RLG00000036969

Belongs to the DOCK family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
87050247 .. 87050844
598 bp
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UTR
Exon/CDS
Intron
RLM00000036969

Sequence Viewer

Length: 354 bp
ATGAAGTTAGATTTGGATAGGATTGAGCGACATGGTTTTAAACCCATTGCAGAATTGCACATTGCCAGTGCAAGGCGAACCAAGGCAGACGATACCACTGATGATGATTTACCAAGTACCTCGGAGCGCCAATTTACAGATGCAGTAGCCTCTGATTTAGCACACTCCAATGATCCAAAGCATTTTGGTCAATCTCCTCTCCCTGCTTATCAACCAGCTTTTGATTGGGAAAGTGAAAGATCATTGATATGCGGTCAAAGGGTTCCAGAAACTCCAATATCTAGTATGGCAATTTGGCCTGAAGATCTCAGTGAAAGTTCTGTCCCTATCATTTCAAGCGGGACTGGTTGGTGA

Protein Analysis

118

Amino Acids

12.98

Weight (kDa)

4.69

Isoelectric Point (pI)

61.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 252, 339
AclWI GGATC 1 cut(s) 167
AcuI CTGAAG 1 cut(s) 321
AfaI GTAC 1 cut(s) 118
AfiI CCNNNNNNNGG 1 cut(s) 72
AgsI TTSAA 1 cut(s) 336
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AluBI AGCT 1 cut(s) 218
AluI AGCT 1 cut(s) 218
AlwI GGATC 1 cut(s) 167
AoxI GGCC 1 cut(s) 296
AspLEI GCGC 1 cut(s) 129
BfaI CTAG 1 cut(s) 282
BfoI RGCGCY 1 cut(s) 130
BglII AGATCT 1 cut(s) 304
BmiI GGNNCC 1 cut(s) 264
BmsI GCATC 1 cut(s) 130
BsaJI CCNNGG 2 cut(s) 81, 120
Bsc4I CCNNNNNNNGG 1 cut(s) 72
Bse1I ACTGG 2 cut(s) 66, 349
Bse3DI GCAATG 2 cut(s) 45, 60
BseDI CCNNGG 2 cut(s) 81, 120
BseLI CCNNNNNNNGG 1 cut(s) 72
BseMI GCAATG 2 cut(s) 45, 60
BseMII CTCAG 1 cut(s) 322
BseNI ACTGG 2 cut(s) 66, 349
BseRI GAGGAG 1 cut(s) 186
BshFI GGCC 1 cut(s) 298
BslFI GGGAC 1 cut(s) 308
BslI CCNNNNNNNGG 1 cut(s) 72
BsmFI GGGAC 1 cut(s) 308
BsnI GGCC 1 cut(s) 298
Bsp143I GATC 3 cut(s) 172, 239, 304
BspACI CCGC 2 cut(s) 252, 339
BspANI GGCC 1 cut(s) 298
BspCNI CTCAG 1 cut(s) 321
BspLI GGNNCC 1 cut(s) 264
BspPI GGATC 1 cut(s) 167
BsrDI GCAATG 2 cut(s) 45, 60
BsrI ACTGG 2 cut(s) 66, 349
BssECI CCNNGG 2 cut(s) 81, 120
BssMI GATC 3 cut(s) 172, 239, 304
BssT1I CCWWGG 1 cut(s) 81
BstDEI CTNAG 1 cut(s) 308
BstH2I RGCGCY 1 cut(s) 130
BstHHI GCGC 1 cut(s) 129
BstKTI GATC 3 cut(s) 175, 242, 307
BstMBI GATC 3 cut(s) 172, 239, 304
BstX2I RGATCY 1 cut(s) 304
BstYI RGATCY 1 cut(s) 304
BsuRI GGCC 1 cut(s) 298
BtsIMutI CAGTG 3 cut(s) 73, 96, 316
CfoI GCGC 1 cut(s) 129
Csp6I GTAC 1 cut(s) 117
CviAII CATG 1 cut(s) 32
CviJI RGCY 3 cut(s) 149, 218, 298
CviKI_1 RGCY 3 cut(s) 149, 218, 298
CviQI GTAC 1 cut(s) 117
DdeI CTNAG 1 cut(s) 308
DpnI GATC 3 cut(s) 174, 241, 306
DpnII GATC 3 cut(s) 172, 239, 304
DraI TTTAAA 1 cut(s) 40
Eco130I CCWWGG 1 cut(s) 81
Eco57I CTGAAG 1 cut(s) 321
EcoT14I CCWWGG 1 cut(s) 81
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 1 cut(s) 35
FaiI YATR 3 cut(s) 33, 250, 287
FaqI GGGAC 1 cut(s) 308
FatI CATG 1 cut(s) 31
FauI CCCGC 1 cut(s) 332
FspBI CTAG 1 cut(s) 282
GlaI GCGC 1 cut(s) 128
HaeII RGCGCY 1 cut(s) 130
HaeIII GGCC 1 cut(s) 298
HhaI GCGC 1 cut(s) 129
Hin1II CATG 1 cut(s) 35
Hin6I GCGC 1 cut(s) 127
HinP1I GCGC 1 cut(s) 127
Hpy188I TCNGA 2 cut(s) 124, 154
Hpy188III TCNNGA 1 cut(s) 266
HpyCH4V TGCA 4 cut(s) 50, 58, 71, 143
HpyF3I CTNAG 1 cut(s) 308
Hsp92II CATG 1 cut(s) 35
HspAI GCGC 1 cut(s) 127
Kzo9I GATC 3 cut(s) 172, 239, 304
LmnI GCTCC 1 cut(s) 124
LpnPI CCDG 6 cut(s) 79, 216, 228, 279, 312, 330
LweI GCATC 1 cut(s) 130
MaeI CTAG 1 cut(s) 282
MalI GATC 3 cut(s) 174, 241, 306
MboI GATC 3 cut(s) 172, 239, 304
MboII GAAGA 1 cut(s) 314
MflI RGATCY 1 cut(s) 304
MluCI AATT 3 cut(s) 53, 131, 291
MnlI CCTC 3 cut(s) 130, 160, 207
MseI TTAA 1 cut(s) 39
MslI CAYNNNNRTG 2 cut(s) 168, 247
NdeII GATC 3 cut(s) 172, 239, 304
NlaIII CATG 1 cut(s) 35
NlaIV GGNNCC 1 cut(s) 264
PspN4I GGNNCC 1 cut(s) 264
PsuI RGATCY 1 cut(s) 304
RsaI GTAC 1 cut(s) 118
RsaNI GTAC 1 cut(s) 117
RseI CAYNNNNRTG 2 cut(s) 168, 247
SaqAI TTAA 1 cut(s) 39
Sau3AI GATC 3 cut(s) 172, 239, 304
SetI ASST 2 cut(s) 122, 220
SfaNI GCATC 1 cut(s) 130
SmiMI CAYNNNNRTG 2 cut(s) 168, 247
Sse9I AATT 3 cut(s) 53, 131, 291
SsiI CCGC 2 cut(s) 252, 339
SspMI CTAG 1 cut(s) 282
StyI CCWWGG 1 cut(s) 81
TasI AATT 3 cut(s) 53, 131, 291
Tru1I TTAA 1 cut(s) 39
Tru9I TTAA 1 cut(s) 39
TscAI CASTG 3 cut(s) 73, 103, 316
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 3 cut(s) 73, 103, 316
XcmI CCANNNNNNNNNTGG 1 cut(s) 222
XspI CTAG 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.