Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001516

Physical Location & Seq

Genomic Coordinates Reverse (-)

76222508 .. 76227492

Gene Structure 4985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00054850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGGAAGTCTTTGGGTTTGAGAAGCGTATCAAGCACTACACCAACTGTCAGAGAATACTCTTGGTCGGAGAAGGAGACTTCTCCTTCGCCGTTTCCTTAGCCAGAGCTTTCGGCTCTTCCACCAAGATGATCGCTACTTCTCTCGACACCAGAGAGTCATTGAGGGAGAAGTATTCAAAGGCTATGAGCAATGTGATGGAATTGGAGAACAGGGGATGCAGAGTACTTCATGAAGTGGATGTGCACAGAATGAGCCAACACCCTTTTCTGAGTTGTTTTCGGTTTGATCGAATAATCTACAATTTTCCTCATGCCGGTTACTTACACGGTCAATCATCATCCGAGCACAACCAGTTTCAAATTTGGTTCCATCAGGATTTGGTGAAGGGATTCTTCAAGAATGCGCGTGAAATGCTTACCGAAATAGGAGAAATTCATGTGACACACAAGACAACATATCCTTTCAGTCGATGGGAAATAGTGAAGTTAGCAGGAGAGGTTGGGTTGTATCTGCTTCAGGAAGAAAAGTTCTCAAAATGGGATTATCCAGGTTATGAAAATAAGAGAGGAGCTGGGTTATGTGATCAAACTTTTGCTGTTGGAGAATGTTGCACCTTCAAATTTGCCAAGCATTCTGCCCCTTCCAGTTACTACATTGACTTGGTTCGGGCTTACGGTCAGGATTCTCGAAATAACGGTCGTTACATGCACCACTGTTTAATACACCCAATGGGTAAATTGACCAAGCAATTCCTTCCAAATGAAAAACTTAACTCTGTTTTCAAGTTTAGCTTTTTGATGACTATGGATAGATATACAGCTGCAGAAAGCTTCTATAAGCTTGCTATGGCATTTGCCCTTGTCCCAGATCTTCATATAATTACTTTCGATCTGGCTTTGGTGGCCAGAAATGATGGTGTTTGGAGCAAAGATCACATAACTGCTCTACGTAAAATTTGTCCAATGGTCAGTAGTGAGATCAGCTCTGAGGCTGCTGCAGCTGAGGTAGAGGGATATGGCACATCAAAACTTACTGTTGACTCTGCCGTGAAGGACCTACATCTCGCAAATAAGCTCTTTTCTCAAGCTGAACTTTTTCATTTCTGTACAAGCATTCTGGAACTTGTTATTCCAGTTTATAAAAGCAGGCGGGCATATGGACAGCTGAGCAAATGTCACACAATGCTTACTAATATATATGAATCAATCCTTGAGCAGGAATCAAGCCCAATTCCATTCACTGATGCAACATACTATAGGGTAGGGTTTTATGGTGATAGATTTGGAAAATTAAACAGAAAGGAATATGTATACAGGGAGCCACGTGATGTAAGACCAGGTGACATAATGGAGAAACTTAGCCATAGCTACGAGTCTGGTATGGATGGAAATCACACCTTACACATCATTCCGGATTATAGGCAGGTAAAGGCAGATGAGTTGCAGTCTGGAGTATGCTATTTTCAGATAACTGCTGTTGATCCAGTCATGGAAGATGAAGATTTGGGAAGCAGAAGGAAGAGAATCTTTTTTCTCTTTCGACAGGAAGTGTTCGTGCGCGAGCTTGTAGTTACTGCATCCGAATCGCTTGAGTTCTCCCCTGTGGAAAATGCCATTGGAATGATTGAAACTCGGACGGCTGCTCTACGTAATGAACTTGAAGAGCCTCGCAGTTCTGAGGGGGATCAACTCCCACGTCTCCAGAGCCTGCAGAGAATTCTTCAAGGAAGTATTGCAGTTCAGGTCAACAGTGGTGTTCTAAGTGTGTGCACTGCATTCCTTTCCAGTGAGCCTGCCACATGGTTGCGGTCACAAGAATTGCAGCAACTCATTGCGGCTCTCCTTGAATTTATGGCTGTATGCAAGCGTGCCATCCATGTACACTTCAGATTGATTGGTGAGGAAGACCAAGAATTCCACACACAGCTTGTGAATGGATTTCAATCTCTTGACTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0006810 GO:0008064 GO:0008150 GO:0008360 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009958 GO:0009966 GO:0009987 GO:0010646 GO:0010928 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0017016 GO:0017048 GO:0019898 GO:0019899 GO:0022603 GO:0022604 GO:0023051 GO:0030832 GO:0031267 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051128 GO:0051179 GO:0051234 GO:0051493 GO:0065007 GO:0065008 GO:0065009 GO:0070971 GO:0071840 GO:0071944 GO:0090066 GO:0098772 GO:0110053 GO:1902903

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DHR-2 DOCK-C2

Protein Analysis

652

Amino Acids

74.73

Weight (kDa)

6.35

Isoelectric Point (pI)

50.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BMT5-like	PF10354	20 - 189	8.6e-55	rRNA (uridine-N3-)-methyltransferase BTM5-like
DHR-2_Lobe_A	PF06920	301 - 405	5.8e-18	DHR-2, Lobe A
DHR-2_Lobe_C	PF20421	561 - 650	1.3e-23	DHR-2, Lobe C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16340 AT4G16340
fragaria_vesca	FvH4_3g14770 FvH4_3g14770 FvH4_3g14770
malus_domestica	MD05G1229900.v1.1 MD05G1233200.v1.1 MD10G1209700.v1.1
prunus_persica	Prupe.3G108400_v2.0.a1 Prupe.4G132800_v2.0.a1
pyrus_communis	pycom05g21080 pycom05g21090 pycom10g17800 pycom10g17820
rosa_chinensis	RchiOBHm_Chr1g0327621 RchiOBHm_Chr3g0473981 RchiOBHm_Chr5g0024291 RchiOBHm_Chr5g0024301 RchiOBHm_Chr5g0024371 RchiOBHm_Chr5g0024381
rosa_laevigata	RLG00000029979 RLG00000032795 RLG00000036969
rosa_multiflora	Rmu_co8048528.1_g000001 Rmu_co8378897.1_g000002 Rmu_sc0005861.1_g000003 Rmu_sc0015218.1_g000005 Rmu_ssc0000042.1_g000009
rosa_roxburghii	Rroxscaffold_1G00054850 Rroxscaffold_1G00054890 Rroxscaffold_1G00055790 Rroxscaffold_1G00055850 Rroxscaffold_4G00322510
rosa_rugosa	Rorug01G0068800 Rorug05G0083000 Rorug05G0083100
rosa_samantha	Rh3AG187600 Rh3BG216300 Rh3CG212800 Rh5AG173700 Rh5BG170500 Rh5BG170900 Rh5BG171900 Rh5BG172000 Rh5CG186800 Rh5CG187500 Rh5CG187600 Rh5DG173100
rosa_wichuraiana	Rw0G000890 Rw3G017190 Rw5G015680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1140
Acc36I	ACCTGC	1 cut(s)	1414
AccI	GTMKAC	1 cut(s)	1311
AccII	CGCG	2 cut(s)	406, 1560
AccIII	TCCGGA	1 cut(s)	1411
AciI	CCGC	3 cut(s)	1150, 1807, 1835
AclWI	GGATC	2 cut(s)	1475, 1692
AcoI	YGGCCR	1 cut(s)	903
AcsI	RAATTY	7 cut(s)	360, 432, 620, 954, 1716, 1847, 1913
AcuI	CTGAAG	2 cut(s)	500, 1870
AcvI	CACGTG	1 cut(s)	1325
AfaI	GTAC	3 cut(s)	225, 1108, 1881
AfiI	CCNNNNNNNGG	2 cut(s)	314, 1216
AjiI	CACGTC	1 cut(s)	1697
AjnI	CCWGG	2 cut(s)	547, 1336
AjuI	GAANNNNNNNTTGG	4 cut(s)	249, 281, 1599, 1631
AloI	GAACNNNNNNTCC	2 cut(s)	512, 544
Alw21I	GWGCWC	3 cut(s)	246, 348, 1772
Alw26I	GTCTC	2 cut(s)	69, 1703
Alw44I	GTGCAC	2 cut(s)	242, 1768
AlwI	GGATC	2 cut(s)	1475, 1692
AlwNI	CAGNNNCTG	1 cut(s)	1708
Aor13HI	TCCGGA	1 cut(s)	1411
AoxI	GGCC	1 cut(s)	903
ApaLI	GTGCAC	2 cut(s)	242, 1768
ApeKI	GCWGC	6 cut(s)	821, 992, 995, 998, 1640, 1822
ApoI	RAATTY	7 cut(s)	360, 432, 620, 954, 1716, 1847, 1913
ArsI	GACNNNNNNTTYG	4 cut(s)	68, 100, 682, 714
Asp700I	GAANNNNTTC	2 cut(s)	389, 1095
AspLEI	GCGC	2 cut(s)	406, 1560
AspS9I	GGNCC	1 cut(s)	1054
AsuHPI	GGTGA	4 cut(s)	394, 1286, 1352, 1910
AvaII	GGWCC	1 cut(s)	1054
BaeGI	GKGCMC	2 cut(s)	246, 1772
BalI	TGGCCA	1 cut(s)	905
BbrPI	CACGTG	1 cut(s)	1325
BbsI	GAAGAC	1 cut(s)	1911
Bbv12I	GWGCWC	3 cut(s)	246, 348, 1772
BbvCI	CCTCAGC	1 cut(s)	1002
BbvI	GCAGC	6 cut(s)	808, 979, 982, 1010, 1627, 1834
BccI	CCATC	6 cut(s)	190, 378, 465, 908, 1379, 1880
BceAI	ACGGC	3 cut(s)	74, 1031, 1653
BcgI	CGANNNNNNTGC	2 cut(s)	1566, 1600
BciT130I	CCWGG	2 cut(s)	549, 1338
BclI	TGATCA	1 cut(s)	583
BcoDI	GTCTC	2 cut(s)	69, 1703
BfmI	CTRYAG	4 cut(s)	822, 996, 1255, 1709
BfuAI	ACCTGC	1 cut(s)	1414
BglII	AGATCT	1 cut(s)	868
BisI	GCNGC	7 cut(s)	822, 993, 996, 999, 1641, 1823, 1836
BlpI	GCTNAGC	1 cut(s)	1166
BlsI	GCNGC	7 cut(s)	823, 994, 997, 1000, 1642, 1824, 1837
BmcAI	AGTACT	1 cut(s)	225
Bme1390I	CCNGG	2 cut(s)	549, 1338
Bme18I	GGWCC	1 cut(s)	1054
BmgBI	CACGTC	1 cut(s)	1697
BmgT120I	GGNCC	1 cut(s)	1054
BmiI	GGNNCC	2 cut(s)	368, 1320
BmrFI	CCNGG	2 cut(s)	549, 1338
BmsI	GCATC	3 cut(s)	206, 1234, 1586
BpiI	GAAGAC	1 cut(s)	1911
BplI	GAGNNNNNCTC	2 cut(s)	968, 1000
BpmI	CTGGAG	2 cut(s)	1470, 1685
Bpu10I	CCTNAGC	2 cut(s)	97, 1002
Bpu1102I	GCTNAGC	1 cut(s)	1166
BpuEI	CTTGAG	3 cut(s)	1068, 1232, 1610
BsaAI	YACGTR	3 cut(s)	950, 1325, 1649
BsaBI	GATNNNNATC	2 cut(s)	1389, 1942
BsaWI	WCCGGW	1 cut(s)	1411
Bsc4I	CCNNNNNNNGG	2 cut(s)	314, 1216
Bse118I	RCCGGY	1 cut(s)	314
Bse1I	ACTGG	5 cut(s)	352, 645, 1133, 1484, 1785
Bse3DI	GCAATG	2 cut(s)	196, 1830
Bse8I	GATNNNNATC	2 cut(s)	1389, 1942
BseAI	TCCGGA	1 cut(s)	1411
BseBI	CCWGG	2 cut(s)	549, 1338
BseGI	GGATG	6 cut(s)	221, 244, 338, 1390, 1577, 1872
BseJI	GATNNNNATC	2 cut(s)	1389, 1942
BseLI	CCNNNNNNNGG	2 cut(s)	314, 1216
BseMI	GCAATG	2 cut(s)	196, 1830
BseMII	CTCAG	5 cut(s)	260, 978, 993, 1157, 1668
BseNI	ACTGG	5 cut(s)	352, 645, 1133, 1484, 1785
BseRI	GAGGAG	1 cut(s)	582
BseSI	GKGCMC	2 cut(s)	246, 1772
BseXI	GCAGC	6 cut(s)	808, 979, 982, 1010, 1627, 1834
BseYI	CCCAGC	1 cut(s)	572
Bsh1236I	CGCG	2 cut(s)	406, 1560
Bsh1285I	CGRYCG	1 cut(s)	700
BshFI	GGCC	1 cut(s)	905
BsiEI	CGRYCG	1 cut(s)	700
BsiHKAI	GWGCWC	3 cut(s)	246, 348, 1772
BsiSI	CCGG	2 cut(s)	315, 1412
BslFI	GGGAC	1 cut(s)	848
BslI	CCNNNNNNNGG	2 cut(s)	314, 1216
BsmAI	GTCTC	2 cut(s)	69, 1703
BsmBI	CGTCTC	1 cut(s)	1703
BsmFI	GGGAC	1 cut(s)	848
BsmI	GAATGC	4 cut(s)	406, 631, 1113, 1775
BsnI	GGCC	1 cut(s)	905
Bsp1286I	GDGCHC	3 cut(s)	246, 348, 1772
Bsp13I	TCCGGA	1 cut(s)	1411
Bsp1407I	TGTACA	2 cut(s)	1106, 1879
Bsp143I	GATC	9 cut(s)	129, 286, 583, 868, 889, 931, 978, 1480, 1684
Bsp1720I	GCTNAGC	1 cut(s)	1166
BspACI	CCGC	3 cut(s)	1150, 1807, 1835
BspANI	GGCC	1 cut(s)	905
BspCNI	CTCAG	5 cut(s)	261, 979, 994, 1158, 1669
BspEI	TCCGGA	1 cut(s)	1411
BspFNI	CGCG	2 cut(s)	406, 1560
BspHI	TCATGA	1 cut(s)	229
BspLI	GGNNCC	2 cut(s)	368, 1320
BspMAI	CTGCAG	3 cut(s)	826, 1000, 1713
BspMI	ACCTGC	1 cut(s)	1414
BspPI	GGATC	2 cut(s)	1475, 1692
BspQI	GCTCTTC	2 cut(s)	121, 1656
BsrDI	GCAATG	2 cut(s)	196, 1830
BsrFI	RCCGGY	1 cut(s)	314
BsrGI	TGTACA	2 cut(s)	1106, 1879
BsrI	ACTGG	5 cut(s)	352, 645, 1133, 1484, 1785
BssAI	RCCGGY	1 cut(s)	314
BssMI	GATC	9 cut(s)	129, 286, 583, 868, 889, 931, 978, 1480, 1684
BssNAI	GTATAC	1 cut(s)	1312
Bst1107I	GTATAC	1 cut(s)	1312
Bst2UI	CCWGG	2 cut(s)	549, 1338
Bst4CI	ACNGT	7 cut(s)	47, 329, 677, 698, 716, 1036, 1751
Bst6I	CTCTTC	3 cut(s)	121, 1514, 1656
BstAUI	TGTACA	2 cut(s)	1106, 1879
BstBAI	YACGTR	3 cut(s)	950, 1325, 1649
BstC8I	GCNNGC	8 cut(s)	843, 1148, 1152, 1562, 1709, 1794, 1865, 1869
BstDEI	CTNAG	8 cut(s)	97, 269, 987, 1002, 1166, 1358, 1677, 1760
BstENI	CCTNNNNNAGG	1 cut(s)	1214
BstF5I	GGATG	6 cut(s)	221, 244, 338, 1390, 1577, 1872
BstFNI	CGCG	2 cut(s)	406, 1560
BstHHI	GCGC	2 cut(s)	406, 1560
BstKTI	GATC	9 cut(s)	132, 289, 586, 871, 892, 934, 981, 1483, 1687
BstMAI	GTCTC	2 cut(s)	69, 1703
BstMBI	GATC	9 cut(s)	129, 286, 583, 868, 889, 931, 978, 1480, 1684
BstMCI	CGRYCG	1 cut(s)	700
BstMWI	GCNNNNNNNGC	4 cut(s)	31, 412, 902, 998
BstNI	CCWGG	2 cut(s)	549, 1338
BstNSI	RCATGY	1 cut(s)	709
BstSCI	CCNGG	2 cut(s)	547, 1336
BstSFI	CTRYAG	4 cut(s)	822, 996, 1255, 1709
BstSLI	GKGCMC	2 cut(s)	246, 1772
BstSNI	TACGTA	2 cut(s)	950, 1649
BstUI	CGCG	2 cut(s)	406, 1560
BstV1I	GCAGC	6 cut(s)	808, 979, 982, 1010, 1627, 1834
BstV2I	GAAGAC	1 cut(s)	1911
BstX2I	RGATCY	1 cut(s)	868
BstYI	RGATCY	1 cut(s)	868
BstZ17I	GTATAC	1 cut(s)	1312
BsuRI	GGCC	1 cut(s)	905
BtrI	CACGTC	1 cut(s)	1697
BtsCI	GGATG	6 cut(s)	221, 244, 338, 1390, 1577, 1872
BtsI	GCAGTG	1 cut(s)	1770
BtsIMutI	CAGTG	5 cut(s)	712, 1239, 1756, 1770, 1792
BveI	ACCTGC	1 cut(s)	1414
Cac8I	GCNNGC	8 cut(s)	843, 1148, 1152, 1562, 1709, 1794, 1865, 1869
CaiI	CAGNNNCTG	1 cut(s)	1708
CciI	TCATGA	1 cut(s)	229
CfoI	GCGC	2 cut(s)	406, 1560
Cfr10I	RCCGGY	1 cut(s)	314
Cfr13I	GGNCC	1 cut(s)	1054
CsiI	ACCWGGT	1 cut(s)	1336
Csp6I	GTAC	3 cut(s)	224, 1107, 1880
CviAII	CATG	7 cut(s)	230, 311, 437, 706, 1489, 1800, 1877
CviQI	GTAC	3 cut(s)	224, 1107, 1880
DdeI	CTNAG	8 cut(s)	97, 269, 987, 1002, 1166, 1358, 1677, 1760
DpnI	GATC	9 cut(s)	131, 288, 585, 870, 891, 933, 980, 1482, 1686
DpnII	GATC	9 cut(s)	129, 286, 583, 868, 889, 931, 978, 1480, 1684
EaeI	YGGCCR	1 cut(s)	903
Eam1104I	CTCTTC	3 cut(s)	121, 1514, 1656
EarI	CTCTTC	3 cut(s)	121, 1514, 1656
Eco105I	TACGTA	2 cut(s)	950, 1649
Eco47I	GGWCC	1 cut(s)	1054
Eco57I	CTGAAG	2 cut(s)	500, 1870
Eco72I	CACGTG	1 cut(s)	1325
EcoNI	CCTNNNNNAGG	1 cut(s)	1214
EcoO109I	RGGNCCY	1 cut(s)	1054
EcoRI	GAATTC	2 cut(s)	1716, 1913
EcoRII	CCWGG	2 cut(s)	547, 1336
Esp3I	CGTCTC	1 cut(s)	1703
FaeI	CATG	7 cut(s)	233, 314, 440, 709, 1492, 1803, 1880
FalI	AAGNNNNNCTT	8 cut(s)	377, 409, 776, 808, 1077, 1109, 1511, 1543
FaqI	GGGAC	1 cut(s)	848
FatI	CATG	7 cut(s)	229, 310, 436, 705, 1488, 1799, 1876
FauI	CCCGC	1 cut(s)	1143
FauNDI	CATATG	1 cut(s)	1156
FbaI	TGATCA	1 cut(s)	583
FblI	GTMKAC	1 cut(s)	1311
Fnu4HI	GCNGC	7 cut(s)	822, 993, 996, 999, 1641, 1823, 1836
FokI	GGATG	6 cut(s)	228, 251, 325, 1397, 1564, 1859
Fsp4HI	GCNGC	7 cut(s)	822, 993, 996, 999, 1641, 1823, 1836
GlaI	GCGC	2 cut(s)	405, 1559
GluI	GCNGC	7 cut(s)	822, 993, 996, 999, 1641, 1823, 1836
GsaI	CCCAGC	1 cut(s)	576
GsuI	CTGGAG	2 cut(s)	1470, 1685
HaeIII	GGCC	1 cut(s)	905
HapII	CCGG	2 cut(s)	315, 1412
HhaI	GCGC	2 cut(s)	406, 1560
Hin1II	CATG	7 cut(s)	233, 314, 440, 709, 1492, 1803, 1880
Hin6I	GCGC	2 cut(s)	404, 1558
HinP1I	GCGC	2 cut(s)	404, 1558
HincII	GTYRAC	2 cut(s)	1039, 1747
HindII	GTYRAC	2 cut(s)	1039, 1747
HindIII	AAGCTT	2 cut(s)	829, 839
HinfI	GANTC	9 cut(s)	155, 390, 683, 1040, 1202, 1220, 1373, 1524, 1583
HpaII	CCGG	2 cut(s)	315, 1412
HphI	GGTGA	4 cut(s)	394, 1286, 1352, 1910
Hpy166II	GTNNAC	6 cut(s)	244, 1039, 1312, 1747, 1770, 1882
Hpy8I	GTNNAC	6 cut(s)	244, 1039, 1312, 1747, 1770, 1882
HpyAV	CCTTC	8 cut(s)	65, 94, 379, 625, 651, 764, 1045, 1509
HpyCH4III	ACNGT	7 cut(s)	47, 329, 677, 698, 716, 1036, 1751
HpyCH4IV	ACGT	4 cut(s)	949, 1324, 1648, 1696
HpyF10VI	GCNNNNNNNGC	4 cut(s)	31, 412, 902, 998
HpyF3I	CTNAG	8 cut(s)	97, 269, 987, 1002, 1166, 1358, 1677, 1760
HpySE526I	ACGT	4 cut(s)	949, 1324, 1648, 1696
Hsp92II	CATG	7 cut(s)	233, 314, 440, 709, 1492, 1803, 1880
HspAI	GCGC	2 cut(s)	404, 1558
Kpn2I	TCCGGA	1 cut(s)	1411
Ksp22I	TGATCA	1 cut(s)	583
Kzo9I	GATC	9 cut(s)	129, 286, 583, 868, 889, 931, 978, 1480, 1684
LguI	GCTCTTC	2 cut(s)	121, 1656
LmnI	GCTCC	3 cut(s)	569, 924, 1318
Lsp1109I	GCAGC	6 cut(s)	808, 979, 982, 1010, 1627, 1834
LweI	GCATC	3 cut(s)	206, 1234, 1586
MabI	ACCWGGT	1 cut(s)	1336
MaeII	ACGT	4 cut(s)	949, 1324, 1648, 1696
MaeIII	GTNAC	8 cut(s)	317, 439, 647, 701, 1175, 1340, 1570, 1809
MalI	GATC	9 cut(s)	131, 288, 585, 870, 891, 933, 980, 1482, 1686
MboI	GATC	9 cut(s)	129, 286, 583, 868, 889, 931, 978, 1480, 1684
MflI	RGATCY	1 cut(s)	868
MhlI	GDGCHC	3 cut(s)	246, 348, 1772
MlsI	TGGCCA	1 cut(s)	905
MluNI	TGGCCA	1 cut(s)	905
MlyI	GAGTC	3 cut(s)	164, 1034, 1382
MmeI	TCCRAC	2 cut(s)	46, 580
Mox20I	TGGCCA	1 cut(s)	905
MroI	TCCGGA	1 cut(s)	1411
MroXI	GAANNNNTTC	2 cut(s)	389, 1095
MscI	TGGCCA	1 cut(s)	905
MseI	TTAA	3 cut(s)	719, 771, 1292
MslI	CAYNNNNRTG	2 cut(s)	125, 1619
Msp20I	TGGCCA	1 cut(s)	905
MspA1I	CMGCKG	3 cut(s)	821, 1001, 1165
MspI	CCGG	2 cut(s)	315, 1412
MspR9I	CCNGG	2 cut(s)	549, 1338
Mva1269I	GAATGC	4 cut(s)	406, 631, 1113, 1775
MvaI	CCWGG	2 cut(s)	549, 1338
MvnI	CGCG	2 cut(s)	406, 1560
MwoI	GCNNNNNNNGC	4 cut(s)	31, 412, 902, 998
NdeI	CATATG	1 cut(s)	1156
NdeII	GATC	9 cut(s)	129, 286, 583, 868, 889, 931, 978, 1480, 1684
NlaIII	CATG	7 cut(s)	233, 314, 440, 709, 1492, 1803, 1880
NlaIV	GGNNCC	2 cut(s)	368, 1320
NmuCI	GTSAC	4 cut(s)	439, 1175, 1340, 1809
NspI	RCATGY	1 cut(s)	709
PagI	TCATGA	1 cut(s)	229
PciSI	GCTCTTC	2 cut(s)	121, 1656
PcsI	WCGNNNNNNNCGW	1 cut(s)	286
PctI	GAATGC	4 cut(s)	406, 631, 1113, 1775
PdmI	GAANNNNTTC	2 cut(s)	389, 1095
PfeI	GAWTC	6 cut(s)	390, 683, 1202, 1220, 1524, 1583
PkrI	GCNGC	7 cut(s)	823, 994, 997, 1000, 1642, 1824, 1837
PleI	GAGTC	3 cut(s)	163, 1034, 1381
PmaCI	CACGTG	1 cut(s)	1325
PmlI	CACGTG	1 cut(s)	1325
PpsI	GAGTC	3 cut(s)	163, 1034, 1381
Ppu21I	YACGTR	3 cut(s)	950, 1325, 1649
PpuMI	RGGWCCY	1 cut(s)	1054
PsiI	TTATAA	1 cut(s)	1140
Psp5II	RGGWCCY	1 cut(s)	1054
Psp6I	CCWGG	2 cut(s)	547, 1336
PspCI	CACGTG	1 cut(s)	1325
PspFI	CCCAGC	1 cut(s)	572
PspGI	CCWGG	2 cut(s)	547, 1336
PspN4I	GGNNCC	2 cut(s)	368, 1320
PspPI	GGNCC	1 cut(s)	1054
PspPPI	RGGWCCY	1 cut(s)	1054
PstI	CTGCAG	3 cut(s)	826, 1000, 1713
PstNI	CAGNNNCTG	1 cut(s)	1708
PsuI	RGATCY	1 cut(s)	868
PvuII	CAGCTG	3 cut(s)	821, 1001, 1165
RsaI	GTAC	3 cut(s)	225, 1108, 1881
RsaNI	GTAC	3 cut(s)	224, 1107, 1880
RseI	CAYNNNNRTG	2 cut(s)	125, 1619
SapI	GCTCTTC	2 cut(s)	121, 1656
SaqAI	TTAA	3 cut(s)	719, 771, 1292
SatI	GCNGC	7 cut(s)	822, 993, 996, 999, 1641, 1823, 1836
Sau3AI	GATC	9 cut(s)	129, 286, 583, 868, 889, 931, 978, 1480, 1684
Sau96I	GGNCC	1 cut(s)	1054
ScaI	AGTACT	1 cut(s)	225
SchI	GAGTC	3 cut(s)	164, 1034, 1382
ScrFI	CCNGG	2 cut(s)	549, 1338
SduI	GDGCHC	3 cut(s)	246, 348, 1772
SexAI	ACCWGGT	1 cut(s)	1336
SfaNI	GCATC	3 cut(s)	206, 1234, 1586
SfcI	CTRYAG	4 cut(s)	822, 996, 1255, 1709
SinI	GGWCC	1 cut(s)	1054
SmiMI	CAYNNNNRTG	2 cut(s)	125, 1619
SmlI	CTYRAG	3 cut(s)	1083, 1211, 1589
SmoI	CTYRAG	3 cut(s)	1083, 1211, 1589
SnaBI	TACGTA	2 cut(s)	950, 1649
SsiI	CCGC	3 cut(s)	1150, 1807, 1835
StyD4I	CCNGG	2 cut(s)	547, 1336
TaaI	ACNGT	7 cut(s)	47, 329, 677, 698, 716, 1036, 1751
TaiI	ACGT	4 cut(s)	952, 1327, 1651, 1699
TaqI	TCGA	6 cut(s)	144, 289, 469, 688, 888, 1540
TatI	WGTACW	3 cut(s)	223, 1106, 1879
TauI	GCSGC	1 cut(s)	1838
TfiI	GAWTC	6 cut(s)	390, 683, 1202, 1220, 1524, 1583
Tru1I	TTAA	3 cut(s)	719, 771, 1292
Tru9I	TTAA	3 cut(s)	719, 771, 1292
TscAI	CASTG	5 cut(s)	719, 1246, 1756, 1777, 1792
TseFI	GTSAC	4 cut(s)	439, 1175, 1340, 1809
TseI	GCWGC	6 cut(s)	821, 992, 995, 998, 1640, 1822
Tsp45I	GTSAC	4 cut(s)	439, 1175, 1340, 1809
TspRI	CASTG	5 cut(s)	719, 1246, 1756, 1777, 1792
VneI	GTGCAC	2 cut(s)	242, 1768
VpaK11BI	GGWCC	1 cut(s)	1054
XagI	CCTNNNNNAGG	1 cut(s)	1214
XapI	RAATTY	7 cut(s)	360, 432, 620, 954, 1716, 1847, 1913
XceI	RCATGY	1 cut(s)	709
XmiI	GTMKAC	1 cut(s)	1311
XmnI	GAANNNNTTC	2 cut(s)	389, 1095
ZrmI	AGTACT	1 cut(s)	225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.