTAAAGAGCAACCGAACTAAGAACAGGCATTTTATCAGACATGAAGATTGTTCAGATATTCTAGACTGGATACAGAGAACACAAGGCTGA

Protein Analysis

108

Amino Acids

12.9

Weight (kDa)

7.06

Isoelectric Point (pI)

33.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 220
AcsI RAATTY 1 cut(s) 85
AfaI GTAC 1 cut(s) 95
AjnI CCWGG 1 cut(s) 120
AluBI AGCT 1 cut(s) 18
AluI AGCT 1 cut(s) 18
ApoI RAATTY 1 cut(s) 85
AseI ATTAAT 1 cut(s) 42
BciT130I CCWGG 1 cut(s) 122
BciVI GTATCC 2 cut(s) 118, 300
BfaI CTAG 1 cut(s) 299
BfuI GTATCC 2 cut(s) 118, 300
BisI GCNGC 1 cut(s) 220
BlsI GCNGC 1 cut(s) 221
Bme1390I CCNGG 1 cut(s) 122
BmrFI CCNGG 1 cut(s) 122
BmsI GCATC 1 cut(s) 139
Bse1I ACTGG 2 cut(s) 112, 308
BseBI CCWGG 1 cut(s) 122
BseNI ACTGG 2 cut(s) 112, 308
BspACI CCGC 1 cut(s) 220
BsrI ACTGG 2 cut(s) 112, 308
Bst2UI CCWGG 1 cut(s) 122
Bst4CI ACNGT 1 cut(s) 130
BstDEI CTNAG 1 cut(s) 255
BstNI CCWGG 1 cut(s) 122
BstSCI CCNGG 1 cut(s) 120
BsuI GTATCC 2 cut(s) 118, 300
BtsI GCAGTG 1 cut(s) 191
BtsIMutI CAGTG 2 cut(s) 105, 191
Csp6I GTAC 1 cut(s) 94
CviAII CATG 3 cut(s) 80, 158, 278
CviJI RGCY 3 cut(s) 18, 219, 324
CviKI_1 RGCY 3 cut(s) 18, 219, 324
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 1 cut(s) 255
EcoRII CCWGG 1 cut(s) 120
EcoT22I ATGCAT 1 cut(s) 154
FaeI CATG 3 cut(s) 83, 161, 281
FaiI YATR 8 cut(s) 12, 51, 75, 81, 147, 154, 159, 279
FatI CATG 3 cut(s) 79, 157, 277
Fnu4HI GCNGC 1 cut(s) 220
Fsp4HI GCNGC 1 cut(s) 220
FspBI CTAG 1 cut(s) 299
GluI GCNGC 1 cut(s) 220
Hin1II CATG 3 cut(s) 83, 161, 281
HinfI GANTC 1 cut(s) 188
Hpy166II GTNNAC 1 cut(s) 94
Hpy188I TCNGA 3 cut(s) 235, 275, 292
Hpy188III TCNNGA 1 cut(s) 299
Hpy8I GTNNAC 1 cut(s) 94
HpyCH4III ACNGT 1 cut(s) 130
HpyCH4V TGCA 2 cut(s) 152, 196
HpyF3I CTNAG 1 cut(s) 255
Hsp92II CATG 3 cut(s) 83, 161, 281
LpnPI CCDG 6 cut(s) 93, 107, 134, 198, 247, 289
LweI GCATC 1 cut(s) 139
MaeI CTAG 1 cut(s) 299
MboII GAAGA 2 cut(s) 214, 293
MluCI AATT 6 cut(s) 25, 62, 70, 85, 172, 209
Mph1103I ATGCAT 1 cut(s) 154
MseI TTAA 2 cut(s) 42, 68
MspR9I CCNGG 1 cut(s) 122
MvaI CCWGG 1 cut(s) 122
NlaIII CATG 3 cut(s) 83, 161, 281
NmeAIII GCCGAG 1 cut(s) 248
NsiI ATGCAT 1 cut(s) 154
PfeI GAWTC 1 cut(s) 188
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 1 cut(s) 221
PshBI ATTAAT 1 cut(s) 42
Psp6I CCWGG 1 cut(s) 120
PspGI CCWGG 1 cut(s) 120
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
SaqAI TTAA 2 cut(s) 42, 68
SatI GCNGC 1 cut(s) 220
ScrFI CCNGG 1 cut(s) 122
SetI ASST 1 cut(s) 20
SfaNI GCATC 1 cut(s) 139
Sse9I AATT 6 cut(s) 25, 62, 70, 85, 172, 209
SsiI CCGC 1 cut(s) 220
SspMI CTAG 1 cut(s) 299
StyD4I CCNGG 1 cut(s) 120
TaaI ACNGT 1 cut(s) 130
TasI AATT 6 cut(s) 25, 62, 70, 85, 172, 209
TatI WGTACW 1 cut(s) 93
TauI GCSGC 1 cut(s) 222
TfiI GAWTC 1 cut(s) 188
Tru1I TTAA 2 cut(s) 42, 68
Tru9I TTAA 2 cut(s) 42, 68
TscAI CASTG 2 cut(s) 112, 198
TspDTI ATGAA 2 cut(s) 215, 294
TspRI CASTG 2 cut(s) 112, 198
VspI ATTAAT 1 cut(s) 42
XapI RAATTY 1 cut(s) 85
XbaI TCTAGA 1 cut(s) 298
XcmI CCANNNNNNNNNTGG 1 cut(s) 164
XspI CTAG 1 cut(s) 299
Zsp2I ATGCAT 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.