DNA-directed RNA polymerases I, II, and III subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 48 |
| AfaI | GTAC | 1 cut(s) | 311 |
| AgsI | TTSAA | 3 cut(s) | 306, 320, 328 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 165, 197 |
| AlwI | GGATC | 1 cut(s) | 48 |
| AspS9I | GGNCC | 1 cut(s) | 106 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| AvaII | GGWCC | 1 cut(s) | 106 |
| BclI | TGATCA | 1 cut(s) | 145 |
| Bme18I | GGWCC | 1 cut(s) | 106 |
| BmgT120I | GGNCC | 1 cut(s) | 106 |
| BsaBI | GATNNNNATC | 1 cut(s) | 45 |
| Bse8I | GATNNNNATC | 1 cut(s) | 45 |
| BseJI | GATNNNNATC | 1 cut(s) | 45 |
| Bsp143I | GATC | 4 cut(s) | 16, 40, 46, 145 |
| BspPI | GGATC | 1 cut(s) | 48 |
| BssMI | GATC | 4 cut(s) | 16, 40, 46, 145 |
| Bst6I | CTCTTC | 1 cut(s) | 122 |
| BstDEI | CTNAG | 1 cut(s) | 247 |
| BstKTI | GATC | 4 cut(s) | 19, 43, 49, 148 |
| BstMBI | GATC | 4 cut(s) | 16, 40, 46, 145 |
| BstNSI | RCATGY | 1 cut(s) | 216 |
| Cfr13I | GGNCC | 1 cut(s) | 106 |
| Csp6I | GTAC | 1 cut(s) | 310 |
| CviAII | CATG | 5 cut(s) | 55, 83, 94, 213, 217 |
| CviQI | GTAC | 1 cut(s) | 310 |
| DdeI | CTNAG | 1 cut(s) | 247 |
| DpnI | GATC | 4 cut(s) | 18, 42, 48, 147 |
| DpnII | GATC | 4 cut(s) | 16, 40, 46, 145 |
| DraI | TTTAAA | 1 cut(s) | 73 |
| Eam1104I | CTCTTC | 1 cut(s) | 122 |
| EarI | CTCTTC | 1 cut(s) | 122 |
| Eco47I | GGWCC | 1 cut(s) | 106 |
| EcoO109I | RGGNCCY | 1 cut(s) | 106 |
| EcoT22I | ATGCAT | 1 cut(s) | 218 |
| FaeI | CATG | 5 cut(s) | 58, 86, 97, 216, 220 |
| FaiI | YATR | 6 cut(s) | 56, 84, 95, 156, 214, 218 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 299, 331 |
| FatI | CATG | 5 cut(s) | 54, 82, 93, 212, 216 |
| FbaI | TGATCA | 1 cut(s) | 145 |
| Hin1II | CATG | 5 cut(s) | 58, 86, 97, 216, 220 |
| HinfI | GANTC | 3 cut(s) | 140, 220, 268 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy188I | TCNGA | 3 cut(s) | 145, 150, 267 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 44, 190, 224, 320 |
| HpyAV | CCTTC | 2 cut(s) | 117, 322 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 216, 278 |
| HpyF3I | CTNAG | 1 cut(s) | 247 |
| Hsp92II | CATG | 5 cut(s) | 58, 86, 97, 216, 220 |
| Ksp22I | TGATCA | 1 cut(s) | 145 |
| Kzo9I | GATC | 4 cut(s) | 16, 40, 46, 145 |
| LpnPI | CCDG | 4 cut(s) | 5, 180, 209, 285 |
| MaeIII | GTNAC | 2 cut(s) | 134, 203 |
| MalI | GATC | 4 cut(s) | 18, 42, 48, 147 |
| MboI | GATC | 4 cut(s) | 16, 40, 46, 145 |
| MboII | GAAGA | 1 cut(s) | 139 |
| MlyI | GAGTC | 2 cut(s) | 149, 262 |
| MnlI | CCTC | 3 cut(s) | 97, 125, 295 |
| Mph1103I | ATGCAT | 1 cut(s) | 218 |
| MseI | TTAA | 1 cut(s) | 72 |
| MslI | CAYNNNNRTG | 3 cut(s) | 59, 98, 215 |
| NdeII | GATC | 4 cut(s) | 16, 40, 46, 145 |
| NlaIII | CATG | 5 cut(s) | 58, 86, 97, 216, 220 |
| NmuCI | GTSAC | 1 cut(s) | 134 |
| NsiI | ATGCAT | 1 cut(s) | 218 |
| NspI | RCATGY | 1 cut(s) | 216 |
| PfeI | GAWTC | 1 cut(s) | 220 |
| PflFI | GACNNNGTC | 1 cut(s) | 61 |
| PleI | GAGTC | 2 cut(s) | 148, 262 |
| PpsI | GAGTC | 2 cut(s) | 148, 262 |
| PpuMI | RGGWCCY | 1 cut(s) | 106 |
| Psp5II | RGGWCCY | 1 cut(s) | 106 |
| PspPI | GGNCC | 1 cut(s) | 106 |
| PspPPI | RGGWCCY | 1 cut(s) | 106 |
| PsyI | GACNNNGTC | 1 cut(s) | 61 |
| RsaI | GTAC | 1 cut(s) | 311 |
| RsaNI | GTAC | 1 cut(s) | 310 |
| RseI | CAYNNNNRTG | 3 cut(s) | 59, 98, 215 |
| SaqAI | TTAA | 1 cut(s) | 72 |
| Sau3AI | GATC | 4 cut(s) | 16, 40, 46, 145 |
| Sau96I | GGNCC | 1 cut(s) | 106 |
| SchI | GAGTC | 2 cut(s) | 149, 262 |
| SetI | ASST | 4 cut(s) | 111, 136, 287, 304 |
| SinI | GGWCC | 1 cut(s) | 106 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 59, 98, 215 |
| SspI | AATATT | 1 cut(s) | 33 |
| TfiI | GAWTC | 1 cut(s) | 220 |
| Tru1I | TTAA | 1 cut(s) | 72 |
| Tru9I | TTAA | 1 cut(s) | 72 |
| TseFI | GTSAC | 1 cut(s) | 134 |
| Tsp45I | GTSAC | 1 cut(s) | 134 |
| TspDTI | ATGAA | 3 cut(s) | 110, 186, 233 |
| Tth111I | GACNNNGTC | 1 cut(s) | 61 |
| VpaK11BI | GGWCC | 1 cut(s) | 106 |
| XceI | RCATGY | 1 cut(s) | 216 |
| Zsp2I | ATGCAT | 1 cut(s) | 218 |