DNA-directed RNA polymerases I, II, and III subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 265 |
| Acc36I | ACCTGC | 1 cut(s) | 265 |
| AccI | GTMKAC | 1 cut(s) | 242 |
| AciI | CCGC | 1 cut(s) | 181 |
| AclWI | GGATC | 1 cut(s) | 278 |
| AcsI | RAATTY | 1 cut(s) | 39 |
| AcvI | CACGTG | 1 cut(s) | 314 |
| AfaI | GTAC | 1 cut(s) | 371 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 223 |
| AgsI | TTSAA | 1 cut(s) | 124 |
| AluBI | AGCT | 3 cut(s) | 95, 192, 262 |
| AluI | AGCT | 3 cut(s) | 95, 192, 262 |
| Alw21I | GWGCWC | 1 cut(s) | 131 |
| Alw26I | GTCTC | 1 cut(s) | 341 |
| AlwI | GGATC | 1 cut(s) | 278 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 95 |
| AoxI | GGCC | 1 cut(s) | 338 |
| ApoI | RAATTY | 1 cut(s) | 39 |
| AsuII | TTCGAA | 1 cut(s) | 43 |
| BauI | CACGAG | 1 cut(s) | 25 |
| BbrPI | CACGTG | 1 cut(s) | 314 |
| BbsI | GAAGAC | 1 cut(s) | 202 |
| Bbv12I | GWGCWC | 1 cut(s) | 131 |
| BclI | TGATCA | 1 cut(s) | 196 |
| BcoDI | GTCTC | 1 cut(s) | 341 |
| BfuAI | ACCTGC | 1 cut(s) | 265 |
| BglII | AGATCT | 1 cut(s) | 157 |
| BmsI | GCATC | 1 cut(s) | 261 |
| BpiI | GAAGAC | 1 cut(s) | 202 |
| Bpu14I | TTCGAA | 1 cut(s) | 43 |
| BsaAI | YACGTR | 2 cut(s) | 314, 369 |
| BsaJI | CCNNGG | 1 cut(s) | 266 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 223 |
| Bse1I | ACTGG | 1 cut(s) | 287 |
| BseDI | CCNNGG | 1 cut(s) | 266 |
| BseGI | GGATG | 1 cut(s) | 276 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 223 |
| BseMII | CTCAG | 1 cut(s) | 87 |
| BseNI | ACTGG | 1 cut(s) | 287 |
| BshFI | GGCC | 1 cut(s) | 340 |
| BsiHKAI | GWGCWC | 1 cut(s) | 131 |
| BsiSI | CCGG | 1 cut(s) | 354 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 223 |
| BsmAI | GTCTC | 1 cut(s) | 341 |
| BsnI | GGCC | 1 cut(s) | 340 |
| Bsp119I | TTCGAA | 1 cut(s) | 43 |
| Bsp1286I | GDGCHC | 1 cut(s) | 131 |
| Bsp143I | GATC | 5 cut(s) | 70, 99, 157, 196, 283 |
| BspACI | CCGC | 1 cut(s) | 181 |
| BspANI | GGCC | 1 cut(s) | 340 |
| BspCNI | CTCAG | 1 cut(s) | 88 |
| BspMI | ACCTGC | 1 cut(s) | 265 |
| BspPI | GGATC | 1 cut(s) | 278 |
| BspT104I | TTCGAA | 1 cut(s) | 43 |
| BsrI | ACTGG | 1 cut(s) | 287 |
| BssECI | CCNNGG | 1 cut(s) | 266 |
| BssMI | GATC | 5 cut(s) | 70, 99, 157, 196, 283 |
| BssNAI | GTATAC | 1 cut(s) | 243 |
| BssSI | CACGAG | 1 cut(s) | 25 |
| Bst1107I | GTATAC | 1 cut(s) | 243 |
| Bst2BI | CACGAG | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 3 cut(s) | 52, 247, 374 |
| BstBAI | YACGTR | 2 cut(s) | 314, 369 |
| BstBI | TTCGAA | 1 cut(s) | 43 |
| BstDEI | CTNAG | 2 cut(s) | 82, 96 |
| BstF5I | GGATG | 1 cut(s) | 276 |
| BstKTI | GATC | 5 cut(s) | 73, 102, 160, 199, 286 |
| BstMAI | GTCTC | 1 cut(s) | 341 |
| BstMBI | GATC | 5 cut(s) | 70, 99, 157, 196, 283 |
| BstV2I | GAAGAC | 1 cut(s) | 202 |
| BstX2I | RGATCY | 1 cut(s) | 157 |
| BstYI | RGATCY | 1 cut(s) | 157 |
| BstZ17I | GTATAC | 1 cut(s) | 243 |
| BsuRI | GGCC | 1 cut(s) | 340 |
| BtsCI | GGATG | 1 cut(s) | 276 |
| BveI | ACCTGC | 1 cut(s) | 265 |
| CaiI | CAGNNNCTG | 1 cut(s) | 95 |
| Csp6I | GTAC | 1 cut(s) | 370 |
| CviAII | CATG | 2 cut(s) | 106, 145 |
| CviJI | RGCY | 7 cut(s) | 5, 31, 95, 192, 262, 307, 340 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 31, 95, 192, 262, 307, 340 |
| CviQI | GTAC | 1 cut(s) | 370 |
| DdeI | CTNAG | 2 cut(s) | 82, 96 |
| DpnI | GATC | 5 cut(s) | 72, 101, 159, 198, 285 |
| DpnII | GATC | 5 cut(s) | 70, 99, 157, 196, 283 |
| Eco72I | CACGTG | 1 cut(s) | 314 |
| EcoRI | GAATTC | 1 cut(s) | 39 |
| FaeI | CATG | 2 cut(s) | 109, 148 |
| FaiI | YATR | 8 cut(s) | 107, 133, 135, 146, 205, 207, 243, 378 |
| FatI | CATG | 2 cut(s) | 105, 144 |
| FauNDI | CATATG | 1 cut(s) | 133 |
| FbaI | TGATCA | 1 cut(s) | 196 |
| FblI | GTMKAC | 1 cut(s) | 242 |
| FokI | GGATG | 1 cut(s) | 283 |
| HaeIII | GGCC | 1 cut(s) | 340 |
| HapII | CCGG | 1 cut(s) | 354 |
| Hin1II | CATG | 2 cut(s) | 109, 148 |
| HpaII | CCGG | 1 cut(s) | 354 |
| Hpy166II | GTNNAC | 2 cut(s) | 243, 317 |
| Hpy188I | TCNGA | 4 cut(s) | 13, 196, 201, 270 |
| Hpy188III | TCNNGA | 4 cut(s) | 25, 74, 124, 161 |
| Hpy8I | GTNNAC | 2 cut(s) | 243, 317 |
| HpyCH4III | ACNGT | 3 cut(s) | 52, 247, 374 |
| HpyCH4IV | ACGT | 3 cut(s) | 313, 363, 368 |
| HpyCH4V | TGCA | 3 cut(s) | 58, 274, 293 |
| HpyF3I | CTNAG | 2 cut(s) | 82, 96 |
| HpySE526I | ACGT | 3 cut(s) | 313, 363, 368 |
| Hsp92II | CATG | 2 cut(s) | 109, 148 |
| Ksp22I | TGATCA | 1 cut(s) | 196 |
| Kzo9I | GATC | 5 cut(s) | 70, 99, 157, 196, 283 |
| LpnPI | CCDG | 4 cut(s) | 260, 300, 322, 367 |
| LweI | GCATC | 1 cut(s) | 261 |
| MaeII | ACGT | 3 cut(s) | 313, 363, 368 |
| MaeIII | GTNAC | 3 cut(s) | 85, 185, 364 |
| MalI | GATC | 5 cut(s) | 72, 101, 159, 198, 285 |
| MboI | GATC | 5 cut(s) | 70, 99, 157, 196, 283 |
| MboII | GAAGA | 7 cut(s) | 26, 57, 167, 202, 205, 340, 369 |
| MflI | RGATCY | 1 cut(s) | 157 |
| MhlI | GDGCHC | 1 cut(s) | 131 |
| MluCI | AATT | 2 cut(s) | 39, 119 |
| MnlI | CCTC | 4 cut(s) | 21, 217, 231, 276 |
| MspI | CCGG | 1 cut(s) | 354 |
| NdeI | CATATG | 1 cut(s) | 133 |
| NdeII | GATC | 5 cut(s) | 70, 99, 157, 196, 283 |
| NlaIII | CATG | 2 cut(s) | 109, 148 |
| NmuCI | GTSAC | 1 cut(s) | 364 |
| NspV | TTCGAA | 1 cut(s) | 43 |
| PaqCI | CACCTGC | 1 cut(s) | 265 |
| PmaCI | CACGTG | 1 cut(s) | 314 |
| PmlI | CACGTG | 1 cut(s) | 314 |
| Ppu21I | YACGTR | 2 cut(s) | 314, 369 |
| PspCI | CACGTG | 1 cut(s) | 314 |
| PstNI | CAGNNNCTG | 1 cut(s) | 95 |
| PsuI | RGATCY | 1 cut(s) | 157 |
| RsaI | GTAC | 1 cut(s) | 371 |
| RsaNI | GTAC | 1 cut(s) | 370 |
| Sau3AI | GATC | 5 cut(s) | 70, 99, 157, 196, 283 |
| SduI | GDGCHC | 1 cut(s) | 131 |
| SfaNI | GCATC | 1 cut(s) | 261 |
| SfuI | TTCGAA | 1 cut(s) | 43 |
| Sse9I | AATT | 2 cut(s) | 39, 119 |
| SsiI | CCGC | 1 cut(s) | 181 |
| TaaI | ACNGT | 3 cut(s) | 52, 247, 374 |
| TaiI | ACGT | 3 cut(s) | 316, 366, 371 |
| TaqI | TCGA | 1 cut(s) | 43 |
| TasI | AATT | 2 cut(s) | 39, 119 |
| TseFI | GTSAC | 1 cut(s) | 364 |
| Tsp45I | GTSAC | 1 cut(s) | 364 |
| TspDTI | ATGAA | 2 cut(s) | 33, 161 |
| XapI | RAATTY | 1 cut(s) | 39 |
| XmiI | GTMKAC | 1 cut(s) | 242 |