Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0172631 |
| rosa_laevigata | RLG00000007461 RLG00000007464 RLG00000016814 RLG00000022123 RLG00000022127 RLG00000022128 |
| rosa_multiflora | Rmu_sc0002053.1_g000003 Rmu_sc0003942.1_g000005 Rmu_sc0009180.1_g000003 Rmu_sc0019790.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00079610 Rroxscaffold_2G00079650 Rroxscaffold_2G00079660 Rroxscaffold_2G00079670 Rroxscaffold_2G00120600 Rroxscaffold_5G00366530 |
| rosa_rugosa | Rorug01G0477900 Rorug02G0246000 Rorug02G0560700 Rorug02G0560800 |
| rosa_samantha | Rh2AG031900 Rh2AG637700 Rh2BG030900 Rh2BG651200 Rh2CG617300 Rh2DG031400 Rh2DG664800 Rh2DG664900 Rh4AG255100 Rh4BG260700 Rh4DG255200 |
| rosa_wichuraiana | Rw2G052690 Rw4G022050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 212 |
| AflIII | ACRYGT | 1 cut(s) | 336 |
| AgsI | TTSAA | 4 cut(s) | 117, 155, 279, 287 |
| AjnI | CCWGG | 1 cut(s) | 52 |
| AluBI | AGCT | 3 cut(s) | 173, 232, 320 |
| AluI | AGCT | 3 cut(s) | 173, 232, 320 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 19 |
| ApoI | RAATTY | 1 cut(s) | 212 |
| BccI | CCATC | 2 cut(s) | 196, 214 |
| BciT130I | CCWGG | 1 cut(s) | 54 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| Bme1390I | CCNGG | 1 cut(s) | 54 |
| BmiI | GGNNCC | 1 cut(s) | 124 |
| BmrFI | CCNGG | 1 cut(s) | 54 |
| BmsI | GCATC | 1 cut(s) | 168 |
| BpuEI | CTTGAG | 1 cut(s) | 237 |
| BsaAI | YACGTR | 1 cut(s) | 130 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 114, 144, 157, 187 |
| BseBI | CCWGG | 1 cut(s) | 54 |
| BseGI | GGATG | 1 cut(s) | 202 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| Bsp143I | GATC | 1 cut(s) | 83 |
| BspLI | GGNNCC | 1 cut(s) | 124 |
| BssMI | GATC | 1 cut(s) | 83 |
| Bst2UI | CCWGG | 1 cut(s) | 54 |
| BstBAI | YACGTR | 1 cut(s) | 130 |
| BstF5I | GGATG | 1 cut(s) | 202 |
| BstKTI | GATC | 1 cut(s) | 86 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 1 cut(s) | 83 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 78 |
| BstNI | CCWGG | 1 cut(s) | 54 |
| BstNSI | RCATGY | 1 cut(s) | 340 |
| BstSCI | CCNGG | 1 cut(s) | 52 |
| BstSNI | TACGTA | 1 cut(s) | 130 |
| BtsCI | GGATG | 1 cut(s) | 202 |
| CaiI | CAGNNNCTG | 1 cut(s) | 19 |
| CviAII | CATG | 3 cut(s) | 47, 77, 337 |
| CviJI | RGCY | 6 cut(s) | 72, 125, 136, 173, 232, 320 |
| CviKI_1 | RGCY | 6 cut(s) | 72, 125, 136, 173, 232, 320 |
| DpnI | GATC | 1 cut(s) | 85 |
| DpnII | GATC | 1 cut(s) | 83 |
| Eco105I | TACGTA | 1 cut(s) | 130 |
| EcoRII | CCWGG | 1 cut(s) | 52 |
| FaeI | CATG | 3 cut(s) | 50, 80, 340 |
| FatI | CATG | 3 cut(s) | 46, 76, 336 |
| FokI | GGATG | 1 cut(s) | 189 |
| Hin1II | CATG | 3 cut(s) | 50, 80, 340 |
| HinfI | GANTC | 1 cut(s) | 29 |
| Hpy188I | TCNGA | 4 cut(s) | 165, 177, 193, 211 |
| Hpy188III | TCNNGA | 1 cut(s) | 254 |
| HpyCH4IV | ACGT | 1 cut(s) | 129 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 78 |
| HpySE526I | ACGT | 1 cut(s) | 129 |
| Hsp92II | CATG | 3 cut(s) | 50, 80, 340 |
| Kzo9I | GATC | 1 cut(s) | 83 |
| LmnI | GCTCC | 3 cut(s) | 122, 178, 317 |
| LpnPI | CCDG | 4 cut(s) | 39, 46, 66, 272 |
| LweI | GCATC | 1 cut(s) | 168 |
| MaeII | ACGT | 1 cut(s) | 129 |
| MalI | GATC | 1 cut(s) | 85 |
| MboI | GATC | 1 cut(s) | 83 |
| MluCI | AATT | 3 cut(s) | 42, 150, 212 |
| MlyI | GAGTC | 1 cut(s) | 23 |
| MmeI | TCCRAC | 2 cut(s) | 188, 248 |
| MnlI | CCTC | 4 cut(s) | 171, 207, 261, 295 |
| MspR9I | CCNGG | 1 cut(s) | 54 |
| MvaI | CCWGG | 1 cut(s) | 54 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 78 |
| NdeII | GATC | 1 cut(s) | 83 |
| NlaIII | CATG | 3 cut(s) | 50, 80, 340 |
| NlaIV | GGNNCC | 1 cut(s) | 124 |
| NspI | RCATGY | 1 cut(s) | 340 |
| PciI | ACATGT | 1 cut(s) | 336 |
| PleI | GAGTC | 1 cut(s) | 23 |
| PpsI | GAGTC | 1 cut(s) | 23 |
| Ppu21I | YACGTR | 1 cut(s) | 130 |
| PscI | ACATGT | 1 cut(s) | 336 |
| Psp6I | CCWGG | 1 cut(s) | 52 |
| PspGI | CCWGG | 1 cut(s) | 52 |
| PspN4I | GGNNCC | 1 cut(s) | 124 |
| PstNI | CAGNNNCTG | 1 cut(s) | 19 |
| Sau3AI | GATC | 1 cut(s) | 83 |
| SchI | GAGTC | 1 cut(s) | 23 |
| ScrFI | CCNGG | 1 cut(s) | 54 |
| SetI | ASST | 7 cut(s) | 98, 132, 175, 199, 234, 253, 322 |
| SfaNI | GCATC | 1 cut(s) | 168 |
| SmlI | CTYRAG | 1 cut(s) | 252 |
| SmoI | CTYRAG | 1 cut(s) | 252 |
| SnaBI | TACGTA | 1 cut(s) | 130 |
| Sse9I | AATT | 3 cut(s) | 42, 150, 212 |
| SspI | AATATT | 1 cut(s) | 283 |
| StyD4I | CCNGG | 1 cut(s) | 52 |
| TaiI | ACGT | 1 cut(s) | 132 |
| TaqI | TCGA | 1 cut(s) | 363 |
| TasI | AATT | 3 cut(s) | 42, 150, 212 |
| TspDTI | ATGAA | 4 cut(s) | 35, 38, 65, 206 |
| TspGWI | ACGGA | 1 cut(s) | 330 |
| XapI | RAATTY | 1 cut(s) | 212 |
| XceI | RCATGY | 1 cut(s) | 340 |