Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001266

Physical Location & Seq

Genomic Coordinates Forward (+)

25123199 .. 25128021

Gene Structure 4823 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG224000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1404 bp

ATGATTATCAGCAGTAGCGTCCGGACAGGGTTCCCACGCTTTCCATCCTCGTCGGAGAAGCGTGTCTTCCGGTTGGCAGTCAAGTTTACTTTCACTCTCCGGCGGCGACCTTTCACCACCTTGTGCTCTGTTTCGGCCACCCAGAAGAAGAAGAGCAAGGAGAAGGTGATCGTGGTATCGGGGCCCACCGGAGCCGGGAAGAGCCGGCTGGCACTCGAGCTAGCTAAGGTGCTCAACGGCGAGATTATCAGCGCCGACTCTGTCCAGGTTAAATTGACTTCATTTGATATGGCCTTTGCGGCACAGGTATATCGGGGTCTTGATGTTGGATCGGCAAAGCCTTCTCCAGGTGATAGAAAGGAAGTACCACATCATCTGGTTGACATATTGCACCCATCTGAAGACTACTCGGTTGGACAATTTTATGACGATGCAAGGCAAGCTACAAGGTGTATTCTTGACAATGGGCGTGTTCCCATAGTTACTGGTGGCACTGGATTGTACTTGCGATGGTTAATATATGGAAAACCAGATGTTCCCAAAGCCTCAAAAGAGATCGCATCTGAAGTGTCTTCTGAGTTGGCAGATTTAGAAAGAAATGGACACTGGGATGCAGCTGTGCAGTTGGTGATCAAAGCAGGTGACCCTAAGGCTCAATTTTTGGCTGCTAATGATTGGTACCGATTAAGACGCAGCCTGGAGATCATCAAGTCTAGTGGATCACCTCCATCTGCCTTCGAAGTACCGTATGATTCTTTCCGCAAAGAATGTGATTCTAGTGTAGTAGACACTAATGACATTAACTCCTCTGCTGATGTTGTGGAGGAAGTTAAATCAAAGGAATTGGACTATGACTTCATTTGCTTTTTCCTCTCAAACCAAAGGGTTGATCTATACAGATCAATTGATTGGCGATGTGAAGATATGGTGTCAGGAACTGATGGTATCTTGTCTGAGGCCAGATGGCTTCTTGATGCGGGTCTTATTCCAAATTCCAATTCAGCAACCAGAGCAATTGGTTACAGACAAGCTATGGAGTATTTATTATTGTGTAGGGAGCAAGGAGGTAGTTCTTCACCAAGAGAGTTCTACAACTTTTTGACTGAATTTCAAAAGGCATCTAGAAATTTTGCAAAACGGCAATTGACATGGTTTCGTAACGAGCAAATCTATCACTGGCTTGACGCTTCCAAACCCTTGGATACTGTTCTAAACTTTATTTGTGATGCATACCATGACAAAAGTGGAAATTGGGTTGTGCCTGAATCACTGCAAATGAAGAAAGAATTGTCAAGCCGCCGAGAAGAGTCTGAACTAAAGAGCTATCGAACTAAGAACAGGCATTTTATCAGACGTGAAGATTGTTCAGATATTCTAGACTGGATACAGAGAACACAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016765 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0052381 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

467

Amino Acids

52.94

Weight (kDa)

8.46

Isoelectric Point (pI)

44.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IPPT	PF01715	102 - 388	5.6e-60	IPP transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001266)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20040 AT5G20040 AT5G20040
fragaria_vesca	FvH4_3g18660 FvH4_3g18660 FvH4_3g18660 FvH4_3g18660 FvH4_3g18660
malus_domestica	MD03G1240200.v1.1 MD11G1259500.v1.1
prunus_persica	Prupe.4G170400_v2.0.a1 Prupe.4G170400_v2.0.a1
pyrus_communis	pycom03g18540 pycom11g22930
rosa_chinensis	RchiOBHm_Chr0c28g0500971 RchiOBHm_Chr0c28g0501011 RchiOBHm_Chr0c28g0501061 RchiOBHm_Chr1g0325431 RchiOBHm_Chr3g0490501 RchiOBHm_Chr5g0031481 RchiOBHm_Chr5g0052511 RchiOBHm_Chr6g0273141 RchiOBHm_Chr7g0217341 RchiOBHm_Chr7g0243571 RchiOBHm_Chr7g0243611
rosa_laevigata	RLG00000002491 RLG00000015074 RLG00000033314
rosa_multiflora	Rmu_sc0000404.1_g000011 Rmu_ssc0000480.1_g000027
rosa_roxburghii	Rroxscaffold_1G00026620 Rroxscaffold_1G00039590 Rroxscaffold_1G00048840 Rroxscaffold_3G00242320 Rroxscaffold_3G00242330 Rroxscaffold_3G00247160
rosa_rugosa	Rorug05G0126200 Rorug07G0168200 Rorug07G0168200 Rorug07G0168300
rosa_samantha	Rh1DG073200 Rh4AG212400 Rh5CG242100 Rh5CG469300 Rh5DG224000 Rh5DG370500 Rh7BG298500 Rh7CG171500 Rh7CG326700 Rh7DG307000
rosa_wichuraiana	Rw0G010090 Rw4G018030 Rw5G019980 Rw7G026100 Rw7G036750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	629
Acc36I	ACCTGC	1 cut(s)	629
Acc65I	GGTACC	1 cut(s)	678
AccB1I	GGYRCC	1 cut(s)	678
AccI	GTMKAC	1 cut(s)	786
AccIII	TCCGGA	1 cut(s)	21
AciI	CCGC	5 cut(s)	103, 299, 760, 977, 1297
AclWI	GGATC	2 cut(s)	337, 727
AcoI	YGGCCR	1 cut(s)	135
AcsI	RAATTY	3 cut(s)	991, 1106, 1126
AcuI	CTGAAG	2 cut(s)	420, 585
AdeI	CACNNNGTG	1 cut(s)	123
AfaI	GTAC	4 cut(s)	366, 503, 680, 744
AfiI	CCNNNNNNNGG	2 cut(s)	195, 347
AgsI	TTSAA	1 cut(s)	1112
AjiI	CACGTC	1 cut(s)	1355
AjnI	CCWGG	3 cut(s)	264, 346, 696
AjuI	GAANNNNNNNTTGG	2 cut(s)	982, 1014
AluBI	AGCT	6 cut(s)	220, 224, 443, 617, 1031, 1323
AluI	AGCT	6 cut(s)	220, 224, 443, 617, 1031, 1323
Alw21I	GWGCWC	2 cut(s)	128, 234
AlwI	GGATC	2 cut(s)	337, 727
AlwNI	CAGNNNCTG	1 cut(s)	938
Ama87I	CYCGRG	1 cut(s)	215
Aor13HI	TCCGGA	1 cut(s)	21
AoxI	GGCC	4 cut(s)	135, 182, 291, 957
ApaI	GGGCCC	1 cut(s)	186
ApeKI	GCWGC	3 cut(s)	614, 665, 693
ApoI	RAATTY	3 cut(s)	991, 1106, 1126
Asp718I	GGTACC	1 cut(s)	678
AspLEI	GCGC	1 cut(s)	254
AspS9I	GGNCC	2 cut(s)	182, 183
AsuC2I	CCSGG	1 cut(s)	196
AsuHPI	GGTGA	7 cut(s)	106, 178, 362, 640, 653, 714, 1068
AsuII	TTCGAA	1 cut(s)	738
AsuNHI	GCTAGC	1 cut(s)	220
AvaI	CYCGRG	1 cut(s)	215
AxyI	CCTNAGG	1 cut(s)	648
BaeGI	GKGCMC	1 cut(s)	186
BanI	GGYRCC	1 cut(s)	678
BanII	GRGCYC	1 cut(s)	186
BbsI	GAAGAC	3 cut(s)	58, 408, 564
Bbv12I	GWGCWC	2 cut(s)	128, 234
BbvI	GCAGC	3 cut(s)	626, 652, 705
BccI	CCATC	6 cut(s)	52, 403, 504, 736, 935, 957
BceAI	ACGGC	2 cut(s)	253, 1154
BciT130I	CCWGG	3 cut(s)	266, 348, 698
BciVI	GTATCC	2 cut(s)	1195, 1377
BclI	TGATCA	1 cut(s)	630
BcnI	CCSGG	1 cut(s)	196
BfaI	CTAG	5 cut(s)	221, 714, 777, 1122, 1376
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	1 cut(s)	629
BfuI	GTATCC	2 cut(s)	1195, 1377
BglI	GCCNNNNNGGC	1 cut(s)	299
BisI	GCNGC	6 cut(s)	104, 300, 615, 666, 694, 1297
BlsI	GCNGC	6 cut(s)	105, 301, 616, 667, 695, 1298
Bme1390I	CCNGG	4 cut(s)	196, 266, 348, 698
BmeT110I	CYCGRG	1 cut(s)	215
BmgBI	CACGTC	1 cut(s)	1355
BmgT120I	GGNCC	2 cut(s)	182, 183
BmiI	GGNNCC	5 cut(s)	32, 183, 184, 193, 680
BmrFI	CCNGG	4 cut(s)	196, 266, 348, 698
BmrI	ACTGGG	1 cut(s)	616
BmsI	GCATC	6 cut(s)	421, 569, 601, 964, 1127, 1216
BmtI	GCTAGC	1 cut(s)	224
BmuI	ACTGGG	1 cut(s)	616
BpiI	GAAGAC	3 cut(s)	58, 408, 564
BpmI	CTGGAG	2 cut(s)	330, 719
Bpu10I	CCTNAGC	1 cut(s)	225
Bpu14I	TTCGAA	1 cut(s)	738
BpuMI	CCSGG	1 cut(s)	196
BsaJI	CCNNGG	1 cut(s)	1197
BsaWI	WCCGGW	3 cut(s)	21, 69, 188
BsaXI	ACNNNNNCTCC	2 cut(s)	788, 818
Bsc4I	CCNNNNNNNGG	2 cut(s)	195, 347
Bse118I	RCCGGY	1 cut(s)	204
Bse1I	ACTGG	5 cut(s)	490, 499, 611, 1181, 1385
Bse21I	CCTNAGG	1 cut(s)	648
BseAI	TCCGGA	1 cut(s)	21
BseBI	CCWGG	3 cut(s)	266, 348, 698
BseDI	CCNNGG	1 cut(s)	1197
BseGI	GGATG	2 cut(s)	44, 616
BseLI	CCNNNNNNNGG	2 cut(s)	195, 347
BseMII	CTCAG	2 cut(s)	567, 945
BseNI	ACTGG	5 cut(s)	490, 499, 611, 1181, 1385
BseRI	GAGGAG	1 cut(s)	796
BseSI	GKGCMC	1 cut(s)	186
BseXI	GCAGC	3 cut(s)	626, 652, 705
BsgI	GTGCAG	1 cut(s)	641
BshFI	GGCC	4 cut(s)	137, 184, 293, 959
BshNI	GGYRCC	1 cut(s)	678
BsiHKAI	GWGCWC	2 cut(s)	128, 234
BsiHKCI	CYCGRG	1 cut(s)	215
BsiSI	CCGG	6 cut(s)	22, 70, 100, 189, 195, 205
BslI	CCNNNNNNNGG	2 cut(s)	195, 347
BsnI	GGCC	4 cut(s)	137, 184, 293, 959
BsoBI	CYCGRG	1 cut(s)	215
Bsp119I	TTCGAA	1 cut(s)	738
Bsp120I	GGGCCC	1 cut(s)	182
Bsp1286I	GDGCHC	3 cut(s)	128, 186, 234
Bsp13I	TCCGGA	1 cut(s)	21
Bsp143I	GATC	8 cut(s)	168, 329, 555, 630, 702, 719, 889, 899
BspACI	CCGC	5 cut(s)	103, 299, 760, 977, 1297
BspANI	GGCC	4 cut(s)	137, 184, 293, 959
BspCNI	CTCAG	2 cut(s)	568, 946
BspEI	TCCGGA	1 cut(s)	21
BspLI	GGNNCC	5 cut(s)	32, 183, 184, 193, 680
BspMI	ACCTGC	1 cut(s)	629
BspOI	GCTAGC	1 cut(s)	224
BspPI	GGATC	2 cut(s)	337, 727
BspQI	GCTCTTC	2 cut(s)	146, 194
BspT104I	TTCGAA	1 cut(s)	738
BspT107I	GGYRCC	1 cut(s)	678
BsrFI	RCCGGY	1 cut(s)	204
BsrI	ACTGG	5 cut(s)	490, 499, 611, 1181, 1385
BssAI	RCCGGY	1 cut(s)	204
BssECI	CCNNGG	1 cut(s)	1197
BssMI	GATC	8 cut(s)	168, 329, 555, 630, 702, 719, 889, 899
BssT1I	CCWWGG	1 cut(s)	1197
Bst2UI	CCWGG	3 cut(s)	266, 348, 698
Bst4CI	ACNGT	2 cut(s)	747, 1207
Bst6I	CTCTTC	3 cut(s)	146, 194, 1299
BstBI	TTCGAA	1 cut(s)	738
BstC8I	GCNNGC	4 cut(s)	206, 210, 222, 441
BstDEI	CTNAG	5 cut(s)	225, 576, 648, 954, 1332
BstEII	GGTNACC	1 cut(s)	641
BstENI	CCTNNNNNAGG	1 cut(s)	345
BstF5I	GGATG	2 cut(s)	44, 616
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	1 cut(s)	254
BstKTI	GATC	8 cut(s)	171, 332, 558, 633, 705, 722, 892, 902
BstMBI	GATC	8 cut(s)	168, 329, 555, 630, 702, 719, 889, 899
BstMWI	GCNNNNNNNGC	3 cut(s)	299, 440, 1010
BstNI	CCWGG	3 cut(s)	266, 348, 698
BstPI	GGTNACC	1 cut(s)	641
BstSCI	CCNGG	4 cut(s)	194, 264, 346, 696
BstSLI	GKGCMC	1 cut(s)	186
BstV1I	GCAGC	3 cut(s)	626, 652, 705
BstV2I	GAAGAC	3 cut(s)	58, 408, 564
BstXI	CCANNNNNNTGG	1 cut(s)	1198
Bsu36I	CCTNAGG	1 cut(s)	648
BsuI	GTATCC	2 cut(s)	1195, 1377
BsuRI	GGCC	4 cut(s)	137, 184, 293, 959
BtgZI	GCGATG	2 cut(s)	523, 928
BtrI	CACGTC	1 cut(s)	1355
BtsCI	GGATG	2 cut(s)	44, 616
BtsI	GCAGTG	1 cut(s)	1268
BtsIMutI	CAGTG	4 cut(s)	492, 604, 1174, 1268
BveI	ACCTGC	1 cut(s)	629
Cac8I	GCNNGC	4 cut(s)	206, 210, 222, 441
CaiI	CAGNNNCTG	1 cut(s)	938
CfoI	GCGC	1 cut(s)	254
Cfr10I	RCCGGY	1 cut(s)	204
Cfr13I	GGNCC	2 cut(s)	182, 183
CseI	GACGC	3 cut(s)	7, 699, 1193
Csp6I	GTAC	4 cut(s)	365, 502, 679, 743
CspCI	CAANNNNNGTGG	2 cut(s)	697, 732
CviAII	CATG	2 cut(s)	1149, 1235
CviQI	GTAC	4 cut(s)	365, 502, 679, 743
DdeI	CTNAG	5 cut(s)	225, 576, 648, 954, 1332
DpnI	GATC	8 cut(s)	170, 331, 557, 632, 704, 721, 891, 901
DpnII	GATC	8 cut(s)	168, 329, 555, 630, 702, 719, 889, 899
DraIII	CACNNNGTG	1 cut(s)	123
EaeI	YGGCCR	1 cut(s)	135
Eam1104I	CTCTTC	3 cut(s)	146, 194, 1299
EarI	CTCTTC	3 cut(s)	146, 194, 1299
Eco130I	CCWWGG	1 cut(s)	1197
Eco24I	GRGCYC	1 cut(s)	186
Eco57I	CTGAAG	2 cut(s)	420, 585
Eco81I	CCTNAGG	1 cut(s)	648
Eco88I	CYCGRG	1 cut(s)	215
Eco91I	GGTNACC	1 cut(s)	641
EcoNI	CCTNNNNNAGG	1 cut(s)	345
EcoO109I	RGGNCCY	1 cut(s)	182
EcoO65I	GGTNACC	1 cut(s)	641
EcoRII	CCWGG	3 cut(s)	264, 346, 696
EcoT14I	CCWWGG	1 cut(s)	1197
EcoT22I	ATGCAT	1 cut(s)	1231
EcoT38I	GRGCYC	1 cut(s)	186
ErhI	CCWWGG	1 cut(s)	1197
FaeI	CATG	2 cut(s)	1152, 1238
FalI	AAGNNNNNCTT	2 cut(s)	50, 82
FatI	CATG	2 cut(s)	1148, 1234
FauI	CCCGC	1 cut(s)	970
FbaI	TGATCA	1 cut(s)	630
FblI	GTMKAC	1 cut(s)	786
Fnu4HI	GCNGC	6 cut(s)	104, 300, 615, 666, 694, 1297
FokI	GGATG	2 cut(s)	31, 623
FriOI	GRGCYC	1 cut(s)	186
Fsp4HI	GCNGC	6 cut(s)	104, 300, 615, 666, 694, 1297
FspBI	CTAG	5 cut(s)	221, 714, 777, 1122, 1376
GlaI	GCGC	1 cut(s)	253
GluI	GCNGC	6 cut(s)	104, 300, 615, 666, 694, 1297
GsuI	CTGGAG	2 cut(s)	330, 719
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	4 cut(s)	137, 184, 293, 959
HapII	CCGG	6 cut(s)	22, 70, 100, 189, 195, 205
HgaI	GACGC	3 cut(s)	7, 699, 1193
HhaI	GCGC	1 cut(s)	254
Hin1II	CATG	2 cut(s)	1152, 1238
Hin6I	GCGC	1 cut(s)	252
HinP1I	GCGC	1 cut(s)	252
HincII	GTYRAC	1 cut(s)	382
HindII	GTYRAC	1 cut(s)	382
HinfI	GANTC	5 cut(s)	257, 752, 773, 1265, 1307
HpaII	CCGG	6 cut(s)	22, 70, 100, 189, 195, 205
HphI	GGTGA	7 cut(s)	106, 178, 362, 640, 653, 714, 1068
Hpy166II	GTNNAC	3 cut(s)	87, 382, 787
Hpy188I	TCNGA	8 cut(s)	55, 400, 565, 577, 955, 1312, 1352, 1369
Hpy188III	TCNNGA	7 cut(s)	22, 320, 458, 933, 971, 1122, 1376
Hpy8I	GTNNAC	3 cut(s)	87, 382, 787
Hpy99I	CGWCG	1 cut(s)	55
HpyAV	CCTTC	3 cut(s)	157, 351, 745
HpyCH4III	ACNGT	2 cut(s)	747, 1207
HpyCH4IV	ACGT	1 cut(s)	1354
HpyCH4V	TGCA	7 cut(s)	391, 434, 614, 622, 1133, 1229, 1273
HpyF10VI	GCNNNNNNNGC	3 cut(s)	299, 440, 1010
HpyF3I	CTNAG	5 cut(s)	225, 576, 648, 954, 1332
HpySE526I	ACGT	1 cut(s)	1354
Hsp92II	CATG	2 cut(s)	1152, 1238
HspAI	GCGC	1 cut(s)	252
Kpn2I	TCCGGA	1 cut(s)	21
KpnI	GGTACC	1 cut(s)	682
KroI	GCCGGC	1 cut(s)	204
KroNI	GCCGGC	1 cut(s)	206
Ksp22I	TGATCA	1 cut(s)	630
Kzo9I	GATC	8 cut(s)	168, 329, 555, 630, 702, 719, 889, 899
LguI	GCTCTTC	2 cut(s)	146, 194
LmnI	GCTCC	2 cut(s)	191, 1057
Lsp1109I	GCAGC	3 cut(s)	626, 652, 705
LweI	GCATC	6 cut(s)	421, 569, 601, 964, 1127, 1216
MaeI	CTAG	5 cut(s)	221, 714, 777, 1122, 1376
MaeII	ACGT	1 cut(s)	1354
MaeIII	GTNAC	4 cut(s)	481, 641, 1019, 1157
MalI	GATC	8 cut(s)	170, 331, 557, 632, 704, 721, 891, 901
MboI	GATC	8 cut(s)	168, 329, 555, 630, 702, 719, 889, 899
MfeI	CAATTG	3 cut(s)	903, 1014, 1142
MhlI	GDGCHC	3 cut(s)	128, 186, 234
MlyI	GAGTC	2 cut(s)	251, 1316
MmeI	TCCRAC	3 cut(s)	33, 307, 394
MnlI	CCTC	8 cut(s)	58, 556, 735, 817, 817, 881, 949, 1058
Mph1103I	ATGCAT	1 cut(s)	1231
MroI	TCCGGA	1 cut(s)	21
MroNI	GCCGGC	1 cut(s)	204
MseI	TTAA	5 cut(s)	270, 515, 686, 801, 831
MslI	CAYNNNNRTG	1 cut(s)	609
MspA1I	CMGCKG	1 cut(s)	617
MspI	CCGG	6 cut(s)	22, 70, 100, 189, 195, 205
MspR9I	CCNGG	4 cut(s)	196, 266, 348, 698
MunI	CAATTG	3 cut(s)	903, 1014, 1142
MvaI	CCWGG	3 cut(s)	266, 348, 698
MwoI	GCNNNNNNNGC	3 cut(s)	299, 440, 1010
NaeI	GCCGGC	1 cut(s)	206
NciI	CCSGG	1 cut(s)	196
NdeII	GATC	8 cut(s)	168, 329, 555, 630, 702, 719, 889, 899
NgoMIV	GCCGGC	1 cut(s)	204
NheI	GCTAGC	1 cut(s)	220
NlaIII	CATG	2 cut(s)	1152, 1238
NlaIV	GGNNCC	5 cut(s)	32, 183, 184, 193, 680
NmeAIII	GCCGAG	1 cut(s)	1325
NmuCI	GTSAC	1 cut(s)	641
NsiI	ATGCAT	1 cut(s)	1231
NspV	TTCGAA	1 cut(s)	738
PaeR7I	CTCGAG	1 cut(s)	215
PaqCI	CACCTGC	1 cut(s)	629
PciSI	GCTCTTC	2 cut(s)	146, 194
PdiI	GCCGGC	1 cut(s)	206
PfeI	GAWTC	3 cut(s)	752, 773, 1265
PflFI	GACNNNGTC	1 cut(s)	260
PkrI	GCNGC	6 cut(s)	105, 301, 616, 667, 695, 1298
PleI	GAGTC	2 cut(s)	251, 1315
PpsI	GAGTC	2 cut(s)	251, 1315
Psp6I	CCWGG	3 cut(s)	264, 346, 696
PspEI	GGTNACC	1 cut(s)	641
PspGI	CCWGG	3 cut(s)	264, 346, 696
PspN4I	GGNNCC	5 cut(s)	32, 183, 184, 193, 680
PspOMI	GGGCCC	1 cut(s)	182
PspPI	GGNCC	2 cut(s)	182, 183
PspXI	VCTCGAGB	1 cut(s)	215
PstNI	CAGNNNCTG	1 cut(s)	938
PsyI	GACNNNGTC	1 cut(s)	260
PvuII	CAGCTG	1 cut(s)	617
RsaI	GTAC	4 cut(s)	366, 503, 680, 744
RsaNI	GTAC	4 cut(s)	365, 502, 679, 743
RseI	CAYNNNNRTG	1 cut(s)	609
SapI	GCTCTTC	2 cut(s)	146, 194
SaqAI	TTAA	5 cut(s)	270, 515, 686, 801, 831
SatI	GCNGC	6 cut(s)	104, 300, 615, 666, 694, 1297
Sau3AI	GATC	8 cut(s)	168, 329, 555, 630, 702, 719, 889, 899
Sau96I	GGNCC	2 cut(s)	182, 183
SchI	GAGTC	2 cut(s)	251, 1316
ScrFI	CCNGG	4 cut(s)	196, 266, 348, 698
SduI	GDGCHC	3 cut(s)	128, 186, 234
SfaNI	GCATC	6 cut(s)	421, 569, 601, 964, 1127, 1216
Sfr274I	CTCGAG	1 cut(s)	215
SfuI	TTCGAA	1 cut(s)	738
SlaI	CTCGAG	1 cut(s)	215
SmiMI	CAYNNNNRTG	1 cut(s)	609
SmlI	CTYRAG	1 cut(s)	215
SmoI	CTYRAG	1 cut(s)	215
SsiI	CCGC	5 cut(s)	103, 299, 760, 977, 1297
SspMI	CTAG	5 cut(s)	221, 714, 777, 1122, 1376
StyD4I	CCNGG	4 cut(s)	194, 264, 346, 696
StyI	CCWWGG	1 cut(s)	1197
TaaI	ACNGT	2 cut(s)	747, 1207
TaiI	ACGT	1 cut(s)	1357
TaqI	TCGA	3 cut(s)	216, 738, 1327
TatI	WGTACW	1 cut(s)	501
TauI	GCSGC	3 cut(s)	106, 302, 1299
TfiI	GAWTC	3 cut(s)	752, 773, 1265
Tru1I	TTAA	5 cut(s)	270, 515, 686, 801, 831
Tru9I	TTAA	5 cut(s)	270, 515, 686, 801, 831
TscAI	CASTG	4 cut(s)	499, 611, 1181, 1275
TseFI	GTSAC	1 cut(s)	641
TseI	GCWGC	3 cut(s)	614, 665, 693
Tsp45I	GTSAC	1 cut(s)	641
TspDTI	ATGAA	3 cut(s)	270, 847, 1292
TspRI	CASTG	4 cut(s)	499, 611, 1181, 1275
Tth111I	GACNNNGTC	1 cut(s)	260
XagI	CCTNNNNNAGG	1 cut(s)	345
XapI	RAATTY	3 cut(s)	991, 1106, 1126
XbaI	TCTAGA	2 cut(s)	1121, 1375
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1241
XhoI	CTCGAG	1 cut(s)	215
XmiI	GTMKAC	1 cut(s)	786
XspI	CTAG	5 cut(s)	221, 714, 777, 1122, 1376
Zsp2I	ATGCAT	1 cut(s)	1231

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.