RchiOBHm_Chr7g0241271

Glycosyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
67286865 .. 67287914
1050 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21622

Sequence Viewer

Length: 432 bp
ATGTCAAGTTTCTTTTACAAACCATGCAATTATGAGCTATTTGTGAAGCAATCTCTCAATATGGAGATGGCTATTGTTATGGCAAGGGATGCTGGAATGGACTGGATTATTCATCTTGATACTGATGAGTTACTACACCCAGCTGGTGCCAAGGAGTATTCTTTGAGGCAGTTGCTGCTTGATGTGCCTGGGAATGTGGATATGGTTATTTTTTCGAACTATGAGAGCAGTGTTGAACGAGATGATATTAAGGAACCTTTTACCGAGTTTTTACTGAAGAACAGAACTATATCCAATTTGCAAGACACCCACCTTGGTCTAGCCCTTTTCCACAATCTAGACATAGACTTTGAAGTGGTTAGTCAAAAACTTCAAATATGGGCTTTTAGTTTGGCAAGAAGTAGGTGTGGGATATCCATATATGGTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000271 GO:0000902 GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006109 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009314 GO:0009416 GO:0009505 GO:0009628 GO:0009653 GO:0009663 GO:0009664 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009825 GO:0009826 GO:0009827 GO:0009831 GO:0009832 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010078 GO:0010215 GO:0010556 GO:0010675 GO:0010962 GO:0010981 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0019222 GO:0019827 GO:0022607 GO:0022622 GO:0030154 GO:0030198 GO:0030243 GO:0030244 GO:0030312 GO:0031323 GO:0031326 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0032989 GO:0033692 GO:0033993 GO:0034284 GO:0034330 GO:0034637 GO:0034645 GO:0040007 GO:0042221 GO:0042545 GO:0042546 GO:0042547 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044042 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045216 GO:0045229 GO:0048364 GO:0048507 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051273 GO:0051274 GO:0051716 GO:0060255 GO:0060560 GO:0065007 GO:0070726 GO:0071214 GO:0071478 GO:0071482 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0097305 GO:0097708 GO:0098727 GO:0098791 GO:0099402 GO:0104004 GO:1901576 GO:1901700 GO:1903338 GO:1905392 GO:2000112 GO:2001006 GO:2001009
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

16.44

Weight (kDa)

4.83

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 146
AcuI CTGAAG 1 cut(s) 296
AgsI TTSAA 3 cut(s) 236, 353, 374
AjnI CCWGG 1 cut(s) 187
AluBI AGCT 2 cut(s) 37, 143
AluI AGCT 2 cut(s) 37, 143
AlwNI CAGNNNCTG 1 cut(s) 175
ApeKI GCWGC 1 cut(s) 175
ArsI GACNNNNNNTTYG 2 cut(s) 332, 364
AsuII TTCGAA 1 cut(s) 215
BanI GGYRCC 1 cut(s) 146
BbvI GCAGC 1 cut(s) 162
BccI CCATC 1 cut(s) 61
BciT130I CCWGG 1 cut(s) 189
BfaI CTAG 2 cut(s) 320, 338
BisI GCNGC 1 cut(s) 176
BlsI GCNGC 1 cut(s) 177
Bme1390I CCNGG 1 cut(s) 189
BmiI GGNNCC 3 cut(s) 148, 255, 427
BmrFI CCNGG 1 cut(s) 189
BmsI GCATC 1 cut(s) 79
Bpu14I TTCGAA 1 cut(s) 215
BsaJI CCNNGG 3 cut(s) 150, 188, 313
Bse1I ACTGG 1 cut(s) 107
BseBI CCWGG 1 cut(s) 189
BseDI CCNNGG 3 cut(s) 150, 188, 313
BseGI GGATG 1 cut(s) 94
BseNI ACTGG 1 cut(s) 107
BseXI GCAGC 1 cut(s) 162
BseYI CCCAGC 1 cut(s) 139
BshNI GGYRCC 1 cut(s) 146
Bsp119I TTCGAA 1 cut(s) 215
BspLI GGNNCC 3 cut(s) 148, 255, 427
BspT104I TTCGAA 1 cut(s) 215
BspT107I GGYRCC 1 cut(s) 146
BsrI ACTGG 1 cut(s) 107
BssECI CCNNGG 3 cut(s) 150, 188, 313
BssT1I CCWWGG 2 cut(s) 150, 313
Bst2UI CCWGG 1 cut(s) 189
BstAPI GCANNNNNTGC 2 cut(s) 89, 175
BstBI TTCGAA 1 cut(s) 215
BstF5I GGATG 1 cut(s) 94
BstMWI GCNNNNNNNGC 3 cut(s) 89, 175, 184
BstNI CCWGG 1 cut(s) 189
BstSCI CCNGG 1 cut(s) 187
BstV1I GCAGC 1 cut(s) 162
BtsCI GGATG 1 cut(s) 94
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 1 cut(s) 235
CaiI CAGNNNCTG 1 cut(s) 175
CviAII CATG 1 cut(s) 24
CviJI RGCY 5 cut(s) 37, 71, 143, 323, 383
CviKI_1 RGCY 5 cut(s) 37, 71, 143, 323, 383
Eco130I CCWWGG 2 cut(s) 150, 313
Eco32I GATATC 1 cut(s) 414
Eco57I CTGAAG 1 cut(s) 296
EcoRII CCWGG 1 cut(s) 187
EcoRV GATATC 1 cut(s) 414
EcoT14I CCWWGG 2 cut(s) 150, 313
ErhI CCWWGG 2 cut(s) 150, 313
FaeI CATG 1 cut(s) 27
FatI CATG 1 cut(s) 23
Fnu4HI GCNGC 1 cut(s) 176
FokI GGATG 1 cut(s) 101
Fsp4HI GCNGC 1 cut(s) 176
FspBI CTAG 2 cut(s) 320, 338
GluI GCNGC 1 cut(s) 176
GsaI CCCAGC 1 cut(s) 143
Hin1II CATG 1 cut(s) 27
Hpy188III TCNNGA 3 cut(s) 116, 338, 429
HpyCH4V TGCA 2 cut(s) 27, 301
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 175, 184
Hsp92II CATG 1 cut(s) 27
LpnPI CCDG 6 cut(s) 78, 88, 129, 153, 174, 201
Lsp1109I GCAGC 1 cut(s) 162
LweI GCATC 1 cut(s) 79
MaeI CTAG 2 cut(s) 320, 338
MaeIII GTNAC 1 cut(s) 129
MboII GAAGA 1 cut(s) 289
MluCI AATT 2 cut(s) 28, 295
MnlI CCTC 1 cut(s) 159
MseI TTAA 1 cut(s) 249
MspA1I CMGCKG 1 cut(s) 143
MspR9I CCNGG 1 cut(s) 189
MvaI CCWGG 1 cut(s) 189
MwoI GCNNNNNNNGC 3 cut(s) 89, 175, 184
NlaIII CATG 1 cut(s) 27
NlaIV GGNNCC 3 cut(s) 148, 255, 427
NspV TTCGAA 1 cut(s) 215
PkrI GCNGC 1 cut(s) 177
Psp6I CCWGG 1 cut(s) 187
PspFI CCCAGC 1 cut(s) 139
PspGI CCWGG 1 cut(s) 187
PspN4I GGNNCC 3 cut(s) 148, 255, 427
PstNI CAGNNNCTG 1 cut(s) 175
PvuII CAGCTG 1 cut(s) 143
SaqAI TTAA 1 cut(s) 249
SatI GCNGC 1 cut(s) 176
ScrFI CCNGG 1 cut(s) 189
SetI ASST 5 cut(s) 39, 145, 259, 315, 407
SfaNI GCATC 1 cut(s) 79
SfuI TTCGAA 1 cut(s) 215
Sse9I AATT 2 cut(s) 28, 295
SspMI CTAG 2 cut(s) 320, 338
StyD4I CCNGG 1 cut(s) 187
StyI CCWWGG 2 cut(s) 150, 313
TaqI TCGA 1 cut(s) 215
TasI AATT 2 cut(s) 28, 295
Tru1I TTAA 1 cut(s) 249
Tru9I TTAA 1 cut(s) 249
TscAI CASTG 1 cut(s) 235
TseI GCWGC 1 cut(s) 175
TspDTI ATGAA 1 cut(s) 101
TspRI CASTG 1 cut(s) 235
XbaI TCTAGA 1 cut(s) 337
XspI CTAG 2 cut(s) 320, 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.