Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0002304

Physical Location & Seq

Genomic Coordinates Reverse (-)

5779603 .. 5786093

Gene Structure 6491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G003180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGACCAACCCCTACCACCTCCACGCGCCGCTGCGCTCCGCCCCTCAATCCTCCTCTCAAACCTTCACGGCGAAGCTCCTCCTCCTCCTCACTCTCCTCCCTCTCTCCCTCGCCGCCTTGGCTTTCATCCTCCAATGGCGCGGCGGCATCCCCGACCCCACCACGCGCTGGTCCCCTCCTGGATCCAACCACCTCTTCCCCGGCATGGAGGCCTCTCCTCTCTCCTCCGCCGTCGTCCGATCCTCCTCCTCCTCTGATTGCGTCAATCTCGGCCGCAGCAACTCGCCGTCGTTTCCTTACTATCAGAATTGGAAGTTTGATTCCGCCGCCGATTTGAAACCTAAGATAGTAATTACTACAAGTACGTCGGCAGGCTTAGATCAGATTTTACCATGGATGTTTTATCACAAGGTTATTGGAGTTTCCACCTTTTTTCTTTTTGTGGAAGGAAAGGCTGCGTCTCCTGAAGTATCCAAAGTTCTGGAGTCTATACCTGGAGTAAAATTGATATACAGAACAAAGGAGCTCGAGGAGCAACAAGCTAGAAGTCGGATTTGGAATGAGACATGGCTGTCAAGTTTCTTTTACAAACCATGCAATTATGAGCTATTTGTGAAGCAATCTCTCAATATGGAGATGGCTATTGTTATGGCAAGGGATGCTGGAATGGACTGGATTATTCATCTTGATACTGATGAGTTACTACACCCAGCTGGTGCCAAGGAGTATTCTTTGAGGCAGTTGCTGCTTGATGTGCCTGGGAATGTGGATATGGTTATTTTTTCGAACTATGAGAGCAGTGTTGAACGAGATGATATTAAGGAACCTTTTACCGAGGTATCCATGTTCAAGAAGAATTACGATCATGTACCGAAAGATACATACTTTGGAATGTACAAAGAATCAACTCGTGGCAACCCAAACTACTTTCTGACTTATGGAAATGGGAAATCAGCTGCTCGAATCCAAGATCATCTCCGTCCTAATGGCGCACACAGATGGCACAATTATATGAAAACCCCAAATGAGGTCAAATTGGAAGAGGCTGCTGTTCTACACTACACATATGCCAAATTTTCAGACTTAACATCACGACGTGATCGGTGTGGCTGCAAGCCTACAAGGGAAGATGTCAAAAGATGCTTCATGTTGGAATTTGATAGAGCTGCATTCATAATTGCTTCAACTGCAACTGAGGAGGAAATGCTCAAATGGTACCATGAACACATTGTATGGGATGACAAAGATATAAGAATAAAACTTTTGAGGAAAGGCATCTTGACTCGAATATATGCTCCAATGGCCATAATCCAAGGACTAAAGGAGTCGGGAGTCTTCAGCTCTGTTATTGCATCTGCCTCAACTACACTCTCAAAAGAAAAGTTCTTGGCAACAATTGATAGTAGTAACACCTCTAGAGCTACTGCCTCTATATCCCACCCGTCGAGGAAGATTAGTAGAAGCAGTGAGAGTATGGCTACTGCCAGGAAGACCTTGGATGTTGAAGTTGCTGAATTCCAAGAACTGGCCGTTCCACCATTATCCCCTCCAGCAATGGATGATAACCAGCTCAGCTTTGAAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000902 GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006109 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009314 GO:0009416 GO:0009505 GO:0009628 GO:0009653 GO:0009663 GO:0009664 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009825 GO:0009826 GO:0009827 GO:0009831 GO:0009832 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010078 GO:0010215 GO:0010556 GO:0010675 GO:0010962 GO:0010981 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0019222 GO:0019827 GO:0022607 GO:0022622 GO:0030154 GO:0030198 GO:0030243 GO:0030244 GO:0030312 GO:0031323 GO:0031326 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0032989 GO:0033692 GO:0033993 GO:0034284 GO:0034330 GO:0034637 GO:0034645 GO:0040007 GO:0042221 GO:0042545 GO:0042546 GO:0042547 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044042 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045216 GO:0045229 GO:0048364 GO:0048507 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051273 GO:0051274 GO:0051716 GO:0060255 GO:0060560 GO:0065007 GO:0070726 GO:0071214 GO:0071478 GO:0071482 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0097305 GO:0097708 GO:0098727 GO:0098791 GO:0099402 GO:0104004 GO:1901576 GO:1901700 GO:1903338 GO:1905392 GO:2000112 GO:2001006 GO:2001009

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_92

Protein Analysis

528

Amino Acids

59.69

Weight (kDa)

7.24

Isoelectric Point (pI)

50.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002304)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08550
fragaria_vesca	FvH4_7g02090
malus_domestica	MD02G1296800.v1.1 MD07G1027100.v1.1
prunus_persica	Prupe.2G027600_v2.0.a1
pyrus_communis	pycom02g25000 pycom07g02090
rosa_chinensis	RchiOBHm_Chr1g0316351 RchiOBHm_Chr1g0319411 RchiOBHm_Chr1g0325671 RchiOBHm_Chr2g0129781 RchiOBHm_Chr5g0068801 RchiOBHm_Chr6g0245671 RchiOBHm_Chr7g0241271
rosa_laevigata	RLG00000030486 RLG00000030487 RLG00000034695
rosa_multiflora	Rmu_co8159340.1_g000001 Rmu_sc0006930.1_g000001 Rmu_sc0009208.1_g000025
rosa_roxburghii	Rroxscaffold_4G00328490 Rroxscaffold_5G00332930
rosa_rugosa	Rorug01G0027500 Rorug01G0027600 Rorug01G0027700 Rorug04G0157100 Rorug05G0507900
rosa_samantha	Rh1AG019800 Rh1AG039800 Rh1BG036600 Rh1CG038900 Rh1DG030900 Rh4CG067600 Rh5BG555100 Rh5CG577900 Rh6AG110800 Rh6AG176800
rosa_wichuraiana	Rw1G003180 Rw1G035870 Rw2G016160 Rw2G027780 Rw7G016140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	571
Acc65I	GGTACC	1 cut(s)	1215
AccB1I	GGYRCC	2 cut(s)	716, 1215
AccB7I	CCANNNNNTGG	2 cut(s)	168, 1525
AccII	CGCG	3 cut(s)	26, 141, 166
AciI	CCGC	9 cut(s)	29, 39, 114, 141, 144, 228, 274, 324, 327
AclWI	GGATC	3 cut(s)	177, 190, 234
AcoI	YGGCCR	3 cut(s)	271, 1302, 1527
AcsI	RAATTY	3 cut(s)	1073, 1154, 1514
AcuI	CTGAAG	2 cut(s)	486, 1321
AdeI	CACNNNGTG	1 cut(s)	1097
AfaI	GTAC	4 cut(s)	364, 870, 896, 1217
AfiI	CCNNNNNNNGG	4 cut(s)	168, 205, 1027, 1525
AgsI	TTSAA	6 cut(s)	337, 806, 850, 1185, 1505, 1580
AjiI	CACGTC	1 cut(s)	1097
AjnI	CCWGG	4 cut(s)	178, 493, 757, 1484
AjuI	GAANNNNNNNTTGG	4 cut(s)	179, 211, 538, 570
Alw21I	GWGCWC	1 cut(s)	528
Alw26I	GTCTC	2 cut(s)	465, 557
AlwI	GGATC	3 cut(s)	177, 190, 234
AlwNI	CAGNNNCTG	1 cut(s)	745
Ama87I	CYCGRG	1 cut(s)	527
AoxI	GGCC	4 cut(s)	210, 271, 1302, 1527
ApeKI	GCWGC	8 cut(s)	31, 276, 455, 745, 956, 1046, 1110, 1166
ApoI	RAATTY	3 cut(s)	1073, 1154, 1514
Asp718I	GGTACC	1 cut(s)	1215
AspLEI	GCGC	5 cut(s)	28, 36, 141, 168, 992
AspS9I	GGNCC	1 cut(s)	171
AsuC2I	CCSGG	1 cut(s)	201
AsuII	TTCGAA	1 cut(s)	785
AvaI	CYCGRG	1 cut(s)	527
AvaII	GGWCC	1 cut(s)	171
BaeI	ACNNNNGTAYC	2 cut(s)	822, 855
BalI	TGGCCA	1 cut(s)	1304
BamHI	GGATCC	1 cut(s)	182
BanI	GGYRCC	2 cut(s)	716, 1215
BanII	GRGCYC	1 cut(s)	528
BauI	CACGAG	1 cut(s)	909
BbsI	GAAGAC	2 cut(s)	1327, 1496
Bbv12I	GWGCWC	1 cut(s)	528
BbvI	GCAGC	8 cut(s)	18, 288, 442, 732, 943, 1033, 1097, 1153
BccI	CCATC	2 cut(s)	631, 993
BceAI	ACGGC	4 cut(s)	84, 215, 271, 1514
BciT130I	CCWGG	4 cut(s)	180, 495, 759, 1486
BciVI	GTATCC	2 cut(s)	481, 850
BcnI	CCSGG	1 cut(s)	201
BcoDI	GTCTC	2 cut(s)	465, 557
BfaI	CTAG	2 cut(s)	543, 1416
BfuI	GTATCC	2 cut(s)	481, 850
BglI	GCCNNNNNGGC	1 cut(s)	119
BlpI	GCTNAGC	1 cut(s)	1571
Bme1390I	CCNGG	5 cut(s)	180, 201, 495, 759, 1486
Bme18I	GGWCC	1 cut(s)	171
BmeT110I	CYCGRG	1 cut(s)	527
BmgBI	CACGTC	1 cut(s)	1097
BmgT120I	GGNCC	1 cut(s)	171
BmiI	GGNNCC	5 cut(s)	173, 184, 718, 825, 1217
BmrFI	CCNGG	5 cut(s)	180, 201, 495, 759, 1486
BmsI	GCATC	5 cut(s)	156, 649, 1130, 1284, 1361
BpiI	GAAGAC	2 cut(s)	1327, 1496
BpmI	CTGGAG	3 cut(s)	503, 516, 1533
Bpu1102I	GCTNAGC	1 cut(s)	1571
Bpu14I	TTCGAA	1 cut(s)	785
BpuMI	CCSGG	1 cut(s)	201
BsaJI	CCNNGG	8 cut(s)	117, 199, 392, 720, 758, 834, 1312, 1494
Bsc4I	CCNNNNNNNGG	4 cut(s)	168, 205, 1027, 1525
Bse1I	ACTGG	2 cut(s)	677, 1530
Bse3DI	GCAATG	1 cut(s)	1560
BseBI	CCWGG	4 cut(s)	180, 495, 759, 1486
BseDI	CCNNGG	8 cut(s)	117, 199, 392, 720, 758, 834, 1312, 1494
BseGI	GGATG	7 cut(s)	126, 147, 402, 664, 1243, 1504, 1564
BseLI	CCNNNNNNNGG	4 cut(s)	168, 205, 1027, 1525
BseMI	GCAATG	1 cut(s)	1560
BseMII	CTCAG	2 cut(s)	1185, 1585
BseNI	ACTGG	2 cut(s)	677, 1530
BseX3I	CGGCCG	1 cut(s)	271
BseXI	GCAGC	8 cut(s)	18, 288, 442, 732, 943, 1033, 1097, 1153
BseYI	CCCAGC	1 cut(s)	709
Bsh1236I	CGCG	3 cut(s)	26, 141, 166
Bsh1285I	CGRYCG	1 cut(s)	274
BshFI	GGCC	4 cut(s)	212, 273, 1304, 1529
BshNI	GGYRCC	2 cut(s)	716, 1215
BsiEI	CGRYCG	1 cut(s)	274
BsiHKAI	GWGCWC	1 cut(s)	528
BsiHKCI	CYCGRG	1 cut(s)	527
BsiSI	CCGG	1 cut(s)	201
BslFI	GGGAC	1 cut(s)	157
BslI	CCNNNNNNNGG	4 cut(s)	168, 205, 1027, 1525
BsmAI	GTCTC	2 cut(s)	465, 557
BsmBI	CGTCTC	1 cut(s)	465
BsmFI	GGGAC	1 cut(s)	157
BsmI	GAATGC	1 cut(s)	1169
BsnI	GGCC	4 cut(s)	212, 273, 1304, 1529
BsoBI	CYCGRG	1 cut(s)	527
Bsp119I	TTCGAA	1 cut(s)	785
Bsp1286I	GDGCHC	1 cut(s)	528
Bsp1407I	TGTACA	1 cut(s)	894
Bsp143I	GATC	6 cut(s)	182, 239, 379, 862, 970, 1099
Bsp1720I	GCTNAGC	1 cut(s)	1571
Bsp19I	CCATGG	1 cut(s)	392
BspACI	CCGC	9 cut(s)	29, 39, 114, 141, 144, 228, 274, 324, 327
BspANI	GGCC	4 cut(s)	212, 273, 1304, 1529
BspCNI	CTCAG	2 cut(s)	1186, 1584
BspFNI	CGCG	3 cut(s)	26, 141, 166
BspLI	GGNNCC	5 cut(s)	173, 184, 718, 825, 1217
BspPI	GGATC	3 cut(s)	177, 190, 234
BspT104I	TTCGAA	1 cut(s)	785
BspT107I	GGYRCC	2 cut(s)	716, 1215
BsrDI	GCAATG	1 cut(s)	1560
BsrGI	TGTACA	1 cut(s)	894
BsrI	ACTGG	2 cut(s)	677, 1530
BssECI	CCNNGG	8 cut(s)	117, 199, 392, 720, 758, 834, 1312, 1494
BssMI	GATC	6 cut(s)	182, 239, 379, 862, 970, 1099
BssSI	CACGAG	1 cut(s)	909
BssT1I	CCWWGG	5 cut(s)	117, 392, 720, 1312, 1494
Bst2BI	CACGAG	1 cut(s)	909
Bst2UI	CCWGG	4 cut(s)	180, 495, 759, 1486
Bst6I	CTCTTC	2 cut(s)	200, 1035
BstAPI	GCANNNNNTGC	2 cut(s)	659, 745
BstAUI	TGTACA	1 cut(s)	894
BstBI	TTCGAA	1 cut(s)	785
BstC8I	GCNNGC	2 cut(s)	373, 1115
BstDEI	CTNAG	4 cut(s)	342, 376, 1194, 1571
BstDSI	CCRYGG	1 cut(s)	392
BstF5I	GGATG	7 cut(s)	126, 147, 402, 664, 1243, 1504, 1564
BstFNI	CGCG	3 cut(s)	26, 141, 166
BstHHI	GCGC	5 cut(s)	28, 36, 141, 168, 992
BstKTI	GATC	6 cut(s)	185, 242, 382, 865, 973, 1102
BstMAI	GTCTC	2 cut(s)	465, 557
BstMBI	GATC	6 cut(s)	182, 239, 379, 862, 970, 1099
BstMCI	CGRYCG	1 cut(s)	274
BstMWI	GCNNNNNNNGC	7 cut(s)	119, 532, 659, 745, 754, 1187, 1301
BstNI	CCWGG	4 cut(s)	180, 495, 759, 1486
BstSCI	CCNGG	5 cut(s)	178, 199, 493, 757, 1484
BstUI	CGCG	3 cut(s)	26, 141, 166
BstV1I	GCAGC	8 cut(s)	18, 288, 442, 732, 943, 1033, 1097, 1153
BstV2I	GAAGAC	2 cut(s)	1327, 1496
BstX2I	RGATCY	1 cut(s)	182
BstXI	CCANNNNNNTGG	1 cut(s)	481
BstYI	RGATCY	1 cut(s)	182
BstZI	CGGCCG	1 cut(s)	271
BsuI	GTATCC	2 cut(s)	481, 850
BsuRI	GGCC	4 cut(s)	212, 273, 1304, 1529
BtgI	CCRYGG	1 cut(s)	392
BtrI	CACGTC	1 cut(s)	1097
BtsCI	GGATG	7 cut(s)	126, 147, 402, 664, 1243, 1504, 1564
BtsI	GCAGTG	2 cut(s)	805, 1471
BtsIMutI	CAGTG	2 cut(s)	805, 1471
Cac8I	GCNNGC	2 cut(s)	373, 1115
CaiI	CAGNNNCTG	1 cut(s)	745
CfoI	GCGC	5 cut(s)	28, 36, 141, 168, 992
Cfr13I	GGNCC	1 cut(s)	171
CseI	GACGC	2 cut(s)	250, 447
Csp6I	GTAC	4 cut(s)	363, 869, 895, 1216
CviAII	CATG	8 cut(s)	205, 393, 567, 594, 844, 866, 1147, 1220
CviQI	GTAC	4 cut(s)	363, 869, 895, 1216
DdeI	CTNAG	4 cut(s)	342, 376, 1194, 1571
DpnI	GATC	6 cut(s)	184, 241, 381, 864, 972, 1101
DpnII	GATC	6 cut(s)	182, 239, 379, 862, 970, 1099
DraIII	CACNNNGTG	1 cut(s)	1097
DrdI	GACNNNNNNGTC	1 cut(s)	571
DseDI	GACNNNNNNGTC	1 cut(s)	571
EaeI	YGGCCR	3 cut(s)	271, 1302, 1527
EagI	CGGCCG	1 cut(s)	271
Eam1104I	CTCTTC	2 cut(s)	200, 1035
EarI	CTCTTC	2 cut(s)	200, 1035
EciI	GGCGGA	3 cut(s)	28, 217, 313
Ecl136II	GAGCTC	1 cut(s)	526
EclXI	CGGCCG	1 cut(s)	271
Eco130I	CCWWGG	5 cut(s)	117, 392, 720, 1312, 1494
Eco147I	AGGCCT	1 cut(s)	212
Eco24I	GRGCYC	1 cut(s)	528
Eco47I	GGWCC	1 cut(s)	171
Eco52I	CGGCCG	1 cut(s)	271
Eco53kI	GAGCTC	1 cut(s)	526
Eco57I	CTGAAG	2 cut(s)	486, 1321
Eco88I	CYCGRG	1 cut(s)	527
EcoICRI	GAGCTC	1 cut(s)	526
EcoRI	GAATTC	1 cut(s)	1514
EcoRII	CCWGG	4 cut(s)	178, 493, 757, 1484
EcoT14I	CCWWGG	5 cut(s)	117, 392, 720, 1312, 1494
EcoT38I	GRGCYC	1 cut(s)	528
ErhI	CCWWGG	5 cut(s)	117, 392, 720, 1312, 1494
Esp3I	CGTCTC	1 cut(s)	465
FaeI	CATG	8 cut(s)	208, 396, 570, 597, 847, 869, 1150, 1223
FaqI	GGGAC	1 cut(s)	157
FatI	CATG	8 cut(s)	204, 392, 566, 593, 843, 865, 1146, 1219
FauNDI	CATATG	1 cut(s)	1066
FokI	GGATG	7 cut(s)	113, 134, 409, 671, 1250, 1511, 1571
FriOI	GRGCYC	1 cut(s)	528
FspBI	CTAG	2 cut(s)	543, 1416
GlaI	GCGC	5 cut(s)	27, 35, 140, 167, 991
GsaI	CCCAGC	1 cut(s)	713
GsuI	CTGGAG	3 cut(s)	503, 516, 1533
HaeIII	GGCC	4 cut(s)	212, 273, 1304, 1529
HapII	CCGG	1 cut(s)	201
HgaI	GACGC	2 cut(s)	250, 447
HhaI	GCGC	5 cut(s)	28, 36, 141, 168, 992
Hin1II	CATG	8 cut(s)	208, 396, 570, 597, 847, 869, 1150, 1223
Hin6I	GCGC	5 cut(s)	26, 34, 139, 166, 990
HinP1I	GCGC	5 cut(s)	26, 34, 139, 166, 990
HinfI	GANTC	7 cut(s)	320, 485, 902, 963, 1282, 1325, 1332
HpaII	CCGG	1 cut(s)	201
Hpy188I	TCNGA	7 cut(s)	239, 256, 306, 384, 552, 933, 1081
Hpy188III	TCNNGA	8 cut(s)	464, 482, 686, 850, 1092, 1279, 1329, 1416
Hpy99I	CGWCG	5 cut(s)	236, 292, 370, 1098, 1447
HpyAV	CCTTC	2 cut(s)	73, 440
HpyCH4IV	ACGT	2 cut(s)	365, 1096
HpyCH4V	TGCA	5 cut(s)	597, 1113, 1169, 1190, 1352
HpyF10VI	GCNNNNNNNGC	7 cut(s)	119, 532, 659, 745, 754, 1187, 1301
HpyF3I	CTNAG	4 cut(s)	342, 376, 1194, 1571
HpySE526I	ACGT	2 cut(s)	365, 1096
Hsp92II	CATG	8 cut(s)	208, 396, 570, 597, 847, 869, 1150, 1223
HspAI	GCGC	5 cut(s)	26, 34, 139, 166, 990
KpnI	GGTACC	1 cut(s)	1219
Kzo9I	GATC	6 cut(s)	182, 239, 379, 862, 970, 1099
LmnI	GCTCC	5 cut(s)	41, 81, 523, 532, 1300
Lsp1109I	GCAGC	8 cut(s)	18, 288, 442, 732, 943, 1033, 1097, 1153
LweI	GCATC	5 cut(s)	156, 649, 1130, 1284, 1361
MaeI	CTAG	2 cut(s)	543, 1416
MaeII	ACGT	2 cut(s)	365, 1096
MaeIII	GTNAC	2 cut(s)	699, 1406
MalI	GATC	6 cut(s)	184, 241, 381, 864, 972, 1101
MboI	GATC	6 cut(s)	182, 239, 379, 862, 970, 1099
MboII	GAAGA	7 cut(s)	187, 865, 1052, 1139, 1327, 1462, 1501
MfeI	CAATTG	1 cut(s)	1395
MflI	RGATCY	1 cut(s)	182
MhlI	GDGCHC	1 cut(s)	528
MlsI	TGGCCA	1 cut(s)	1304
MluNI	TGGCCA	1 cut(s)	1304
MlyI	GAGTC	4 cut(s)	494, 1276, 1334, 1341
MmeI	TCCRAC	3 cut(s)	210, 530, 1131
Mox20I	TGGCCA	1 cut(s)	1304
MscI	TGGCCA	1 cut(s)	1304
MseI	TTAA	2 cut(s)	819, 1085
MslI	CAYNNNNRTG	1 cut(s)	997
Msp20I	TGGCCA	1 cut(s)	1304
MspA1I	CMGCKG	3 cut(s)	31, 713, 956
MspI	CCGG	1 cut(s)	201
MspR9I	CCNGG	5 cut(s)	180, 201, 495, 759, 1486
MunI	CAATTG	1 cut(s)	1395
Mva1269I	GAATGC	1 cut(s)	1169
MvaI	CCWGG	4 cut(s)	180, 495, 759, 1486
MvnI	CGCG	3 cut(s)	26, 141, 166
MwoI	GCNNNNNNNGC	7 cut(s)	119, 532, 659, 745, 754, 1187, 1301
NciI	CCSGG	1 cut(s)	201
NcoI	CCATGG	1 cut(s)	392
NdeI	CATATG	1 cut(s)	1066
NdeII	GATC	6 cut(s)	182, 239, 379, 862, 970, 1099
NlaIII	CATG	8 cut(s)	208, 396, 570, 597, 847, 869, 1150, 1223
NlaIV	GGNNCC	5 cut(s)	173, 184, 718, 825, 1217
NmeAIII	GCCGAG	1 cut(s)	249
NspV	TTCGAA	1 cut(s)	785
PaeR7I	CTCGAG	1 cut(s)	527
PceI	AGGCCT	1 cut(s)	212
PctI	GAATGC	1 cut(s)	1169
PfeI	GAWTC	3 cut(s)	320, 902, 963
PflMI	CCANNNNNTGG	2 cut(s)	168, 1525
PfoI	TCCNGGA	1 cut(s)	178
PleI	GAGTC	4 cut(s)	493, 1276, 1333, 1340
PpsI	GAGTC	4 cut(s)	493, 1276, 1333, 1340
Psp124BI	GAGCTC	1 cut(s)	528
Psp6I	CCWGG	4 cut(s)	178, 493, 757, 1484
PspFI	CCCAGC	1 cut(s)	709
PspGI	CCWGG	4 cut(s)	178, 493, 757, 1484
PspN4I	GGNNCC	5 cut(s)	173, 184, 718, 825, 1217
PspPI	GGNCC	1 cut(s)	171
PspXI	VCTCGAGB	1 cut(s)	527
PsrI	GAACNNNNNNTAC	2 cut(s)	462, 494
PstNI	CAGNNNCTG	1 cut(s)	745
PsuI	RGATCY	1 cut(s)	182
PvuII	CAGCTG	2 cut(s)	713, 956
RsaI	GTAC	4 cut(s)	364, 870, 896, 1217
RsaNI	GTAC	4 cut(s)	363, 869, 895, 1216
RseI	CAYNNNNRTG	1 cut(s)	997
SacI	GAGCTC	1 cut(s)	528
SaqAI	TTAA	2 cut(s)	819, 1085
Sau3AI	GATC	6 cut(s)	182, 239, 379, 862, 970, 1099
Sau96I	GGNCC	1 cut(s)	171
SchI	GAGTC	4 cut(s)	494, 1276, 1334, 1341
ScrFI	CCNGG	5 cut(s)	180, 201, 495, 759, 1486
SduI	GDGCHC	1 cut(s)	528
SfaNI	GCATC	5 cut(s)	156, 649, 1130, 1284, 1361
Sfr274I	CTCGAG	1 cut(s)	527
SfuI	TTCGAA	1 cut(s)	785
SinI	GGWCC	1 cut(s)	171
SlaI	CTCGAG	1 cut(s)	527
SmiMI	CAYNNNNRTG	1 cut(s)	997
SmlI	CTYRAG	1 cut(s)	527
SmoI	CTYRAG	1 cut(s)	527
SseBI	AGGCCT	1 cut(s)	212
SsiI	CCGC	9 cut(s)	29, 39, 114, 141, 144, 228, 274, 324, 327
SspMI	CTAG	2 cut(s)	543, 1416
SstI	GAGCTC	1 cut(s)	528
StuI	AGGCCT	1 cut(s)	212
StyD4I	CCNGG	5 cut(s)	178, 199, 493, 757, 1484
StyI	CCWWGG	5 cut(s)	117, 392, 720, 1312, 1494
TaiI	ACGT	2 cut(s)	368, 1099
TaqI	TCGA	5 cut(s)	528, 785, 961, 1285, 1445
TatI	WGTACW	1 cut(s)	894
TauI	GCSGC	6 cut(s)	31, 116, 144, 147, 276, 329
TfiI	GAWTC	3 cut(s)	320, 902, 963
Tru1I	TTAA	2 cut(s)	819, 1085
Tru9I	TTAA	2 cut(s)	819, 1085
TscAI	CASTG	2 cut(s)	805, 1471
TseI	GCWGC	8 cut(s)	31, 276, 455, 745, 956, 1046, 1110, 1166
TspDTI	ATGAA	6 cut(s)	115, 671, 1028, 1135, 1162, 1236
TspGWI	ACGGA	1 cut(s)	968
TspRI	CASTG	2 cut(s)	805, 1471
Van91I	CCANNNNNTGG	2 cut(s)	168, 1525
VpaK11BI	GGWCC	1 cut(s)	171
XapI	RAATTY	3 cut(s)	1073, 1154, 1514
XbaI	TCTAGA	1 cut(s)	1415
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1492
XhoI	CTCGAG	1 cut(s)	527
XspI	CTAG	2 cut(s)	543, 1416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.