Flavonoid 3'-monooxygenase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| p450 | PF00067 | 35 - 493 | 1.8e-102 | Cytochrome P450 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 358, 378 |
| AccI | GTMKAC | 1 cut(s) | 1475 |
| AccII | CGCG | 3 cut(s) | 450, 478, 529 |
| AccIII | TCCGGA | 1 cut(s) | 859 |
| AciI | CCGC | 1 cut(s) | 388 |
| AclI | AACGTT | 1 cut(s) | 536 |
| AclWI | GGATC | 3 cut(s) | 216, 229, 870 |
| AcoI | YGGCCR | 1 cut(s) | 227 |
| AcsI | RAATTY | 1 cut(s) | 946 |
| AcuI | CTGAAG | 3 cut(s) | 397, 562, 713 |
| AcyI | GRCGYC | 2 cut(s) | 359, 379 |
| AfaI | GTAC | 4 cut(s) | 326, 443, 575, 716 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 131, 495, 1355 |
| AflIII | ACRYGT | 2 cut(s) | 630, 1395 |
| AgsI | TTSAA | 7 cut(s) | 667, 739, 844, 869, 1122, 1148, 1411 |
| AjnI | CCWGG | 4 cut(s) | 686, 906, 1056, 1348 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 576, 608 |
| Alw21I | GWGCWC | 3 cut(s) | 411, 545, 783 |
| Alw26I | GTCTC | 3 cut(s) | 1047, 1088, 1215 |
| AlwI | GGATC | 3 cut(s) | 216, 229, 870 |
| Ama87I | CYCGRG | 1 cut(s) | 1188 |
| Aor13HI | TCCGGA | 1 cut(s) | 859 |
| AoxI | GGCC | 6 cut(s) | 20, 122, 227, 385, 732, 1357 |
| ApeKI | GCWGC | 3 cut(s) | 208, 314, 1315 |
| ApoI | RAATTY | 1 cut(s) | 946 |
| AspA2I | CCTAGG | 2 cut(s) | 1360, 1514 |
| AspLEI | GCGC | 4 cut(s) | 361, 381, 480, 531 |
| AspS9I | GGNCC | 4 cut(s) | 110, 152, 197, 1489 |
| AsuC2I | CCSGG | 2 cut(s) | 108, 226 |
| AsuHPI | GGTGA | 4 cut(s) | 155, 380, 559, 895 |
| AvaI | CYCGRG | 1 cut(s) | 1188 |
| AvaII | GGWCC | 4 cut(s) | 110, 152, 197, 1489 |
| AvrII | CCTAGG | 2 cut(s) | 1360, 1514 |
| BaeGI | GKGCMC | 1 cut(s) | 1349 |
| BamHI | GGATCC | 1 cut(s) | 221 |
| BanI | GGYRCC | 2 cut(s) | 358, 378 |
| BanII | GRGCYC | 1 cut(s) | 411 |
| Bbv12I | GWGCWC | 3 cut(s) | 411, 545, 783 |
| BbvI | GCAGC | 3 cut(s) | 220, 326, 1302 |
| BccI | CCATC | 3 cut(s) | 787, 1032, 1536 |
| BciT130I | CCWGG | 4 cut(s) | 688, 908, 1058, 1350 |
| BciVI | GTATCC | 2 cut(s) | 675, 925 |
| BclI | TGATCA | 1 cut(s) | 283 |
| BcnI | CCSGG | 2 cut(s) | 108, 226 |
| BcoDI | GTCTC | 3 cut(s) | 1047, 1088, 1215 |
| BfaI | CTAG | 7 cut(s) | 44, 428, 884, 1139, 1361, 1439, 1515 |
| BfmI | CTRYAG | 2 cut(s) | 249, 312 |
| BfoI | RGCGCY | 2 cut(s) | 362, 382 |
| BfuI | GTATCC | 2 cut(s) | 675, 925 |
| BisI | GCNGC | 4 cut(s) | 209, 315, 388, 1316 |
| BlnI | CCTAGG | 2 cut(s) | 1360, 1514 |
| BlsI | GCNGC | 4 cut(s) | 210, 316, 389, 1317 |
| BmcAI | AGTACT | 1 cut(s) | 575 |
| Bme1390I | CCNGG | 6 cut(s) | 108, 226, 688, 908, 1058, 1350 |
| Bme18I | GGWCC | 4 cut(s) | 110, 152, 197, 1489 |
| BmeT110I | CYCGRG | 1 cut(s) | 1188 |
| BmgT120I | GGNCC | 4 cut(s) | 110, 152, 197, 1489 |
| BmiI | GGNNCC | 7 cut(s) | 111, 223, 360, 380, 1491, 1512, 1520 |
| BmrFI | CCNGG | 6 cut(s) | 108, 226, 688, 908, 1058, 1350 |
| BmsI | GCATC | 1 cut(s) | 1228 |
| BoxI | GACNNNNGTC | 1 cut(s) | 430 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 509, 541 |
| BpuEI | CTTGAG | 1 cut(s) | 197 |
| BpuMI | CCSGG | 2 cut(s) | 108, 226 |
| BsaBI | GATNNNNATC | 1 cut(s) | 398 |
| BsaHI | GRCGYC | 2 cut(s) | 359, 379 |
| BsaI | GGTCTC | 2 cut(s) | 1047, 1215 |
| BsaJI | CCNNGG | 9 cut(s) | 119, 382, 600, 686, 906, 1348, 1360, 1481, 1514 |
| BsaWI | WCCGGW | 1 cut(s) | 859 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 131, 495, 1355 |
| Bse118I | RCCGGY | 1 cut(s) | 502 |
| Bse1I | ACTGG | 4 cut(s) | 230, 683, 753, 1418 |
| Bse3DI | GCAATG | 2 cut(s) | 237, 966 |
| Bse8I | GATNNNNATC | 1 cut(s) | 398 |
| BseAI | TCCGGA | 1 cut(s) | 859 |
| BseBI | CCWGG | 4 cut(s) | 688, 908, 1058, 1350 |
| BseDI | CCNNGG | 9 cut(s) | 119, 382, 600, 686, 906, 1348, 1360, 1481, 1514 |
| BseGI | GGATG | 3 cut(s) | 781, 1243, 1347 |
| BseJI | GATNNNNATC | 1 cut(s) | 398 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 131, 495, 1355 |
| BseMI | GCAATG | 2 cut(s) | 237, 966 |
| BseMII | CTCAG | 2 cut(s) | 396, 644 |
| BseNI | ACTGG | 4 cut(s) | 230, 683, 753, 1418 |
| BseRI | GAGGAG | 3 cut(s) | 470, 813, 1262 |
| BseSI | GKGCMC | 1 cut(s) | 1349 |
| BseXI | GCAGC | 3 cut(s) | 220, 326, 1302 |
| Bsh1236I | CGCG | 3 cut(s) | 450, 478, 529 |
| BshFI | GGCC | 6 cut(s) | 22, 124, 229, 387, 734, 1359 |
| BshNI | GGYRCC | 2 cut(s) | 358, 378 |
| BsiHKAI | GWGCWC | 3 cut(s) | 411, 545, 783 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1188 |
| BsiSI | CCGG | 5 cut(s) | 107, 226, 503, 860, 921 |
| BslFI | GGGAC | 4 cut(s) | 689, 1198, 1314, 1475 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 131, 495, 1355 |
| BsmAI | GTCTC | 3 cut(s) | 1047, 1088, 1215 |
| BsmFI | GGGAC | 4 cut(s) | 689, 1198, 1314, 1475 |
| BsnI | GGCC | 6 cut(s) | 22, 124, 229, 387, 734, 1359 |
| Bso31I | GGTCTC | 2 cut(s) | 1047, 1215 |
| BsoBI | CYCGRG | 1 cut(s) | 1188 |
| Bsp1286I | GDGCHC | 4 cut(s) | 411, 545, 783, 1349 |
| Bsp13I | TCCGGA | 1 cut(s) | 859 |
| Bsp143I | GATC | 3 cut(s) | 221, 283, 862 |
| Bsp19I | CCATGG | 1 cut(s) | 119 |
| BspACI | CCGC | 1 cut(s) | 388 |
| BspANI | GGCC | 6 cut(s) | 22, 124, 229, 387, 734, 1359 |
| BspCNI | CTCAG | 2 cut(s) | 397, 645 |
| BspEI | TCCGGA | 1 cut(s) | 859 |
| BspFNI | CGCG | 3 cut(s) | 450, 478, 529 |
| BspHI | TCATGA | 2 cut(s) | 760, 1086 |
| BspLI | GGNNCC | 7 cut(s) | 111, 223, 360, 380, 1491, 1512, 1520 |
| BspMAI | CTGCAG | 2 cut(s) | 253, 316 |
| BspPI | GGATC | 3 cut(s) | 216, 229, 870 |
| BspQI | GCTCTTC | 2 cut(s) | 416, 1002 |
| BspT107I | GGYRCC | 2 cut(s) | 358, 378 |
| BspTNI | GGTCTC | 2 cut(s) | 1047, 1215 |
| BsrDI | GCAATG | 2 cut(s) | 237, 966 |
| BsrFI | RCCGGY | 1 cut(s) | 502 |
| BsrI | ACTGG | 4 cut(s) | 230, 683, 753, 1418 |
| BssAI | RCCGGY | 1 cut(s) | 502 |
| BssECI | CCNNGG | 9 cut(s) | 119, 382, 600, 686, 906, 1348, 1360, 1481, 1514 |
| BssMI | GATC | 3 cut(s) | 221, 283, 862 |
| BssNI | GRCGYC | 2 cut(s) | 359, 379 |
| BssT1I | CCWWGG | 4 cut(s) | 119, 382, 1360, 1514 |
| Bst2UI | CCWGG | 4 cut(s) | 688, 908, 1058, 1350 |
| Bst4CI | ACNGT | 3 cut(s) | 368, 547, 890 |
| Bst6I | CTCTTC | 2 cut(s) | 416, 1002 |
| BstACI | GRCGYC | 2 cut(s) | 359, 379 |
| BstC8I | GCNNGC | 2 cut(s) | 319, 1128 |
| BstDEI | CTNAG | 3 cut(s) | 34, 405, 653 |
| BstDSI | CCRYGG | 1 cut(s) | 119 |
| BstEII | GGTNACC | 1 cut(s) | 1166 |
| BstF5I | GGATG | 3 cut(s) | 781, 1243, 1347 |
| BstFNI | CGCG | 3 cut(s) | 450, 478, 529 |
| BstH2I | RGCGCY | 2 cut(s) | 362, 382 |
| BstHHI | GCGC | 4 cut(s) | 361, 381, 480, 531 |
| BstKTI | GATC | 3 cut(s) | 224, 286, 865 |
| BstMAI | GTCTC | 3 cut(s) | 1047, 1088, 1215 |
| BstMBI | GATC | 3 cut(s) | 221, 283, 862 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 53, 248, 257, 387, 508, 517, 526 |
| BstNI | CCWGG | 4 cut(s) | 688, 908, 1058, 1350 |
| BstNSI | RCATGY | 2 cut(s) | 634, 1399 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 430 |
| BstPI | GGTNACC | 1 cut(s) | 1166 |
| BstSCI | CCNGG | 6 cut(s) | 106, 224, 686, 906, 1056, 1348 |
| BstSFI | CTRYAG | 2 cut(s) | 249, 312 |
| BstSLI | GKGCMC | 1 cut(s) | 1349 |
| BstUI | CGCG | 3 cut(s) | 450, 478, 529 |
| BstV1I | GCAGC | 3 cut(s) | 220, 326, 1302 |
| BstX2I | RGATCY | 2 cut(s) | 221, 862 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 194 |
| BstYI | RGATCY | 2 cut(s) | 221, 862 |
| BsuI | GTATCC | 2 cut(s) | 675, 925 |
| BsuRI | GGCC | 6 cut(s) | 22, 124, 229, 387, 734, 1359 |
| BtgI | CCRYGG | 1 cut(s) | 119 |
| BtsCI | GGATG | 3 cut(s) | 781, 1243, 1347 |
| BtsIMutI | CAGTG | 1 cut(s) | 402 |
| Cac8I | GCNNGC | 2 cut(s) | 319, 1128 |
| CciI | TCATGA | 2 cut(s) | 760, 1086 |
| CfoI | GCGC | 4 cut(s) | 361, 381, 480, 531 |
| Cfr10I | RCCGGY | 1 cut(s) | 502 |
| Cfr13I | GGNCC | 4 cut(s) | 110, 152, 197, 1489 |
| CseI | GACGC | 1 cut(s) | 1088 |
| Csp6I | GTAC | 4 cut(s) | 325, 442, 574, 715 |
| CviQI | GTAC | 4 cut(s) | 325, 442, 574, 715 |
| DdeI | CTNAG | 3 cut(s) | 34, 405, 653 |
| DinI | GGCGCC | 2 cut(s) | 360, 380 |
| DpnI | GATC | 3 cut(s) | 223, 285, 864 |
| DpnII | GATC | 3 cut(s) | 221, 283, 862 |
| EaeI | YGGCCR | 1 cut(s) | 227 |
| Eam1104I | CTCTTC | 2 cut(s) | 416, 1002 |
| EarI | CTCTTC | 2 cut(s) | 416, 1002 |
| Ecl136II | GAGCTC | 1 cut(s) | 409 |
| Eco130I | CCWWGG | 4 cut(s) | 119, 382, 1360, 1514 |
| Eco147I | AGGCCT | 1 cut(s) | 734 |
| Eco24I | GRGCYC | 1 cut(s) | 411 |
| Eco31I | GGTCTC | 2 cut(s) | 1047, 1215 |
| Eco47I | GGWCC | 4 cut(s) | 110, 152, 197, 1489 |
| Eco53kI | GAGCTC | 1 cut(s) | 409 |
| Eco57I | CTGAAG | 3 cut(s) | 397, 562, 713 |
| Eco88I | CYCGRG | 1 cut(s) | 1188 |
| Eco91I | GGTNACC | 1 cut(s) | 1166 |
| EcoICRI | GAGCTC | 1 cut(s) | 409 |
| EcoO109I | RGGNCCY | 2 cut(s) | 110, 1489 |
| EcoO65I | GGTNACC | 1 cut(s) | 1166 |
| EcoRII | CCWGG | 4 cut(s) | 686, 906, 1056, 1348 |
| EcoT14I | CCWWGG | 4 cut(s) | 119, 382, 1360, 1514 |
| EcoT38I | GRGCYC | 1 cut(s) | 411 |
| EgeI | GGCGCC | 2 cut(s) | 360, 380 |
| EheI | GGCGCC | 2 cut(s) | 360, 380 |
| ErhI | CCWWGG | 4 cut(s) | 119, 382, 1360, 1514 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 560, 592 |
| FaqI | GGGAC | 4 cut(s) | 689, 1198, 1314, 1475 |
| FbaI | TGATCA | 1 cut(s) | 283 |
| FblI | GTMKAC | 1 cut(s) | 1475 |
| Fnu4HI | GCNGC | 4 cut(s) | 209, 315, 388, 1316 |
| FokI | GGATG | 3 cut(s) | 788, 1250, 1354 |
| FriOI | GRGCYC | 1 cut(s) | 411 |
| Fsp4HI | GCNGC | 4 cut(s) | 209, 315, 388, 1316 |
| FspBI | CTAG | 7 cut(s) | 44, 428, 884, 1139, 1361, 1439, 1515 |
| GlaI | GCGC | 4 cut(s) | 360, 380, 479, 530 |
| GluI | GCNGC | 4 cut(s) | 209, 315, 388, 1316 |
| HaeII | RGCGCY | 2 cut(s) | 362, 382 |
| HaeIII | GGCC | 6 cut(s) | 22, 124, 229, 387, 734, 1359 |
| HapII | CCGG | 5 cut(s) | 107, 226, 503, 860, 921 |
| HgaI | GACGC | 1 cut(s) | 1088 |
| HhaI | GCGC | 4 cut(s) | 361, 381, 480, 531 |
| Hin1I | GRCGYC | 2 cut(s) | 359, 379 |
| Hin6I | GCGC | 4 cut(s) | 359, 379, 478, 529 |
| HinP1I | GCGC | 4 cut(s) | 359, 379, 478, 529 |
| HinfI | GANTC | 6 cut(s) | 431, 460, 900, 1186, 1365, 1375 |
| HpaII | CCGG | 5 cut(s) | 107, 226, 503, 860, 921 |
| HphI | GGTGA | 4 cut(s) | 155, 380, 559, 895 |
| Hpy166II | GTNNAC | 2 cut(s) | 832, 1476 |
| Hpy188I | TCNGA | 5 cut(s) | 221, 273, 597, 967, 1485 |
| Hpy188III | TCNNGA | 9 cut(s) | 300, 626, 761, 773, 860, 866, 1087, 1259, 1332 |
| Hpy8I | GTNNAC | 2 cut(s) | 832, 1476 |
| HpyAV | CCTTC | 8 cut(s) | 68, 182, 724, 814, 1157, 1291, 1329, 1480 |
| HpyCH4III | ACNGT | 3 cut(s) | 368, 547, 890 |
| HpyCH4IV | ACGT | 3 cut(s) | 536, 935, 1158 |
| HpyCH4V | TGCA | 8 cut(s) | 208, 251, 314, 709, 941, 1155, 1241, 1502 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 53, 248, 257, 387, 508, 517, 526 |
| HpyF3I | CTNAG | 3 cut(s) | 34, 405, 653 |
| HpySE526I | ACGT | 3 cut(s) | 536, 935, 1158 |
| Hsp92I | GRCGYC | 2 cut(s) | 359, 379 |
| HspAI | GCGC | 4 cut(s) | 359, 379, 478, 529 |
| KasI | GGCGCC | 2 cut(s) | 358, 378 |
| Kpn2I | TCCGGA | 1 cut(s) | 859 |
| Ksp22I | TGATCA | 1 cut(s) | 283 |
| Kzo9I | GATC | 3 cut(s) | 221, 283, 862 |
| LguI | GCTCTTC | 2 cut(s) | 416, 1002 |
| LmnI | GCTCC | 4 cut(s) | 4, 1209, 1510, 1524 |
| Lsp1109I | GCAGC | 3 cut(s) | 220, 326, 1302 |
| LweI | GCATC | 1 cut(s) | 1228 |
| MaeI | CTAG | 7 cut(s) | 44, 428, 884, 1139, 1361, 1439, 1515 |
| MaeII | ACGT | 3 cut(s) | 536, 935, 1158 |
| MaeIII | GTNAC | 5 cut(s) | 349, 368, 607, 1166, 1398 |
| MalI | GATC | 3 cut(s) | 223, 285, 864 |
| MboI | GATC | 3 cut(s) | 221, 283, 862 |
| MboII | GAAGA | 6 cut(s) | 403, 751, 1019, 1058, 1160, 1454 |
| MflI | RGATCY | 2 cut(s) | 221, 862 |
| MhlI | GDGCHC | 4 cut(s) | 411, 545, 783, 1349 |
| MluCI | AATT | 4 cut(s) | 266, 946, 1023, 1418 |
| Mly113I | GGCGCC | 2 cut(s) | 359, 379 |
| MlyI | GAGTC | 3 cut(s) | 440, 1180, 1359 |
| MroI | TCCGGA | 1 cut(s) | 859 |
| MseI | TTAA | 5 cut(s) | 513, 873, 914, 1254, 1448 |
| MslI | CAYNNNNRTG | 1 cut(s) | 285 |
| MspA1I | CMGCKG | 1 cut(s) | 317 |
| MspI | CCGG | 5 cut(s) | 107, 226, 503, 860, 921 |
| MspR9I | CCNGG | 6 cut(s) | 108, 226, 688, 908, 1058, 1350 |
| MvaI | CCWGG | 4 cut(s) | 688, 908, 1058, 1350 |
| MvnI | CGCG | 3 cut(s) | 450, 478, 529 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 53, 248, 257, 387, 508, 517, 526 |
| NarI | GGCGCC | 2 cut(s) | 359, 379 |
| NciI | CCSGG | 2 cut(s) | 108, 226 |
| NcoI | CCATGG | 1 cut(s) | 119 |
| NdeII | GATC | 3 cut(s) | 221, 283, 862 |
| NlaIV | GGNNCC | 7 cut(s) | 111, 223, 360, 380, 1491, 1512, 1520 |
| NmuCI | GTSAC | 3 cut(s) | 349, 368, 607 |
| NspI | RCATGY | 2 cut(s) | 634, 1399 |
| PaeR7I | CTCGAG | 1 cut(s) | 1188 |
| PagI | TCATGA | 2 cut(s) | 760, 1086 |
| PceI | AGGCCT | 1 cut(s) | 734 |
| PciI | ACATGT | 2 cut(s) | 630, 1395 |
| PciSI | GCTCTTC | 2 cut(s) | 416, 1002 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 533 |
| PfeI | GAWTC | 3 cut(s) | 460, 900, 1375 |
| PflFI | GACNNNGTC | 1 cut(s) | 890 |
| PkrI | GCNGC | 4 cut(s) | 210, 316, 389, 1317 |
| PleI | GAGTC | 3 cut(s) | 439, 1180, 1359 |
| PluTI | GGCGCC | 2 cut(s) | 362, 382 |
| PpsI | GAGTC | 3 cut(s) | 439, 1180, 1359 |
| PpuMI | RGGWCCY | 2 cut(s) | 110, 1489 |
| PscI | ACATGT | 2 cut(s) | 630, 1395 |
| PshAI | GACNNNNGTC | 1 cut(s) | 430 |
| Psp124BI | GAGCTC | 1 cut(s) | 411 |
| Psp1406I | AACGTT | 1 cut(s) | 536 |
| Psp5II | RGGWCCY | 2 cut(s) | 110, 1489 |
| Psp6I | CCWGG | 4 cut(s) | 686, 906, 1056, 1348 |
| PspEI | GGTNACC | 1 cut(s) | 1166 |
| PspGI | CCWGG | 4 cut(s) | 686, 906, 1056, 1348 |
| PspN4I | GGNNCC | 7 cut(s) | 111, 223, 360, 380, 1491, 1512, 1520 |
| PspPI | GGNCC | 4 cut(s) | 110, 152, 197, 1489 |
| PspPPI | RGGWCCY | 2 cut(s) | 110, 1489 |
| PspXI | VCTCGAGB | 1 cut(s) | 1188 |
| PstI | CTGCAG | 2 cut(s) | 253, 316 |
| PsuI | RGATCY | 2 cut(s) | 221, 862 |
| PsyI | GACNNNGTC | 1 cut(s) | 890 |
| PvuII | CAGCTG | 1 cut(s) | 317 |
| RsaI | GTAC | 4 cut(s) | 326, 443, 575, 716 |
| RsaNI | GTAC | 4 cut(s) | 325, 442, 574, 715 |
| RseI | CAYNNNNRTG | 1 cut(s) | 285 |
| SacI | GAGCTC | 1 cut(s) | 411 |
| SapI | GCTCTTC | 2 cut(s) | 416, 1002 |
| SaqAI | TTAA | 5 cut(s) | 513, 873, 914, 1254, 1448 |
| SatI | GCNGC | 4 cut(s) | 209, 315, 388, 1316 |
| Sau3AI | GATC | 3 cut(s) | 221, 283, 862 |
| Sau96I | GGNCC | 4 cut(s) | 110, 152, 197, 1489 |
| ScaI | AGTACT | 1 cut(s) | 575 |
| SchI | GAGTC | 3 cut(s) | 440, 1180, 1359 |
| ScrFI | CCNGG | 6 cut(s) | 108, 226, 688, 908, 1058, 1350 |
| SduI | GDGCHC | 4 cut(s) | 411, 545, 783, 1349 |
| SfaNI | GCATC | 1 cut(s) | 1228 |
| SfcI | CTRYAG | 2 cut(s) | 249, 312 |
| SfoI | GGCGCC | 2 cut(s) | 360, 380 |
| Sfr274I | CTCGAG | 1 cut(s) | 1188 |
| SinI | GGWCC | 4 cut(s) | 110, 152, 197, 1489 |
| SlaI | CTCGAG | 1 cut(s) | 1188 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 285 |
| SmlI | CTYRAG | 2 cut(s) | 212, 1188 |
| SmoI | CTYRAG | 2 cut(s) | 212, 1188 |
| Sse9I | AATT | 4 cut(s) | 266, 946, 1023, 1418 |
| SseBI | AGGCCT | 1 cut(s) | 734 |
| SsiI | CCGC | 1 cut(s) | 388 |
| SspDI | GGCGCC | 2 cut(s) | 358, 378 |
| SspMI | CTAG | 7 cut(s) | 44, 428, 884, 1139, 1361, 1439, 1515 |
| SstI | GAGCTC | 1 cut(s) | 411 |
| StuI | AGGCCT | 1 cut(s) | 734 |
| StyD4I | CCNGG | 6 cut(s) | 106, 224, 686, 906, 1056, 1348 |
| StyI | CCWWGG | 4 cut(s) | 119, 382, 1360, 1514 |
| TaaI | ACNGT | 3 cut(s) | 368, 547, 890 |
| TaiI | ACGT | 3 cut(s) | 539, 938, 1161 |
| TaqI | TCGA | 3 cut(s) | 419, 438, 1189 |
| TasI | AATT | 4 cut(s) | 266, 946, 1023, 1418 |
| TatI | WGTACW | 2 cut(s) | 441, 573 |
| TauI | GCSGC | 1 cut(s) | 390 |
| TfiI | GAWTC | 3 cut(s) | 460, 900, 1375 |
| Tru1I | TTAA | 5 cut(s) | 513, 873, 914, 1254, 1448 |
| Tru9I | TTAA | 5 cut(s) | 513, 873, 914, 1254, 1448 |
| TscAI | CASTG | 1 cut(s) | 409 |
| TseFI | GTSAC | 3 cut(s) | 349, 368, 607 |
| TseI | GCWGC | 3 cut(s) | 208, 314, 1315 |
| Tsp45I | GTSAC | 3 cut(s) | 349, 368, 607 |
| TspDTI | ATGAA | 5 cut(s) | 388, 743, 749, 1103, 1448 |
| TspGWI | ACGGA | 1 cut(s) | 944 |
| TspRI | CASTG | 1 cut(s) | 409 |
| Tth111I | GACNNNGTC | 1 cut(s) | 890 |
| VpaK11BI | GGWCC | 4 cut(s) | 110, 152, 197, 1489 |
| XapI | RAATTY | 1 cut(s) | 946 |
| XceI | RCATGY | 2 cut(s) | 634, 1399 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 314 |
| XhoI | CTCGAG | 1 cut(s) | 1188 |
| XmaJI | CCTAGG | 2 cut(s) | 1360, 1514 |
| XmiI | GTMKAC | 1 cut(s) | 1475 |
| XspI | CTAG | 7 cut(s) | 44, 428, 884, 1139, 1361, 1439, 1515 |
| ZrmI | AGTACT | 1 cut(s) | 575 |