RLG00000031662

Protein of unknown function, DUF599

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
7178488 .. 7179268
781 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031662

Sequence Viewer

Length: 606 bp
ATGAATATTGAGGAGGAGTACATAGATGTGCTTTTGGTCCCTGCTGGGTTACTGATCATGCTAGTTTACCACCTCTTCCTCCTTTTCAAGTACTTCAATAAGCCTCTCTCCACATCCATAGGTTACGAAAACAACGACAAACGAATTTGGGCTGGAAAAATCTTGCAGTTGCAGGGTGATGATCTTAGAAAGAGTGTTAAAACAGCTCTCAATGTGATTTCCTCGAGTACAACTGCAACTATTTATTTGGCAACAATCTCATTAACCCTCTGCTCACTTATCGGAGCTTGGATGGCAAACAACACCACCAATTTCTTCCCAAGAGAACTTATATACGGCAATACAACTAGGAACTTCGTCCATTCGAACTTCCTATTGAGCACTCCGGGTGCGACGGCTAAATCTGATGTGAAGAAAGTGGAAAAAGCAGTTCAAAGAGGAAGTGAATTTTGGTTACTTGGGCTTAGAGCTCTATATTGTGCTCTTAATTTTCTGCTGTGGTTTTGTGGACCTATACCGATGTTTGTATCCTCTATCATAATGGTGGTGATTCTGTATTGCCATGACTTTAGATCAGATGATCAAAAGGGTCTTAATGTAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

202

Amino Acids

22.69

Weight (kDa)

8.64

Isoelectric Point (pI)

29.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF599 PF04654 12 - 120 6.8e-17 Protein of unknown function, DUF599
DUF599 PF04654 116 - 193 2.9e-21 Protein of unknown function, DUF599
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 144, 446
AfaI GTAC 3 cut(s) 20, 92, 229
AgsI TTSAA 3 cut(s) 88, 97, 434
AjuI GAANNNNNNNTTGG 2 cut(s) 433, 465
AluBI AGCT 3 cut(s) 206, 287, 470
AluI AGCT 3 cut(s) 206, 287, 470
Alw21I GWGCWC 3 cut(s) 383, 472, 484
Ama87I CYCGRG 1 cut(s) 223
ApoI RAATTY 2 cut(s) 144, 446
AspS9I GGNCC 2 cut(s) 37, 509
AsuC2I CCSGG 1 cut(s) 387
AsuHPI GGTGA 2 cut(s) 188, 559
AsuII TTCGAA 1 cut(s) 365
AvaI CYCGRG 1 cut(s) 223
AvaII GGWCC 2 cut(s) 37, 509
BanII GRGCYC 1 cut(s) 472
Bbv12I GWGCWC 3 cut(s) 383, 472, 484
BccI CCATC 1 cut(s) 286
BceAI ACGGC 2 cut(s) 352, 411
BciVI GTATCC 1 cut(s) 538
BclI TGATCA 2 cut(s) 54, 580
BcnI CCSGG 1 cut(s) 387
BfaI CTAG 2 cut(s) 62, 348
BfuI GTATCC 1 cut(s) 538
BmcAI AGTACT 1 cut(s) 92
Bme1390I CCNGG 1 cut(s) 387
Bme18I GGWCC 2 cut(s) 37, 509
BmeT110I CYCGRG 1 cut(s) 223
BmgT120I GGNCC 2 cut(s) 37, 509
BmiI GGNNCC 1 cut(s) 39
BmrFI CCNGG 1 cut(s) 387
Bpu14I TTCGAA 1 cut(s) 365
BpuMI CCSGG 1 cut(s) 387
BseGI GGATG 2 cut(s) 113, 297
BseRI GAGGAG 2 cut(s) 26, 29
BseYI CCCAGC 1 cut(s) 44
BsiHKAI GWGCWC 3 cut(s) 383, 472, 484
BsiHKCI CYCGRG 1 cut(s) 223
BsiSI CCGG 1 cut(s) 386
BslFI GGGAC 1 cut(s) 23
BsmFI GGGAC 1 cut(s) 23
BsoBI CYCGRG 1 cut(s) 223
Bsp119I TTCGAA 1 cut(s) 365
Bsp1286I GDGCHC 3 cut(s) 383, 472, 484
Bsp143I GATC 4 cut(s) 54, 181, 572, 580
BspLI GGNNCC 1 cut(s) 39
BspT104I TTCGAA 1 cut(s) 365
BssMI GATC 4 cut(s) 54, 181, 572, 580
Bst6I CTCTTC 1 cut(s) 80
BstBI TTCGAA 1 cut(s) 365
BstDEI CTNAG 2 cut(s) 185, 464
BstF5I GGATG 2 cut(s) 113, 297
BstKTI GATC 4 cut(s) 57, 184, 575, 583
BstMBI GATC 4 cut(s) 54, 181, 572, 580
BstMWI GCNNNNNNNGC 1 cut(s) 293
BstSCI CCNGG 1 cut(s) 385
BsuI GTATCC 1 cut(s) 538
BtsCI GGATG 2 cut(s) 113, 297
Cfr13I GGNCC 2 cut(s) 37, 509
Csp6I GTAC 3 cut(s) 19, 91, 228
CviAII CATG 2 cut(s) 58, 563
CviJI RGCY 7 cut(s) 103, 152, 206, 287, 398, 463, 470
CviKI_1 RGCY 7 cut(s) 103, 152, 206, 287, 398, 463, 470
CviQI GTAC 3 cut(s) 19, 91, 228
DdeI CTNAG 2 cut(s) 185, 464
DpnI GATC 4 cut(s) 56, 183, 574, 582
DpnII GATC 4 cut(s) 54, 181, 572, 580
Eam1104I CTCTTC 1 cut(s) 80
EarI CTCTTC 1 cut(s) 80
Ecl136II GAGCTC 1 cut(s) 470
Eco24I GRGCYC 1 cut(s) 472
Eco47I GGWCC 2 cut(s) 37, 509
Eco53kI GAGCTC 1 cut(s) 470
Eco88I CYCGRG 1 cut(s) 223
EcoICRI GAGCTC 1 cut(s) 470
EcoT38I GRGCYC 1 cut(s) 472
FaeI CATG 2 cut(s) 61, 566
FaiI YATR 9 cut(s) 23, 59, 119, 332, 334, 475, 515, 539, 564
FaqI GGGAC 1 cut(s) 23
FatI CATG 2 cut(s) 57, 562
FbaI TGATCA 2 cut(s) 54, 580
FokI GGATG 2 cut(s) 100, 304
FriOI GRGCYC 1 cut(s) 472
FspBI CTAG 2 cut(s) 62, 348
GsaI CCCAGC 1 cut(s) 48
HapII CCGG 1 cut(s) 386
Hin1II CATG 2 cut(s) 61, 566
HinfI GANTC 1 cut(s) 550
HpaII CCGG 1 cut(s) 386
HphI GGTGA 2 cut(s) 188, 559
Hpy166II GTNNAC 2 cut(s) 67, 509
Hpy188I TCNGA 3 cut(s) 284, 406, 577
Hpy8I GTNNAC 2 cut(s) 67, 509
Hpy99I CGWCG 1 cut(s) 397
HpyCH4V TGCA 3 cut(s) 166, 172, 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 293
HpyF3I CTNAG 2 cut(s) 185, 464
Hsp92II CATG 2 cut(s) 61, 566
Ksp22I TGATCA 2 cut(s) 54, 580
Kzo9I GATC 4 cut(s) 54, 181, 572, 580
LmnI GCTCC 1 cut(s) 284
LpnPI CCDG 5 cut(s) 30, 54, 138, 158, 399
MaeI CTAG 2 cut(s) 62, 348
MaeIII GTNAC 3 cut(s) 48, 122, 453
MalI GATC 4 cut(s) 56, 183, 574, 582
MboI GATC 4 cut(s) 54, 181, 572, 580
MboII GAAGA 3 cut(s) 67, 307, 424
MhlI GDGCHC 3 cut(s) 383, 472, 484
MluCI AATT 4 cut(s) 144, 310, 446, 487
MnlI CCTC 9 cut(s) 4, 7, 83, 89, 114, 232, 278, 431, 541
MseI TTAA 4 cut(s) 198, 263, 486, 594
MslI CAYNNNNRTG 2 cut(s) 26, 542
MspI CCGG 1 cut(s) 386
MspR9I CCNGG 1 cut(s) 387
MwoI GCNNNNNNNGC 1 cut(s) 293
NciI CCSGG 1 cut(s) 387
NdeII GATC 4 cut(s) 54, 181, 572, 580
NlaIII CATG 2 cut(s) 61, 566
NlaIV GGNNCC 1 cut(s) 39
NspV TTCGAA 1 cut(s) 365
PaeR7I CTCGAG 1 cut(s) 223
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PfeI GAWTC 1 cut(s) 550
Psp124BI GAGCTC 1 cut(s) 472
PspFI CCCAGC 1 cut(s) 44
PspN4I GGNNCC 1 cut(s) 39
PspPI GGNCC 2 cut(s) 37, 509
PspXI VCTCGAGB 1 cut(s) 223
RsaI GTAC 3 cut(s) 20, 92, 229
RsaNI GTAC 3 cut(s) 19, 91, 228
RseI CAYNNNNRTG 2 cut(s) 26, 542
SacI GAGCTC 1 cut(s) 472
SaqAI TTAA 4 cut(s) 198, 263, 486, 594
Sau3AI GATC 4 cut(s) 54, 181, 572, 580
Sau96I GGNCC 2 cut(s) 37, 509
ScaI AGTACT 1 cut(s) 92
ScrFI CCNGG 1 cut(s) 387
SduI GDGCHC 3 cut(s) 383, 472, 484
SetI ASST 6 cut(s) 75, 124, 208, 289, 472, 514
Sfr274I CTCGAG 1 cut(s) 223
SfuI TTCGAA 1 cut(s) 365
SinI GGWCC 2 cut(s) 37, 509
SlaI CTCGAG 1 cut(s) 223
SmiMI CAYNNNNRTG 2 cut(s) 26, 542
SmlI CTYRAG 1 cut(s) 223
SmoI CTYRAG 1 cut(s) 223
Sse9I AATT 4 cut(s) 144, 310, 446, 487
SspI AATATT 1 cut(s) 7
SspMI CTAG 2 cut(s) 62, 348
SstI GAGCTC 1 cut(s) 472
StyD4I CCNGG 1 cut(s) 385
TaqI TCGA 2 cut(s) 224, 365
TasI AATT 4 cut(s) 144, 310, 446, 487
TatI WGTACW 3 cut(s) 18, 90, 227
TfiI GAWTC 1 cut(s) 550
Tru1I TTAA 4 cut(s) 198, 263, 486, 594
Tru9I TTAA 4 cut(s) 198, 263, 486, 594
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 2 cut(s) 37, 509
XapI RAATTY 2 cut(s) 144, 446
XhoI CTCGAG 1 cut(s) 223
XspI CTAG 2 cut(s) 62, 348
ZrmI AGTACT 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.