Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000606

Physical Location & Seq

Genomic Coordinates Forward (+)

15352956 .. 15355705

Gene Structure 2750 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG162400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGAGCTCATTCACCCTAGAGGTGAACCTAAGAATTGTTTCTATAAATATACCTGCAAAAACTTCAAGTCCCTCATCACCTGCACTCCACATTACTAAAATGGAGCTGGTTTCCACTTGGCCCGTTCTAACCTTGGTCTGTCTAGCAACTCTAACCCTTCTCTCCAAACTTTTCTTTTCCCAAAGCCGAAAACTGAAATCTCCACCCGGTCCTAAACCATGGCCTATTATCGGCAACCTAAACCTCATGGGTCCAATCCCTCACCAAAGCCTTCACAAACTCTCCCAAACTTATGGACCAATAATGCAGCTCAAGTTCGGATCCCGCCCAGTTGTCATTGCTTCCTCTGCAGAAATGGCAAAGCAATTTCTCAAAACACATGATCATGTCTTTGCCTCTAGACCCCAAACTGCAGCTGGCAAGTACCTCACTTACAACTACCTCGACGTCACTTGGGCGCCTTACGGTGACTATTGGCGCCAAGGCCGCAAGATTTTCATCACCGAGCTCTTCAGCTCGAAAAGACTGGAGTCTTTCGAGTACATTCGAGTTGAAGAGATACGCGCTTTTGTATCGCGCCTCTGTGCCTTGTCAGGGAAGCCGGTTATGCTTAAAGAGCATATCTCTCGCCTAATGCTAAGTACAGTGAGTAGGATTGTGTTGGGAAAGGATTACTTCAGCCAAACTGATATTCAGACCTCGGTTGTGACGCTCAAAATGTTTCAGGACATGTTAGATGAGTTGGTGTCGCTTAGCGGGGTTTTGAATATAGGGGACTGGATACCATGGCTGGAGTTTTTGGACTTGCAAGGGTACGTGAAGCAAATGAAGGGATTGAAGAAAAAACTGGACAGCTTTCATGATTATATTCTGGATGAACACAAGGCAAAGATGGGAGGAGTGCAGGATTTTGTGCCGAAGGACATGGTGGACTTATTGTTGAAGCTGGTTGATAATCCGGATCTTGAAGTTAGGCTCACACTAGACGGTGTCAAGGGATTCACCCAGGATTTAATAGCCGGAGGAACGGATACATCTGCAACGAATTTGGAGTGGGCAATGTCTGAACTCATAAAACAACCACACCTCATTAGAAAGGCAACCGAAGAGCTTGACAGAGTAATTGGGAGAGAGAGATGGGTGGAAGAAAAAGACTTGGAACACCTCCCCTACATAGATGCAATCATGAAAGAGACAATGAGGAAGCACCCTGTTGTTTCAATGCTTGCACCACATCTAGCCCTTGAAGATTGCAACGTGGAAGGTTACCATATTCGTAAAGGGACTAGAGTGTTCGTAAATACATGGAGCATAGGGAGAGACCCTTTATTATGGGATGCACCAGAGGAGTTTAATCCAGAGAGATTTGTATTGGGAAGTAAGGGGATTGACGTGAAGGGACAAAGTTTTGAGCTGCTTCCATTTGGTTCAGGAAGGAGGATGTGCCCTGGTTATGGCCTAGGACTCAAAATGATTCGGTGTAGCTTGGCTAACATGTTACATGGGTTCAACTGGAAATTACCTGAGAATATGAAACCAGAAGATTTAAGCATGGAGGAAGTTTCTGGGTTGTCAACACCTCGGAAGGTCCCACTTGTTGCAGTTGGGGAGCCTAGGCTCCCGATCCATCTCTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0032870 GO:0033554 GO:0034599 GO:0034614 GO:0035690 GO:0042221 GO:0042493 GO:0044550 GO:0050896 GO:0051716 GO:0055114 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071731 GO:0071732 GO:0097366 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

ko00905 ko01100 ko01110 map00905 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

545

Amino Acids

61.78

Weight (kDa)

8.68

Isoelectric Point (pI)

40.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	68 - 527	1.2e-100	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000606)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g08780 FvH4_1g08790 FvH4_1g08830 FvH4_6g25820
malus_domestica	MD02G1092100.v1.1 MD02G1092500.v1.1 MD02G1093200.v1.1 MD15G1218600.v1.1
prunus_persica	Prupe.7G197500_v2.0.a1 Prupe.7G197700_v2.0.a1 Prupe.7G197900_v2.0.a1 Prupe.7G198000_v2.0.a1 Prupe.7G198100_v2.0.a1 Prupe.7G198300_v2.0.a1
pyrus_communis	pycom02g07340 pycom15g19370
rosa_chinensis	RchiOBHm_Chr2g0094941 RchiOBHm_Chr2g0094971 RchiOBHm_Chr2g0095051 RchiOBHm_Chr2g0095221 RchiOBHm_Chr2g0095231 RchiOBHm_Chr2g0095261 RchiOBHm_Chr2g0103351 RchiOBHm_Chr2g0104551 RchiOBHm_Chr6g0297411
rosa_laevigata	RLG00000016533 RLG00000016545 RLG00000016547 RLG00000016548 RLG00000017226
rosa_multiflora	Rmu_sc0001555.1_g000008 Rmu_sc0003274.1_g000003 Rmu_sc0004316.1_g000013 Rmu_ssc0000183.1_g000015 Rmu_ssc0000183.1_g000017 Rmu_ssc0000183.1_g000023
rosa_roxburghii	Rroxscaffold_2G00116650 Rroxscaffold_2G00139710 Rroxscaffold_2G00146510 Rroxscaffold_2G00146530 Rroxscaffold_2G00146690 Rroxscaffold_2G00146750 Rroxscaffold_3G00256890 Rroxscaffold_4G00297070 Rroxscaffold_4G00303160 Rroxscaffold_5G00374070 Rroxscaffold_6G00419510 Rroxscaffold_7G00186670 Rroxscaffold_7G00198970
rosa_rugosa	Rorug01G0110700 Rorug02G0048900 Rorug02G0048900 Rorug02G0114200
rosa_samantha	Rh1BG006000 Rh2AG162400 Rh2AG171200 Rh2BG096800 Rh2BG098400 Rh2CG098700 Rh2CG098900 Rh2CG100200 Rh2CG100400 Rh2CG169600 Rh2DG095400 Rh2DG095500 Rh2DG095600 Rh2DG098000 Rh2DG098100 Rh2DG168400 Rh4DG392900 Rh5DG019100 Rh5DG019200 Rh5DG460500 Rh6AG073600 Rh7DG484100
rosa_wichuraiana	Rw2G007210 Rw2G007290 Rw2G007310 Rw2G007330 Rw2G012760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	88
AatII	GACGTC	1 cut(s)	450
Acc36I	ACCTGC	2 cut(s)	61, 88
AccB1I	GGYRCC	2 cut(s)	457, 477
AccII	CGCG	2 cut(s)	564, 577
AccIII	TCCGGA	1 cut(s)	958
AciI	CCGC	3 cut(s)	325, 487, 756
AclWI	GGATC	4 cut(s)	315, 328, 969, 1618
AcsI	RAATTY	1 cut(s)	1045
AcuI	CTGAAG	2 cut(s)	496, 661
AcyI	GRCGYC	3 cut(s)	447, 458, 478
AfaI	GTAC	4 cut(s)	425, 542, 643, 815
AfiI	CCNNNNNNNGG	3 cut(s)	230, 594, 1454
AflIII	ACRYGT	2 cut(s)	729, 1494
AgsI	TTSAA	9 cut(s)	66, 554, 766, 838, 943, 968, 1221, 1247, 1510
AjiI	CACGTC	1 cut(s)	1393
AjnI	CCWGG	2 cut(s)	1005, 1447
AjuI	GAANNNNNNNTTGG	2 cut(s)	675, 707
Alw21I	GWGCWC	2 cut(s)	8, 510
Alw26I	GTCTC	2 cut(s)	1187, 1314
AlwI	GGATC	4 cut(s)	315, 328, 969, 1618
Aor13HI	TCCGGA	1 cut(s)	958
AoxI	GGCC	4 cut(s)	119, 221, 484, 1456
ApeKI	GCWGC	3 cut(s)	307, 413, 1414
ApoI	RAATTY	1 cut(s)	1045
Asp700I	GAANNNNTTC	1 cut(s)	37
AspA2I	CCTAGG	2 cut(s)	1459, 1613
AspLEI	GCGC	4 cut(s)	460, 480, 566, 579
AspS9I	GGNCC	5 cut(s)	120, 209, 251, 296, 1588
AsuC2I	CCSGG	1 cut(s)	207
AsuHPI	GGTGA	7 cut(s)	4, 34, 69, 254, 479, 493, 994
AvaII	GGWCC	4 cut(s)	209, 251, 296, 1588
AvrII	CCTAGG	2 cut(s)	1459, 1613
BaeGI	GKGCMC	1 cut(s)	1448
BamHI	GGATCC	1 cut(s)	320
BanI	GGYRCC	2 cut(s)	457, 477
BanII	GRGCYC	2 cut(s)	8, 510
Bbv12I	GWGCWC	2 cut(s)	8, 510
BbvI	GCAGC	3 cut(s)	319, 425, 1401
BccI	CCATC	3 cut(s)	886, 1131, 1635
BcgI	CGANNNNNNTGC	2 cut(s)	608, 642
BciT130I	CCWGG	2 cut(s)	1007, 1449
BciVI	GTATCC	2 cut(s)	774, 1024
BclI	TGATCA	1 cut(s)	382
BcnI	CCSGG	1 cut(s)	207
BcoDI	GTCTC	2 cut(s)	1187, 1314
BfaI	CTAG	8 cut(s)	17, 143, 399, 983, 1238, 1287, 1460, 1614
BfmI	CTRYAG	2 cut(s)	348, 411
BfoI	RGCGCY	2 cut(s)	461, 481
BfuAI	ACCTGC	2 cut(s)	61, 88
BfuI	GTATCC	2 cut(s)	774, 1024
BisI	GCNGC	4 cut(s)	308, 414, 487, 1415
BlnI	CCTAGG	2 cut(s)	1459, 1613
BlpI	GCTNAGC	1 cut(s)	752
BlsI	GCNGC	4 cut(s)	309, 415, 488, 1416
Bme1390I	CCNGG	3 cut(s)	207, 1007, 1449
Bme18I	GGWCC	4 cut(s)	209, 251, 296, 1588
BmgBI	CACGTC	1 cut(s)	1393
BmgT120I	GGNCC	5 cut(s)	120, 209, 251, 296, 1588
BmiI	GGNNCC	7 cut(s)	252, 322, 459, 479, 1590, 1611, 1619
BmrFI	CCNGG	3 cut(s)	207, 1007, 1449
BmrI	ACTGGG	1 cut(s)	323
BmsI	GCATC	2 cut(s)	1168, 1327
BmuI	ACTGGG	1 cut(s)	323
BoxI	GACNNNNGTC	1 cut(s)	529
BplI	GAGNNNNNCTC	2 cut(s)	608, 640
BpmI	CTGGAG	2 cut(s)	548, 812
Bpu1102I	GCTNAGC	1 cut(s)	752
BpuEI	CTTGAG	1 cut(s)	296
BpuMI	CCSGG	1 cut(s)	207
BsaAI	YACGTR	1 cut(s)	817
BsaBI	GATNNNNATC	1 cut(s)	497
BsaHI	GRCGYC	3 cut(s)	447, 458, 478
BsaI	GGTCTC	1 cut(s)	1314
BsaWI	WCCGGW	1 cut(s)	958
BsaXI	ACNNNNNCTCC	4 cut(s)	69, 99, 266, 296
Bsc4I	CCNNNNNNNGG	3 cut(s)	230, 594, 1454
Bse118I	RCCGGY	1 cut(s)	601
Bse1I	ACTGG	5 cut(s)	329, 531, 782, 852, 1517
Bse3DI	GCAATG	2 cut(s)	336, 1065
Bse8I	GATNNNNATC	1 cut(s)	497
BseAI	TCCGGA	1 cut(s)	958
BseBI	CCWGG	2 cut(s)	1007, 1449
BseGI	GGATG	3 cut(s)	880, 1342, 1446
BseJI	GATNNNNATC	1 cut(s)	497
BseLI	CCNNNNNNNGG	3 cut(s)	230, 594, 1454
BseMI	GCAATG	2 cut(s)	336, 1065
BseMII	CTCAG	1 cut(s)	1515
BseNI	ACTGG	5 cut(s)	329, 531, 782, 852, 1517
BseRI	GAGGAG	2 cut(s)	912, 1361
BseSI	GKGCMC	1 cut(s)	1448
BseXI	GCAGC	3 cut(s)	319, 425, 1401
BsgI	GTGCAG	2 cut(s)	66, 923
Bsh1236I	CGCG	2 cut(s)	564, 577
BshFI	GGCC	4 cut(s)	121, 223, 486, 1458
BshNI	GGYRCC	2 cut(s)	457, 477
BsiHKAI	GWGCWC	2 cut(s)	8, 510
BsiSI	CCGG	4 cut(s)	207, 602, 959, 1020
BslFI	GGGAC	5 cut(s)	54, 788, 1297, 1413, 1574
BslI	CCNNNNNNNGG	3 cut(s)	230, 594, 1454
BsmAI	GTCTC	2 cut(s)	1187, 1314
BsmFI	GGGAC	5 cut(s)	54, 788, 1297, 1413, 1574
BsnI	GGCC	4 cut(s)	121, 223, 486, 1458
Bso31I	GGTCTC	1 cut(s)	1314
Bsp1286I	GDGCHC	3 cut(s)	8, 510, 1448
Bsp13I	TCCGGA	1 cut(s)	958
Bsp143I	GATC	4 cut(s)	320, 382, 961, 1623
Bsp1720I	GCTNAGC	1 cut(s)	752
Bsp19I	CCATGG	2 cut(s)	218, 785
BspACI	CCGC	3 cut(s)	325, 487, 756
BspANI	GGCC	4 cut(s)	121, 223, 486, 1458
BspCNI	CTCAG	1 cut(s)	1516
BspEI	TCCGGA	1 cut(s)	958
BspFNI	CGCG	2 cut(s)	564, 577
BspHI	TCATGA	2 cut(s)	859, 1185
BspLI	GGNNCC	7 cut(s)	252, 322, 459, 479, 1590, 1611, 1619
BspMAI	CTGCAG	2 cut(s)	352, 415
BspMI	ACCTGC	2 cut(s)	61, 88
BspPI	GGATC	4 cut(s)	315, 328, 969, 1618
BspQI	GCTCTTC	2 cut(s)	515, 1101
BspT107I	GGYRCC	2 cut(s)	457, 477
BspTNI	GGTCTC	1 cut(s)	1314
BsrDI	GCAATG	2 cut(s)	336, 1065
BsrFI	RCCGGY	1 cut(s)	601
BsrI	ACTGG	5 cut(s)	329, 531, 782, 852, 1517
BssAI	RCCGGY	1 cut(s)	601
BssMI	GATC	4 cut(s)	320, 382, 961, 1623
BssNI	GRCGYC	3 cut(s)	447, 458, 478
BssT1I	CCWWGG	6 cut(s)	132, 218, 481, 785, 1459, 1613
Bst2UI	CCWGG	2 cut(s)	1007, 1449
Bst4CI	ACNGT	3 cut(s)	467, 646, 989
Bst6I	CTCTTC	3 cut(s)	515, 549, 1101
BstACI	GRCGYC	3 cut(s)	447, 458, 478
BstBAI	YACGTR	1 cut(s)	817
BstC8I	GCNNGC	2 cut(s)	418, 1227
BstDEI	CTNAG	4 cut(s)	29, 638, 752, 1524
BstDSI	CCRYGG	2 cut(s)	218, 785
BstEII	GGTNACC	1 cut(s)	1265
BstF5I	GGATG	3 cut(s)	880, 1342, 1446
BstFNI	CGCG	2 cut(s)	564, 577
BstH2I	RGCGCY	2 cut(s)	461, 481
BstHHI	GCGC	4 cut(s)	460, 480, 566, 579
BstKTI	GATC	4 cut(s)	323, 385, 964, 1626
BstMAI	GTCTC	2 cut(s)	1187, 1314
BstMBI	GATC	4 cut(s)	320, 382, 961, 1623
BstMWI	GCNNNNNNNGC	5 cut(s)	347, 356, 486, 607, 616
BstNI	CCWGG	2 cut(s)	1007, 1449
BstNSI	RCATGY	2 cut(s)	733, 1498
BstPAI	GACNNNNGTC	1 cut(s)	529
BstPI	GGTNACC	1 cut(s)	1265
BstSCI	CCNGG	3 cut(s)	205, 1005, 1447
BstSFI	CTRYAG	2 cut(s)	348, 411
BstSLI	GKGCMC	1 cut(s)	1448
BstUI	CGCG	2 cut(s)	564, 577
BstV1I	GCAGC	3 cut(s)	319, 425, 1401
BstX2I	RGATCY	2 cut(s)	320, 961
BstXI	CCANNNNNNTGG	1 cut(s)	293
BstYI	RGATCY	2 cut(s)	320, 961
BsuI	GTATCC	2 cut(s)	774, 1024
BsuRI	GGCC	4 cut(s)	121, 223, 486, 1458
BtgI	CCRYGG	2 cut(s)	218, 785
BtrI	CACGTC	1 cut(s)	1393
BtsCI	GGATG	3 cut(s)	880, 1342, 1446
BtsIMutI	CAGTG	1 cut(s)	651
BveI	ACCTGC	2 cut(s)	61, 88
Cac8I	GCNNGC	2 cut(s)	418, 1227
CciI	TCATGA	2 cut(s)	859, 1185
CfoI	GCGC	4 cut(s)	460, 480, 566, 579
Cfr10I	RCCGGY	1 cut(s)	601
Cfr13I	GGNCC	5 cut(s)	120, 209, 251, 296, 1588
CseI	GACGC	1 cut(s)	718
Csp6I	GTAC	4 cut(s)	424, 541, 642, 814
CviQI	GTAC	4 cut(s)	424, 541, 642, 814
DdeI	CTNAG	4 cut(s)	29, 638, 752, 1524
DinI	GGCGCC	2 cut(s)	459, 479
DpnI	GATC	4 cut(s)	322, 384, 963, 1625
DpnII	GATC	4 cut(s)	320, 382, 961, 1623
Eam1104I	CTCTTC	3 cut(s)	515, 549, 1101
EarI	CTCTTC	3 cut(s)	515, 549, 1101
Ecl136II	GAGCTC	2 cut(s)	6, 508
Eco130I	CCWWGG	6 cut(s)	132, 218, 481, 785, 1459, 1613
Eco24I	GRGCYC	2 cut(s)	8, 510
Eco31I	GGTCTC	1 cut(s)	1314
Eco47I	GGWCC	4 cut(s)	209, 251, 296, 1588
Eco53kI	GAGCTC	2 cut(s)	6, 508
Eco57I	CTGAAG	2 cut(s)	496, 661
Eco91I	GGTNACC	1 cut(s)	1265
EcoICRI	GAGCTC	2 cut(s)	6, 508
EcoO109I	RGGNCCY	1 cut(s)	1588
EcoO65I	GGTNACC	1 cut(s)	1265
EcoRII	CCWGG	2 cut(s)	1005, 1447
EcoT14I	CCWWGG	6 cut(s)	132, 218, 481, 785, 1459, 1613
EcoT38I	GRGCYC	2 cut(s)	8, 510
EgeI	GGCGCC	2 cut(s)	459, 479
EheI	GGCGCC	2 cut(s)	459, 479
ErhI	CCWWGG	6 cut(s)	132, 218, 481, 785, 1459, 1613
FalI	AAGNNNNNCTT	2 cut(s)	659, 691
FaqI	GGGAC	5 cut(s)	54, 788, 1297, 1413, 1574
FauI	CCCGC	2 cut(s)	332, 749
FbaI	TGATCA	1 cut(s)	382
Fnu4HI	GCNGC	4 cut(s)	308, 414, 487, 1415
FokI	GGATG	3 cut(s)	887, 1349, 1453
FriOI	GRGCYC	2 cut(s)	8, 510
Fsp4HI	GCNGC	4 cut(s)	308, 414, 487, 1415
FspBI	CTAG	8 cut(s)	17, 143, 399, 983, 1238, 1287, 1460, 1614
GlaI	GCGC	4 cut(s)	459, 479, 565, 578
GluI	GCNGC	4 cut(s)	308, 414, 487, 1415
GsuI	CTGGAG	2 cut(s)	548, 812
HaeII	RGCGCY	2 cut(s)	461, 481
HaeIII	GGCC	4 cut(s)	121, 223, 486, 1458
HapII	CCGG	4 cut(s)	207, 602, 959, 1020
HgaI	GACGC	1 cut(s)	718
HhaI	GCGC	4 cut(s)	460, 480, 566, 579
Hin1I	GRCGYC	3 cut(s)	447, 458, 478
Hin6I	GCGC	4 cut(s)	458, 478, 564, 577
HinP1I	GCGC	4 cut(s)	458, 478, 564, 577
HincII	GTYRAC	1 cut(s)	1575
HindII	GTYRAC	1 cut(s)	1575
HinfI	GANTC	4 cut(s)	530, 999, 1464, 1474
HpaII	CCGG	4 cut(s)	207, 602, 959, 1020
HphI	GGTGA	7 cut(s)	4, 34, 69, 254, 479, 493, 994
Hpy166II	GTNNAC	3 cut(s)	25, 931, 1575
Hpy188I	TCNGA	4 cut(s)	320, 696, 1066, 1584
Hpy8I	GTNNAC	3 cut(s)	25, 931, 1575
Hpy99I	CGWCG	1 cut(s)	449
HpyAV	CCTTC	8 cut(s)	167, 281, 823, 913, 1256, 1390, 1428, 1579
HpyCH4III	ACNGT	3 cut(s)	467, 646, 989
HpyCH4IV	ACGT	4 cut(s)	447, 816, 1257, 1392
HpyF10VI	GCNNNNNNNGC	5 cut(s)	347, 356, 486, 607, 616
HpyF3I	CTNAG	4 cut(s)	29, 638, 752, 1524
HpySE526I	ACGT	4 cut(s)	447, 816, 1257, 1392
Hsp92I	GRCGYC	3 cut(s)	447, 458, 478
HspAI	GCGC	4 cut(s)	458, 478, 564, 577
KasI	GGCGCC	2 cut(s)	457, 477
Kpn2I	TCCGGA	1 cut(s)	958
Ksp22I	TGATCA	1 cut(s)	382
Kzo9I	GATC	4 cut(s)	320, 382, 961, 1623
LguI	GCTCTTC	2 cut(s)	515, 1101
LmnI	GCTCC	4 cut(s)	103, 1308, 1609, 1623
Lsp1109I	GCAGC	3 cut(s)	319, 425, 1401
LweI	GCATC	2 cut(s)	1168, 1327
MaeI	CTAG	8 cut(s)	17, 143, 399, 983, 1238, 1287, 1460, 1614
MaeII	ACGT	4 cut(s)	447, 816, 1257, 1392
MaeIII	GTNAC	5 cut(s)	448, 467, 706, 1265, 1497
MalI	GATC	4 cut(s)	322, 384, 963, 1625
MboI	GATC	4 cut(s)	320, 382, 961, 1623
MboII	GAAGA	7 cut(s)	502, 566, 850, 1118, 1157, 1259, 1553
MflI	RGATCY	2 cut(s)	320, 961
MhlI	GDGCHC	3 cut(s)	8, 510, 1448
MluCI	AATT	5 cut(s)	33, 365, 1045, 1122, 1517
Mly113I	GGCGCC	2 cut(s)	458, 478
MlyI	GAGTC	2 cut(s)	539, 1458
MroI	TCCGGA	1 cut(s)	958
MroXI	GAANNNNTTC	1 cut(s)	37
MseI	TTAA	4 cut(s)	612, 1013, 1353, 1547
MslI	CAYNNNNRTG	1 cut(s)	384
MspA1I	CMGCKG	1 cut(s)	416
MspI	CCGG	4 cut(s)	207, 602, 959, 1020
MspR9I	CCNGG	3 cut(s)	207, 1007, 1449
MvaI	CCWGG	2 cut(s)	1007, 1449
MvnI	CGCG	2 cut(s)	564, 577
MwoI	GCNNNNNNNGC	5 cut(s)	347, 356, 486, 607, 616
NarI	GGCGCC	2 cut(s)	458, 478
NciI	CCSGG	1 cut(s)	207
NcoI	CCATGG	2 cut(s)	218, 785
NdeII	GATC	4 cut(s)	320, 382, 961, 1623
NlaIV	GGNNCC	7 cut(s)	252, 322, 459, 479, 1590, 1611, 1619
NmuCI	GTSAC	3 cut(s)	448, 467, 706
NspI	RCATGY	2 cut(s)	733, 1498
PagI	TCATGA	2 cut(s)	859, 1185
PaqCI	CACCTGC	1 cut(s)	88
PciI	ACATGT	2 cut(s)	729, 1494
PciSI	GCTCTTC	2 cut(s)	515, 1101
PdmI	GAANNNNTTC	1 cut(s)	37
PfeI	GAWTC	2 cut(s)	999, 1474
PflFI	GACNNNGTC	1 cut(s)	989
PkrI	GCNGC	4 cut(s)	309, 415, 488, 1416
PleI	GAGTC	2 cut(s)	538, 1458
PluTI	GGCGCC	2 cut(s)	461, 481
PpsI	GAGTC	2 cut(s)	538, 1458
Ppu21I	YACGTR	1 cut(s)	817
PpuMI	RGGWCCY	1 cut(s)	1588
PscI	ACATGT	2 cut(s)	729, 1494
PshAI	GACNNNNGTC	1 cut(s)	529
Psp124BI	GAGCTC	2 cut(s)	8, 510
Psp5II	RGGWCCY	1 cut(s)	1588
Psp6I	CCWGG	2 cut(s)	1005, 1447
PspEI	GGTNACC	1 cut(s)	1265
PspGI	CCWGG	2 cut(s)	1005, 1447
PspN4I	GGNNCC	7 cut(s)	252, 322, 459, 479, 1590, 1611, 1619
PspPI	GGNCC	5 cut(s)	120, 209, 251, 296, 1588
PspPPI	RGGWCCY	1 cut(s)	1588
PstI	CTGCAG	2 cut(s)	352, 415
PsuI	RGATCY	2 cut(s)	320, 961
PsyI	GACNNNGTC	1 cut(s)	989
PvuII	CAGCTG	1 cut(s)	416
RsaI	GTAC	4 cut(s)	425, 542, 643, 815
RsaNI	GTAC	4 cut(s)	424, 541, 642, 814
RseI	CAYNNNNRTG	1 cut(s)	384
SacI	GAGCTC	2 cut(s)	8, 510
SapI	GCTCTTC	2 cut(s)	515, 1101
SaqAI	TTAA	4 cut(s)	612, 1013, 1353, 1547
SatI	GCNGC	4 cut(s)	308, 414, 487, 1415
Sau3AI	GATC	4 cut(s)	320, 382, 961, 1623
Sau96I	GGNCC	5 cut(s)	120, 209, 251, 296, 1588
SchI	GAGTC	2 cut(s)	539, 1458
ScrFI	CCNGG	3 cut(s)	207, 1007, 1449
SduI	GDGCHC	3 cut(s)	8, 510, 1448
SfaNI	GCATC	2 cut(s)	1168, 1327
SfcI	CTRYAG	2 cut(s)	348, 411
SfoI	GGCGCC	2 cut(s)	459, 479
SinI	GGWCC	4 cut(s)	209, 251, 296, 1588
SmiMI	CAYNNNNRTG	1 cut(s)	384
SmlI	CTYRAG	1 cut(s)	311
SmoI	CTYRAG	1 cut(s)	311
Sse9I	AATT	5 cut(s)	33, 365, 1045, 1122, 1517
SsiI	CCGC	3 cut(s)	325, 487, 756
SspDI	GGCGCC	2 cut(s)	457, 477
SspMI	CTAG	8 cut(s)	17, 143, 399, 983, 1238, 1287, 1460, 1614
SstI	GAGCTC	2 cut(s)	8, 510
StyD4I	CCNGG	3 cut(s)	205, 1005, 1447
StyI	CCWWGG	6 cut(s)	132, 218, 481, 785, 1459, 1613
TaaI	ACNGT	3 cut(s)	467, 646, 989
TaiI	ACGT	4 cut(s)	450, 819, 1260, 1395
TaqI	TCGA	4 cut(s)	444, 518, 537, 547
TasI	AATT	5 cut(s)	33, 365, 1045, 1122, 1517
TatI	WGTACW	2 cut(s)	540, 641
TauI	GCSGC	1 cut(s)	489
TfiI	GAWTC	2 cut(s)	999, 1474
Tru1I	TTAA	4 cut(s)	612, 1013, 1353, 1547
Tru9I	TTAA	4 cut(s)	612, 1013, 1353, 1547
TscAI	CASTG	1 cut(s)	651
TseFI	GTSAC	3 cut(s)	448, 467, 706
TseI	GCWGC	3 cut(s)	307, 413, 1414
Tsp45I	GTSAC	3 cut(s)	448, 467, 706
TspDTI	ATGAA	6 cut(s)	487, 842, 848, 891, 1202, 1547
TspGWI	ACGGA	1 cut(s)	1043
TspRI	CASTG	1 cut(s)	651
Tth111I	GACNNNGTC	1 cut(s)	989
VpaK11BI	GGWCC	4 cut(s)	209, 251, 296, 1588
XapI	RAATTY	1 cut(s)	1045
XbaI	TCTAGA	1 cut(s)	398
XceI	RCATGY	2 cut(s)	733, 1498
XcmI	CCANNNNNNNNNTGG	1 cut(s)	413
XmaJI	CCTAGG	2 cut(s)	1459, 1613
XmnI	GAANNNNTTC	1 cut(s)	37
XspI	CTAG	8 cut(s)	17, 143, 399, 983, 1238, 1287, 1460, 1614
ZraI	GACGTC	1 cut(s)	448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.