Rorug01G0027700

Glycosyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002304
Physical Location & Seq
Reverse (-)
4717608 .. 4720551
2944 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0027700.1

Sequence Viewer

Length: 2499 bp
ATGTATAGAAACAAAACCTCTTTCAATGTGTGTTATAACAAAACAGAAACCCGTAACACCGGGCTATGGAGTGCAGGGAGTGCAGAAAACCCCTTGGTAGCATCTCTCCCAATGCTCATCATCCAACTGCTCGCCGTCTTGTTGCTCGGTCACATTCTTGCCTACCTCCTCAAACCCTTGCGCCAACCACGCATTGTTTCTAATATTCTTGCTGGCGTTCTATTAGGTCCATCTGTCTTTGCTATCACGAGAATCGTGGGATTTTCCATACTTCCTTTCGATAGCATAATGACCTTGGAGACTCTGGCAAACTTGGGGCTCGTGTACCACATTTTCCTCATTGGGTTAGAGTTTGAATTCAGACCAGTAGTACGTGCAGGGACAAAGGCTCTCAGCATTGCCCTCGCCGGCGTGGTCTTTGCCATCCCCGCCGGGTGGGCATTGCATACCTATGTACTCTTCCGCGACTTTGAAACCGTGAAAGCCAAAAGCAATATGAAAAATGTAGCGTACGGCCCCATCTTCTGGGGCATTGTCCTCTCCAGCACCAACTTCGCTGATCTCACCCAAATTCTTGCCGACTTCAAGCTTCTCCACTCGGAGGTGGGACGACTAGCCTTATCCGGTGCCATTATCTCTGATGTGGCGTCATGGTTTCTTTTTCTTGTGGTAATGGCCATACTCGGTTATGGTAAATTGTACACGGTGTTGTTAACGTTAGGCTTCATTGCATTCAGTATTTTTTTACTTCGGCCAGCTCTCGCCTGGGTAATGCGCCACACCACTAAGGAAGACGGCTATAGTGATGTCCAAATATGCTTCATTCTGTTTGGGATTGTATTGAGTGGATTAATAACCGATGCCTGCGGGGGACACTCCATCGTCGGACCTTTCATGTTGGGAGCAATTATGCCCAGGGGGATACACTTCAAGCAAATGTTTGCAGATCGTGTTGGAAAATTTGTGGAAAGCCTGATGATGCCCCTCTTTTACTTGGTCATTGGGGCGAGATTCCATTCTTTTTGGCTACTCGGTGATCTAAATAACAATCTGCAAGCTGAATCTACCGTGCCTCAGATTGTTGGGGTGATCATCCTGGCTTTCACAGCCAAGAGTGTAGGCACTTTCATCGCTGCTCTACTCAACAAAATGACACCTCGAGATAGTTTAGTTCTGGGAATCCTTATGAACACTAAAGGCTTATTGGCACTCCTTATACTCACCTCCGCTCGTGACCTAAAGGCTTTGGACACCCAAACATATGGAGTAATGTTGGTTGCGGTCTGGGCAATGACGGTTCCTGTTGGACCCTTCCTAGCCCTCATTTGCAAGTCCACCAAGAGTTCTACACAATATAAACAGAGAAGCATACAAAGTGTAGGAGTTGAAACAGAGCTTCGAATCCTTGCATGCACCCATACTGCGAGCAACGCATCAGGCATCATAAGCCTCATTGACGCTTCCAATCCATCCAGTAAATCCCCTATTCATGTCTTTGCTGTCAAACTGGTGGAACTTACTGACCATAATGCTGCTATGCTCATCGTGCATGATGCTTGCAACAAAACTGGAGCAGATGGCAACAACGACTTGAGCTCCAATGCATTTGAGAACTATGCAAGGCAAAGAGAGAATGTCTCCGTTCAATCACTCACCGCAGTGTCTGCCTACGCCACTATGCACAAGGATATATGCAACATGGCTGACGAGAAGCACGTTAACTTCATAATCCTCCCGTTCCGTATGCCAACTACTATAGATGGAGTCCCAGATGATCGTTATGATCCTCTTCTCACGGAAATTAGTAAGAAGGTCATGGAAAATGCAAAGTGCTCTGTAGGTCTTTTGGTGGATTGTGGGCTTGTCACATTCCATAACGCTTCTTTGGAGTCCCAAAACTTCGTCATGTTTTTCATTGGAGGGCCAGATGATCGAGAGGCACTAGCGTACGCATGGAGGATGGCTAGGCATCCTAGGGTAAACTTAAAAGTTATACGGTTCACCCTCAGTAAAGAGGCATGGGAGGTGAGTTATCATCACGATGGTGATGAGGAATACAAGACAAATGAAAACATTAGGCAGCACAAACAACTAGACGACGCATGCATAGATGAGTTCAAACTTGAGTCCATGAATGAACCCTCCATAGATCTGTATGAGAAGCTGGTGAATAATTTGGAAGACATTATCAATATAGTAAGCACCATGGAAGGTCAATATCAGCTGTACATAGTGGGAAGAGGTCATGATGGTTGCTCCCCAATAACAGCACCGTTGTTCGAATGCAACAAGACCAATAAACTCGGAACTTGGGGGGAAACATTGGCATCTTCAAGCGTCATGGGAAGTACATCCCTTCTTATAATACAGCAGGGTGCCTCTGTGGATGAACTAGATGAGAAAATGGGATCTGACGGGAAACATTTTGGGGATACAACTCGGCAACCTCCCGTAAAAGACGCCGAAGATTCCTTGCTTAGAACTTCATCAGTAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000271 GO:0000902 GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006109 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009314 GO:0009416 GO:0009505 GO:0009628 GO:0009653 GO:0009663 GO:0009664 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009825 GO:0009826 GO:0009827 GO:0009831 GO:0009832 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010078 GO:0010215 GO:0010556 GO:0010675 GO:0010962 GO:0010981 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0019222 GO:0019827 GO:0022607 GO:0022622 GO:0030154 GO:0030198 GO:0030243 GO:0030244 GO:0030312 GO:0031323 GO:0031326 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0032989 GO:0033692 GO:0033993 GO:0034284 GO:0034330 GO:0034637 GO:0034645 GO:0040007 GO:0042221 GO:0042545 GO:0042546 GO:0042547 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044042 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045216 GO:0045229 GO:0048364 GO:0048507 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051273 GO:0051274 GO:0051716 GO:0060255 GO:0060560 GO:0065007 GO:0070726 GO:0071214 GO:0071478 GO:0071482 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0097305 GO:0097708 GO:0098727 GO:0098791 GO:0099402 GO:0104004 GO:1901576 GO:1901700 GO:1903338 GO:1905392 GO:2000112 GO:2001006 GO:2001009
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

832

Amino Acids

91.51

Weight (kDa)

6.25

Isoelectric Point (pI)

33.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 50 - 438 6.9e-50 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 498 - 623 2.2e-10 Plant cation/H(+) antiporter domain
CHX17_C PF23259 636 - 791 9.9e-10 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 36, 2363
AccB1I GGYRCC 2 cut(s) 626, 2375
AccB7I CCANNNNNTGG 1 cut(s) 525
AccBSI CCGCTC 1 cut(s) 1229
AccII CGCG 1 cut(s) 465
AciI CCGC 6 cut(s) 429, 463, 867, 1227, 1280, 1656
AclI AACGTT 1 cut(s) 716
AclWI GGATC 2 cut(s) 1778, 2416
AcoI YGGCCR 2 cut(s) 675, 752
AcsI RAATTY 3 cut(s) 356, 570, 959
AcyI GRCGYC 2 cut(s) 647, 2460
AfaI GTAC 8 cut(s) 326, 372, 456, 512, 701, 1949, 2228, 2350
AfiI CCNNNNNNNGG 4 cut(s) 66, 435, 525, 601
AgsI TTSAA 9 cut(s) 25, 356, 473, 586, 931, 1388, 1646, 2119, 2334
AjnI CCWGG 3 cut(s) 764, 914, 1095
AleI CACNNNNGTG 2 cut(s) 1658, 2043
AluBI AGCT 7 cut(s) 589, 758, 1058, 1396, 1596, 2164, 2224
AluI AGCT 7 cut(s) 589, 758, 1058, 1396, 1596, 2164, 2224
Alw21I GWGCWC 2 cut(s) 1598, 1835
Alw26I GTCTC 2 cut(s) 293, 1642
AlwI GGATC 2 cut(s) 1778, 2416
AlwNI CAGNNNCTG 1 cut(s) 1664
Ama87I CYCGRG 1 cut(s) 1158
AoxI GGCC 4 cut(s) 514, 675, 752, 1922
ApeKI GCWGC 3 cut(s) 1133, 1532, 2080
ApoI RAATTY 3 cut(s) 356, 570, 959
AseI ATTAAT 1 cut(s) 851
AspA2I CCTAGG 1 cut(s) 1973
AspLEI GCGC 2 cut(s) 183, 777
AspS9I GGNCC 5 cut(s) 227, 515, 887, 1307, 1922
AsuC2I CCSGG 2 cut(s) 61, 433
AsuHPI GGTGA 9 cut(s) 556, 1046, 1099, 1213, 1645, 1993, 2038, 2057, 2179
AsuII TTCGAA 2 cut(s) 1399, 2280
AvaI CYCGRG 1 cut(s) 1158
AvaII GGWCC 3 cut(s) 227, 887, 1307
AvrII CCTAGG 1 cut(s) 1973
BalI TGGCCA 1 cut(s) 677
BanI GGYRCC 2 cut(s) 626, 2375
BanII GRGCYC 2 cut(s) 321, 1598
BauI CACGAG 3 cut(s) 247, 320, 1230
BbsI GAAGAC 2 cut(s) 798, 2187
Bbv12I GWGCWC 2 cut(s) 1598, 1835
BbvI GCAGC 3 cut(s) 1120, 1519, 2092
BceAI ACGGC 3 cut(s) 119, 529, 811
BcgI CGANNNNNNTGC 6 cut(s) 385, 419, 535, 569, 1111, 1145
BciT130I CCWGG 3 cut(s) 766, 916, 1097
BciVI GTATCC 2 cut(s) 915, 2425
BclI TGATCA 1 cut(s) 1089
BcnI CCSGG 2 cut(s) 61, 433
BcoDI GTCTC 2 cut(s) 293, 1642
BfaI CTAG 7 cut(s) 614, 1316, 1943, 1965, 1974, 2093, 2393
BfmI CTRYAG 3 cut(s) 799, 1755, 1836
BfuI GTATCC 2 cut(s) 915, 2425
BglI GCCNNNNNGGC 1 cut(s) 437
BglII AGATCT 1 cut(s) 2149
BisI GCNGC 3 cut(s) 1134, 1533, 2081
BlnI CCTAGG 1 cut(s) 1973
BlsI GCNGC 3 cut(s) 1135, 1534, 2082
Bme1390I CCNGG 5 cut(s) 61, 433, 766, 916, 1097
Bme18I GGWCC 3 cut(s) 227, 887, 1307
BmeT110I CYCGRG 1 cut(s) 1158
BmgT120I GGNCC 5 cut(s) 227, 515, 887, 1307, 1922
BmiI GGNNCC 5 cut(s) 517, 628, 1299, 1309, 2377
BmrFI CCNGG 5 cut(s) 61, 433, 766, 916, 1097
BmsI GCATC 8 cut(s) 110, 850, 969, 1442, 1449, 1543, 1978, 2336
BpiI GAAGAC 2 cut(s) 798, 2187
BplI GAGNNNNNCTC 2 cut(s) 1622, 1654
BpmI CTGGAG 2 cut(s) 526, 1590
Bpu14I TTCGAA 2 cut(s) 1399, 2280
BpuEI CTTGAG 2 cut(s) 1612, 2144
BpuMI CCSGG 2 cut(s) 61, 433
BsaAI YACGTR 1 cut(s) 374
BsaHI GRCGYC 2 cut(s) 647, 2460
BsaJI CCNNGG 7 cut(s) 93, 294, 765, 914, 915, 1973, 2205
BsaWI WCCGGW 1 cut(s) 623
BsaXI ACNNNNNCTCC 2 cut(s) 1580, 1610
Bsc4I CCNNNNNNNGG 4 cut(s) 66, 435, 525, 601
Bse118I RCCGGY 1 cut(s) 407
Bse1I ACTGG 4 cut(s) 365, 1473, 1512, 1573
Bse3DI GCAATG 4 cut(s) 396, 440, 726, 1296
BseBI CCWGG 3 cut(s) 766, 916, 1097
BseDI CCNNGG 7 cut(s) 93, 294, 765, 914, 915, 1973, 2205
BseGI GGATG 8 cut(s) 120, 423, 1092, 1469, 1965, 1969, 2351, 2392
BseLI CCNNNNNNNGG 4 cut(s) 66, 435, 525, 601
BseMI GCAATG 4 cut(s) 396, 440, 726, 1296
BseMII CTCAG 3 cut(s) 406, 1088, 2020
BseNI ACTGG 4 cut(s) 365, 1473, 1512, 1573
BseRI GAGGAG 1 cut(s) 158
BseXI GCAGC 3 cut(s) 1120, 1519, 2092
BsgI GTGCAG 3 cut(s) 93, 102, 396
Bsh1236I CGCG 1 cut(s) 465
BshFI GGCC 4 cut(s) 516, 677, 754, 1924
BshNI GGYRCC 2 cut(s) 626, 2375
BsiHKAI GWGCWC 2 cut(s) 1598, 1835
BsiHKCI CYCGRG 1 cut(s) 1158
BsiSI CCGG 4 cut(s) 60, 408, 432, 624
BsiWI CGTACG 2 cut(s) 510, 1947
BslFI GGGAC 5 cut(s) 394, 621, 885, 1751, 1876
BslI CCNNNNNNNGG 4 cut(s) 66, 435, 525, 601
BsmAI GTCTC 2 cut(s) 293, 1642
BsmFI GGGAC 5 cut(s) 394, 621, 885, 1751, 1876
BsmI GAATGC 2 cut(s) 731, 2288
BsnI GGCC 4 cut(s) 516, 677, 754, 1924
BsoBI CYCGRG 1 cut(s) 1158
Bsp119I TTCGAA 2 cut(s) 1399, 2280
Bsp1286I GDGCHC 3 cut(s) 321, 1598, 1835
Bsp1407I TGTACA 2 cut(s) 699, 2226
Bsp143I GATC 9 cut(s) 559, 946, 1036, 1089, 1774, 1783, 1930, 2149, 2408
Bsp19I CCATGG 1 cut(s) 2205
BspACI CCGC 6 cut(s) 429, 463, 867, 1227, 1280, 1656
BspANI GGCC 4 cut(s) 516, 677, 754, 1924
BspCNI CTCAG 3 cut(s) 405, 1087, 2019
BspFNI CGCG 1 cut(s) 465
BspHI TCATGA 1 cut(s) 2245
BspLI GGNNCC 5 cut(s) 517, 628, 1299, 1309, 2377
BspPI GGATC 2 cut(s) 1778, 2416
BspT104I TTCGAA 2 cut(s) 1399, 2280
BspT107I GGYRCC 2 cut(s) 626, 2375
BsrBI CCGCTC 1 cut(s) 1229
BsrDI GCAATG 4 cut(s) 396, 440, 726, 1296
BsrFI RCCGGY 1 cut(s) 407
BsrGI TGTACA 2 cut(s) 699, 2226
BsrI ACTGG 4 cut(s) 365, 1473, 1512, 1573
BssAI RCCGGY 1 cut(s) 407
BssECI CCNNGG 7 cut(s) 93, 294, 765, 914, 915, 1973, 2205
BssMI GATC 9 cut(s) 559, 946, 1036, 1089, 1774, 1783, 1930, 2149, 2408
BssNI GRCGYC 2 cut(s) 647, 2460
BssSI CACGAG 3 cut(s) 247, 320, 1230
BssT1I CCWWGG 4 cut(s) 93, 294, 1973, 2205
Bst2BI CACGAG 3 cut(s) 247, 320, 1230
Bst2UI CCWGG 3 cut(s) 766, 916, 1097
Bst4CI ACNGT 6 cut(s) 478, 706, 1069, 1297, 1998, 2274
Bst6I CTCTTC 3 cut(s) 464, 1794, 2233
BstACI GRCGYC 2 cut(s) 647, 2460
BstAPI GCANNNNNTGC 2 cut(s) 80, 1664
BstAUI TGTACA 2 cut(s) 699, 2226
BstBAI YACGTR 1 cut(s) 374
BstBI TTCGAA 2 cut(s) 1399, 2280
BstDEI CTNAG 5 cut(s) 392, 786, 1074, 2006, 2477
BstDSI CCRYGG 1 cut(s) 2205
BstF5I GGATG 8 cut(s) 120, 423, 1092, 1469, 1965, 1969, 2351, 2392
BstFNI CGCG 1 cut(s) 465
BstHHI GCGC 2 cut(s) 183, 777
BstKTI GATC 9 cut(s) 562, 949, 1039, 1092, 1777, 1786, 1933, 2152, 2411
BstMAI GTCTC 2 cut(s) 293, 1642
BstMBI GATC 9 cut(s) 559, 946, 1036, 1089, 1774, 1783, 1930, 2149, 2408
BstNI CCWGG 3 cut(s) 766, 916, 1097
BstNSI RCATGY 2 cut(s) 1413, 2106
BstSCI CCNGG 5 cut(s) 59, 431, 764, 914, 1095
BstSFI CTRYAG 3 cut(s) 799, 1755, 1836
BstUI CGCG 1 cut(s) 465
BstV1I GCAGC 3 cut(s) 1120, 1519, 2092
BstV2I GAAGAC 2 cut(s) 798, 2187
BstX2I RGATCY 2 cut(s) 2149, 2408
BstXI CCANNNNNNTGG 1 cut(s) 1262
BstYI RGATCY 2 cut(s) 2149, 2408
BsuI GTATCC 2 cut(s) 915, 2425
BsuRI GGCC 4 cut(s) 516, 677, 754, 1924
BtgI CCRYGG 1 cut(s) 2205
BtgZI GCGATG 1 cut(s) 1114
BtsCI GGATG 8 cut(s) 120, 423, 1092, 1469, 1965, 1969, 2351, 2392
BtsI GCAGTG 1 cut(s) 1665
BtsIMutI CAGTG 1 cut(s) 1665
CaiI CAGNNNCTG 1 cut(s) 1664
CciI TCATGA 1 cut(s) 2245
CfoI GCGC 2 cut(s) 183, 777
Cfr10I RCCGGY 1 cut(s) 407
Cfr13I GGNCC 5 cut(s) 227, 515, 887, 1307, 1922
CseI GACGC 5 cut(s) 636, 1466, 2108, 2326, 2468
Csp6I GTAC 8 cut(s) 325, 371, 455, 511, 700, 1948, 2227, 2349
CviQI GTAC 8 cut(s) 325, 371, 455, 511, 700, 1948, 2227, 2349
DdeI CTNAG 5 cut(s) 392, 786, 1074, 2006, 2477
DpnI GATC 9 cut(s) 561, 948, 1038, 1091, 1776, 1785, 1932, 2151, 2410
DpnII GATC 9 cut(s) 559, 946, 1036, 1089, 1774, 1783, 1930, 2149, 2408
EaeI YGGCCR 2 cut(s) 675, 752
Eam1104I CTCTTC 3 cut(s) 464, 1794, 2233
EarI CTCTTC 3 cut(s) 464, 1794, 2233
Ecl136II GAGCTC 1 cut(s) 1596
Eco130I CCWWGG 4 cut(s) 93, 294, 1973, 2205
Eco24I GRGCYC 2 cut(s) 321, 1598
Eco47I GGWCC 3 cut(s) 227, 887, 1307
Eco53kI GAGCTC 1 cut(s) 1596
Eco88I CYCGRG 1 cut(s) 1158
EcoICRI GAGCTC 1 cut(s) 1596
EcoRI GAATTC 1 cut(s) 356
EcoRII CCWGG 3 cut(s) 764, 914, 1095
EcoT14I CCWWGG 4 cut(s) 93, 294, 1973, 2205
EcoT22I ATGCAT 2 cut(s) 1606, 2108
EcoT38I GRGCYC 2 cut(s) 321, 1598
ErhI CCWWGG 4 cut(s) 93, 294, 1973, 2205
FaqI GGGAC 5 cut(s) 394, 621, 885, 1751, 1876
FauI CCCGC 2 cut(s) 436, 860
FauNDI CATATG 1 cut(s) 1261
FbaI TGATCA 1 cut(s) 1089
Fnu4HI GCNGC 3 cut(s) 1134, 1533, 2081
FokI GGATG 8 cut(s) 107, 410, 1079, 1456, 1956, 1972, 2338, 2399
FriOI GRGCYC 2 cut(s) 321, 1598
Fsp4HI GCNGC 3 cut(s) 1134, 1533, 2081
FspBI CTAG 7 cut(s) 614, 1316, 1943, 1965, 1974, 2093, 2393
GlaI GCGC 2 cut(s) 182, 776
GluI GCNGC 3 cut(s) 1134, 1533, 2081
GsuI CTGGAG 2 cut(s) 526, 1590
HaeIII GGCC 4 cut(s) 516, 677, 754, 1924
HapII CCGG 4 cut(s) 60, 408, 432, 624
HgaI GACGC 5 cut(s) 636, 1466, 2108, 2326, 2468
HhaI GCGC 2 cut(s) 183, 777
Hin1I GRCGYC 2 cut(s) 647, 2460
Hin6I GCGC 2 cut(s) 181, 775
HinP1I GCGC 2 cut(s) 181, 775
HincII GTYRAC 2 cut(s) 714, 1720
HindII GTYRAC 2 cut(s) 714, 1720
HindIII AAGCTT 1 cut(s) 587
HpaI GTTAAC 2 cut(s) 714, 1720
HpaII CCGG 4 cut(s) 60, 408, 432, 624
HphI GGTGA 9 cut(s) 556, 1046, 1099, 1213, 1645, 1993, 2038, 2057, 2179
Hpy166II GTNNAC 7 cut(s) 325, 702, 714, 1335, 1720, 1981, 2001
Hpy188I TCNGA 7 cut(s) 362, 601, 640, 887, 1077, 2306, 2413
Hpy188III TCNNGA 6 cut(s) 247, 1160, 1232, 1934, 2039, 2246
Hpy8I GTNNAC 7 cut(s) 325, 702, 714, 1335, 1720, 1981, 2001
Hpy99I CGWCG 2 cut(s) 887, 2102
HpyAV CCTTC 4 cut(s) 1321, 1804, 2204, 2366
HpyCH4III ACNGT 6 cut(s) 478, 706, 1069, 1297, 1998, 2274
HpyCH4IV ACGT 3 cut(s) 373, 716, 1716
HpyF3I CTNAG 5 cut(s) 392, 786, 1074, 2006, 2477
HpySE526I ACGT 3 cut(s) 373, 716, 1716
Hsp92I GRCGYC 2 cut(s) 647, 2460
HspAI GCGC 2 cut(s) 181, 775
KroI GCCGGC 1 cut(s) 407
KroNI GCCGGC 1 cut(s) 409
Ksp22I TGATCA 1 cut(s) 1089
KspAI GTTAAC 2 cut(s) 714, 1720
Kzo9I GATC 9 cut(s) 559, 946, 1036, 1089, 1774, 1783, 1930, 2149, 2408
LmnI GCTCC 4 cut(s) 902, 1571, 1601, 2261
Lsp1109I GCAGC 3 cut(s) 1120, 1519, 2092
LweI GCATC 8 cut(s) 110, 850, 969, 1442, 1449, 1543, 1978, 2336
MaeI CTAG 7 cut(s) 614, 1316, 1943, 1965, 1974, 2093, 2393
MaeII ACGT 3 cut(s) 373, 716, 1716
MaeIII GTNAC 4 cut(s) 53, 149, 1232, 1864
MalI GATC 9 cut(s) 561, 948, 1038, 1091, 1776, 1785, 1932, 2151, 2410
MbiI CCGCTC 1 cut(s) 1229
MboI GATC 9 cut(s) 559, 946, 1036, 1089, 1774, 1783, 1930, 2149, 2408
MboII GAAGA 8 cut(s) 451, 514, 803, 1781, 2192, 2250, 2322, 2477
MflI RGATCY 2 cut(s) 2149, 2408
MhlI GDGCHC 3 cut(s) 321, 1598, 1835
MlsI TGGCCA 1 cut(s) 677
MluCI AATT 8 cut(s) 356, 570, 695, 906, 959, 1800, 2173, 2494
MluNI TGGCCA 1 cut(s) 677
MlyI GAGTC 4 cut(s) 295, 1773, 1898, 2135
MmeI TCCRAC 4 cut(s) 148, 865, 934, 1285
Mox20I TGGCCA 1 cut(s) 677
Mph1103I ATGCAT 2 cut(s) 1606, 2108
MreI CGCCGGCG 1 cut(s) 407
MroNI GCCGGC 1 cut(s) 407
MscI TGGCCA 1 cut(s) 677
MseI TTAA 4 cut(s) 713, 851, 1719, 1985
MslI CAYNNNNRTG 4 cut(s) 450, 1658, 2040, 2043
Msp20I TGGCCA 1 cut(s) 677
MspA1I CMGCKG 1 cut(s) 2224
MspI CCGG 4 cut(s) 60, 408, 432, 624
MspR9I CCNGG 5 cut(s) 61, 433, 766, 916, 1097
Mva1269I GAATGC 2 cut(s) 731, 2288
MvaI CCWGG 3 cut(s) 766, 916, 1097
MvnI CGCG 1 cut(s) 465
NaeI GCCGGC 1 cut(s) 409
NciI CCSGG 2 cut(s) 61, 433
NcoI CCATGG 1 cut(s) 2205
NdeI CATATG 1 cut(s) 1261
NdeII GATC 9 cut(s) 559, 946, 1036, 1089, 1774, 1783, 1930, 2149, 2408
NgoMIV GCCGGC 1 cut(s) 407
NlaIV GGNNCC 5 cut(s) 517, 628, 1299, 1309, 2377
NmeAIII GCCGAG 1 cut(s) 2419
NmuCI GTSAC 3 cut(s) 149, 1232, 1864
NsiI ATGCAT 2 cut(s) 1606, 2108
NspI RCATGY 2 cut(s) 1413, 2106
NspV TTCGAA 2 cut(s) 1399, 2280
OliI CACNNNNGTG 2 cut(s) 1658, 2043
PaeI GCATGC 2 cut(s) 1413, 2106
PaeR7I CTCGAG 1 cut(s) 1158
PagI TCATGA 1 cut(s) 2245
PasI CCCWGGG 1 cut(s) 915
PcsI WCGNNNNNNNCGW 1 cut(s) 1713
PctI GAATGC 2 cut(s) 731, 2288
PdiI GCCGGC 1 cut(s) 409
PfeI GAWTC 6 cut(s) 252, 1011, 1061, 1179, 1401, 2468
Pfl23II CGTACG 2 cut(s) 510, 1947
PflMI CCANNNNNTGG 1 cut(s) 525
PkrI GCNGC 3 cut(s) 1135, 1534, 2082
PleI GAGTC 4 cut(s) 295, 1772, 1897, 2134
PpsI GAGTC 4 cut(s) 295, 1772, 1897, 2134
Ppu21I YACGTR 1 cut(s) 374
PshBI ATTAAT 1 cut(s) 851
PsiI TTATAA 2 cut(s) 36, 2363
Psp124BI GAGCTC 1 cut(s) 1598
Psp1406I AACGTT 1 cut(s) 716
Psp6I CCWGG 3 cut(s) 764, 914, 1095
PspGI CCWGG 3 cut(s) 764, 914, 1095
PspLI CGTACG 2 cut(s) 510, 1947
PspN4I GGNNCC 5 cut(s) 517, 628, 1299, 1309, 2377
PspPI GGNCC 5 cut(s) 227, 515, 887, 1307, 1922
PstNI CAGNNNCTG 1 cut(s) 1664
PsuI RGATCY 2 cut(s) 2149, 2408
PvuII CAGCTG 1 cut(s) 2224
RsaI GTAC 8 cut(s) 326, 372, 456, 512, 701, 1949, 2228, 2350
RsaNI GTAC 8 cut(s) 325, 371, 455, 511, 700, 1948, 2227, 2349
RseI CAYNNNNRTG 4 cut(s) 450, 1658, 2040, 2043
SacI GAGCTC 1 cut(s) 1598
SaqAI TTAA 4 cut(s) 713, 851, 1719, 1985
SatI GCNGC 3 cut(s) 1134, 1533, 2081
Sau3AI GATC 9 cut(s) 559, 946, 1036, 1089, 1774, 1783, 1930, 2149, 2408
Sau96I GGNCC 5 cut(s) 227, 515, 887, 1307, 1922
SchI GAGTC 4 cut(s) 295, 1773, 1898, 2135
ScrFI CCNGG 5 cut(s) 61, 433, 766, 916, 1097
SduI GDGCHC 3 cut(s) 321, 1598, 1835
SfaNI GCATC 8 cut(s) 110, 850, 969, 1442, 1449, 1543, 1978, 2336
SfcI CTRYAG 3 cut(s) 799, 1755, 1836
Sfr274I CTCGAG 1 cut(s) 1158
SfuI TTCGAA 2 cut(s) 1399, 2280
SgrAI CRCCGGYG 1 cut(s) 407
SinI GGWCC 3 cut(s) 227, 887, 1307
SlaI CTCGAG 1 cut(s) 1158
SmiMI CAYNNNNRTG 4 cut(s) 450, 1658, 2040, 2043
SmlI CTYRAG 3 cut(s) 1158, 1591, 2123
SmoI CTYRAG 3 cut(s) 1158, 1591, 2123
SphI GCATGC 2 cut(s) 1413, 2106
Sse9I AATT 8 cut(s) 356, 570, 695, 906, 959, 1800, 2173, 2494
SsiI CCGC 6 cut(s) 429, 463, 867, 1227, 1280, 1656
SspI AATATT 1 cut(s) 205
SspMI CTAG 7 cut(s) 614, 1316, 1943, 1965, 1974, 2093, 2393
SstI GAGCTC 1 cut(s) 1598
StyD4I CCNGG 5 cut(s) 59, 431, 764, 914, 1095
StyI CCWWGG 4 cut(s) 93, 294, 1973, 2205
TaaI ACNGT 6 cut(s) 478, 706, 1069, 1297, 1998, 2274
TaiI ACGT 3 cut(s) 376, 719, 1719
TaqI TCGA 5 cut(s) 279, 1159, 1399, 1933, 2280
TaqII GACCGA 1 cut(s) 137
TasI AATT 8 cut(s) 356, 570, 695, 906, 959, 1800, 2173, 2494
TatI WGTACW 4 cut(s) 454, 699, 2226, 2348
TfiI GAWTC 6 cut(s) 252, 1011, 1061, 1179, 1401, 2468
Tru1I TTAA 4 cut(s) 713, 851, 1719, 1985
Tru9I TTAA 4 cut(s) 713, 851, 1719, 1985
TscAI CASTG 1 cut(s) 1665
TseFI GTSAC 3 cut(s) 149, 1232, 1864
TseI GCWGC 3 cut(s) 1133, 1532, 2080
Tsp45I GTSAC 3 cut(s) 149, 1232, 1864
TspGWI ACGGA 3 cut(s) 1630, 1730, 1811
TspRI CASTG 1 cut(s) 1665
Van91I CCANNNNNTGG 1 cut(s) 525
VpaK11BI GGWCC 3 cut(s) 227, 887, 1307
VspI ATTAAT 1 cut(s) 851
XapI RAATTY 3 cut(s) 356, 570, 959
XceI RCATGY 2 cut(s) 1413, 2106
XcmI CCANNNNNNNNNTGG 1 cut(s) 762
XhoI CTCGAG 1 cut(s) 1158
XmaJI CCTAGG 1 cut(s) 1973
XspI CTAG 7 cut(s) 614, 1316, 1943, 1965, 1974, 2093, 2393
Zsp2I ATGCAT 2 cut(s) 1606, 2108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.