Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000007.1

Orthogroup ID

OG0002601

Physical Location & Seq

Genomic Coordinates Reverse (-)

177858 .. 185023

Gene Structure 7166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000007.1_g000030.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

atgctacatgatgatatatccaaaatacagcttgagttggttccgatgattcaagaaatcatttatgagtggcttctcttacatttctttgccaccacaccatctgaatcagctgcaattgaagatttcagctctcaactttcattgttacaaattgatagcaacacaggcagaagatcatggaatgagaagcttgggaagtgcgagttcactctggcttttatattcttacttaatgttagaagttcctccaaagaccagagccacttttgttcaagaagcatatcaaatgttcaggacataattgattcaatacgagaatttgctagctggatcatgtggggccagaatggggaatcccttactgtcctgaggcgtgcagcggatcttgcattgatcctgctaaggcacgggcagtatgatgctgttgagcacctactcactattgtggaggcacatttacaaaaggagaagacttctcatcgtgttcaagctacagatggcggatggtgcatactgcatcatcttttaggatgctgttatcttgctcaagcacatcgtggattacatggggtcctgaaagagaggaaagttcatgaagctgtatgttgtttcttcagagctgcatctggaaacggctcagctcaggctttacaaagcttgcctcaggaagcggggttgccacatcttggcatcgatggtagcatatcagatgctgcatggaagctccattactatcagtgggcaatgcagatatttgagcaatataatattagtgaaggtgcatgtcagtttgctcttgctgcgcttgagcaagttgaggaagcgtatagtgcaaacactgagtcccatgacagagctccatttgatgaatcagtatctaccattaaaggaagactttgggcacatgtttgcaagtttactttagatctcaatctcttttatgatgcgtactgtgcaataatttcaaatccagatgaggagagcaagcacatctggttgaggcgtcttataattgttctttatgaacgtggtgccataaagattctttgtggtggtcagctaccattcattggtcttacagagaaggtagaacaagagcttgcatggaaggcagagcggtcagacattttagcaaggccaaacttatataagttgctttatgcattcgaaatgcatcggcataactggcgaaaagcagcaagctacatgtacctttattctgctcgtttgagaactgaaacatctctgaaagggtaccagcaattgtggcgagcactgaaggagatactgaatgggctctctgctgctatcaacgcacttcatcttgttcatccagcatatgcttggattgatcctctccttgagagaaatgctattcacaatgagcagtatccaagtaaaaaggctagaataacaattgaagaccagtcagcaagcaatgatgttgatcctcaaagttggaaatcttatatagatattcagaaaattgaaaacgagtttgtgcttacttcagcagaatatttgctttcactagcacatgtcaaatggacaaatacaggaacccagaaagcaccattggagttggttgatctcttgatccagacaaatctatatgatatggcatttacagttctcttaagattcttcaaaggttcagagttaaagaggggattggaaagagttttctctgctatgtcactaaaatgctgtccgcatatagttaattcttcaagggtcggggatgattccacaacacagggtcttctgttgacttcttcaaaggatgaagtgatcgttcatggttcaccagatacaagttcagcaaatcaacaatccagtggaattaatcaatggggaactctcgagctctatcttgaccgatataaagtcttccatgcacgtctaccatttattgttgctgaaactcttcttcgtacggattctcaaatcgaactgcctctttggttggttaaattattcaaggatggcaggagggaaaagacattggggatgactggccaagaatcaagtccggcattattatttcaactatatgttgattatggtcgatatagagaagctacgaatctgttgcttgagtacataggttctttagcatccatgagaccagccaacatcattaatcgtaaaagaccatttggagtttggtttccatatacaacaattcagcgcctctggtgccgacttgaggaaatgataaattcaggtcacatggtagatcaatgtaagcagctcaaggatttgctacatggagctttgctgaaacatctccaactggtaaaagtggactcggaagatgcacttgagtcatttcagaaaataagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008104 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0010467 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016973 GO:0031090 GO:0031503 GO:0031965 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0034613 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

DUF5311 Nup160

Protein Analysis

783

Amino Acids

89.43

Weight (kDa)

6.43

Isoelectric Point (pI)

43.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002601)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33410 AT1G33410
fragaria_vesca	FvH4_6g26400 FvH4_6g26400 FvH4_6g26400 FvH4_6g26400 FvH4_6g26400 FvH4_6g26400 FvH4_6g26400
malus_domestica	MD00G1034800.v1.1 MD05G1063300.v1.1 MD05G1161100.v1.1 MD05G1162300.v1.1 MD05G1162400.v1.1 MD07G1280900.v1.1 MD08G1158600.v1.1 MD10G1009800.v1.1 MD10G1160000.v1.1
prunus_persica	Prupe.5G022000_v2.0.a1
pyrus_communis	pycom10g00600
rosa_chinensis	RchiOBHm_Chr2g0126921 RchiOBHm_Chr4g0402211
rosa_laevigata	RLG00000009106 RLG00000018928
rosa_multiflora	Rmu_sc0000007.1_g000030 Rmu_sc0001405.1_g000051
rosa_roxburghii	Rroxscaffold_1G00047890 Rroxscaffold_2G00116920 Rroxscaffold_5G00346940
rosa_rugosa	Rorug02G0270100 Rorug02G0270200
rosa_samantha	Rh2AG322500 Rh2BG330700 Rh2CG310600 Rh2DG350000 Rh4BG104100 Rh4CG117900 Rh4DG101500
rosa_wichuraiana	Rw2G026160 Rw4G008910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1013
Acc65I	GGTACC	1 cut(s)	1257
AccB1I	GGYRCC	3 cut(s)	1034, 1257, 2202
AccB7I	CCANNNNNTGG	2 cut(s)	689, 1073
AccBSI	CCGCTC	1 cut(s)	1120
AccI	GTMKAC	1 cut(s)	1906
AciI	CCGC	5 cut(s)	383, 504, 674, 1120, 1715
AclWI	GGATC	6 cut(s)	341, 391, 393, 1349, 1445, 1594
AcoI	YGGCCR	1 cut(s)	2020
AcsI	RAATTY	2 cut(s)	320, 2224
AcuI	CTGAAG	3 cut(s)	601, 1301, 1497
AcyI	GRCGYC	1 cut(s)	1006
AdeI	CACNNNGTG	1 cut(s)	560
AfaI	GTAC	5 cut(s)	953, 1214, 1259, 1939, 2105
AfiI	CCNNNNNNNGG	4 cut(s)	352, 689, 1073, 2212
AflII	CTTAAG	1 cut(s)	1639
AflIII	ACRYGT	3 cut(s)	907, 1209, 1540
AjiI	CACGTC	1 cut(s)	1904
AjuI	GAANNNNNNNTTGG	2 cut(s)	1562, 1594
AleI	CACNNNNGTG	1 cut(s)	446
Alw21I	GWGCWC	4 cut(s)	435, 862, 1279, 1872
Alw26I	GTCTC	1 cut(s)	2122
AlwI	GGATC	6 cut(s)	341, 391, 393, 1349, 1445, 1594
AlwNI	CAGNNNCTG	1 cut(s)	716
Ama87I	CYCGRG	1 cut(s)	1865
AoxI	GGCC	3 cut(s)	343, 1139, 2020
ApeKI	GCWGC	8 cut(s)	113, 380, 623, 716, 803, 1199, 1307, 2254
ApoI	RAATTY	2 cut(s)	320, 2224
ArsI	GACNNNNNNTTYG	2 cut(s)	830, 862
AseI	ATTAAT	2 cut(s)	1848, 2145
Asp700I	GAANNNNTTC	1 cut(s)	1929
Asp718I	GGTACC	1 cut(s)	1257
AspLEI	GCGC	2 cut(s)	808, 2196
AspS9I	GGNCC	2 cut(s)	343, 574
AsuHPI	GGTGA	1 cut(s)	1800
AsuII	TTCGAA	1 cut(s)	1170
AsuNHI	GCTAGC	1 cut(s)	326
AvaI	CYCGRG	1 cut(s)	1865
AvaII	GGWCC	1 cut(s)	574
AxyI	CCTNAGG	2 cut(s)	371, 666
BaeGI	GKGCMC	1 cut(s)	907
BalI	TGGCCA	1 cut(s)	2022
BanI	GGYRCC	3 cut(s)	1034, 1257, 2202
BanII	GRGCYC	3 cut(s)	862, 1302, 1872
BarI	GAAGNNNNNNTAC	2 cut(s)	716, 748
BbsI	GAAGAC	5 cut(s)	479, 901, 1431, 1757, 1885
Bbv12I	GWGCWC	4 cut(s)	435, 862, 1279, 1872
BbvI	GCAGC	8 cut(s)	100, 392, 610, 703, 790, 1211, 1294, 2266
BccI	CCATC	5 cut(s)	109, 494, 501, 692, 1982
BceAI	ACGGC	1 cut(s)	652
BcgI	CGANNNNNNTGC	2 cut(s)	2077, 2111
BciVI	GTATCC	1 cut(s)	1404
BcoDI	GTCTC	1 cut(s)	2122
BfaI	CTAG	3 cut(s)	327, 1410, 1535
BfmI	CTRYAG	1 cut(s)	495
BfoI	RGCGCY	1 cut(s)	2197
BfrI	CTTAAG	1 cut(s)	1639
BfuI	GTATCC	1 cut(s)	1404
BglII	AGATCT	1 cut(s)	928
BisI	GCNGC	8 cut(s)	114, 381, 624, 717, 804, 1200, 1308, 2255
BlpI	GCTNAGC	1 cut(s)	640
BlsI	GCNGC	8 cut(s)	115, 382, 625, 718, 805, 1201, 1309, 2256
Bme18I	GGWCC	1 cut(s)	574
BmeT110I	CYCGRG	1 cut(s)	1865
BmgBI	CACGTC	1 cut(s)	1904
BmgT120I	GGNCC	2 cut(s)	343, 574
BmiI	GGNNCC	7 cut(s)	42, 344, 575, 1036, 1259, 1564, 2204
BmtI	GCTAGC	1 cut(s)	330
BpiI	GAAGAC	5 cut(s)	479, 901, 1431, 1757, 1885
Bpu10I	CCTNAGC	2 cut(s)	404, 645
Bpu1102I	GCTNAGC	1 cut(s)	640
Bpu14I	TTCGAA	1 cut(s)	1170
BpuEI	CTTGAG	8 cut(s)	53, 534, 830, 1385, 2120, 2231, 2243, 2348
Bsa29I	ATCGAT	1 cut(s)	696
BsaBI	GATNNNNATC	2 cut(s)	933, 1449
BsaHI	GRCGYC	1 cut(s)	1006
BsaI	GGTCTC	1 cut(s)	2122
Bsc4I	CCNNNNNNNGG	4 cut(s)	352, 689, 1073, 2212
Bse1I	ACTGG	5 cut(s)	1193, 1429, 1839, 2023, 2304
Bse21I	CCTNAGG	2 cut(s)	371, 666
Bse3DI	GCAATG	2 cut(s)	753, 1447
Bse8I	GATNNNNATC	2 cut(s)	933, 1449
BseCI	ATCGAT	1 cut(s)	696
BseGI	GGATG	8 cut(s)	512, 539, 1333, 1750, 1792, 1993, 2019, 2120
BseJI	GATNNNNATC	2 cut(s)	933, 1449
BseLI	CCNNNNNNNGG	4 cut(s)	352, 689, 1073, 2212
BseMI	GCAATG	2 cut(s)	753, 1447
BseMII	CTCAG	5 cut(s)	362, 654, 659, 680, 834
BseNI	ACTGG	5 cut(s)	1193, 1429, 1839, 2023, 2304
BseRI	GAGGAG	1 cut(s)	995
BseSI	GKGCMC	1 cut(s)	907
BseXI	GCAGC	8 cut(s)	100, 392, 610, 703, 790, 1211, 1294, 2266
BsgI	GTGCAG	1 cut(s)	399
BshFI	GGCC	3 cut(s)	345, 1141, 2022
BshNI	GGYRCC	3 cut(s)	1034, 1257, 2202
BshVI	ATCGAT	1 cut(s)	696
BsiHKAI	GWGCWC	4 cut(s)	435, 862, 1279, 1872
BsiHKCI	CYCGRG	1 cut(s)	1865
BsiSI	CCGG	1 cut(s)	2036
BsiWI	CGTACG	1 cut(s)	1937
BslFI	GGGAC	1 cut(s)	832
BslI	CCNNNNNNNGG	4 cut(s)	352, 689, 1073, 2212
BsmAI	GTCTC	1 cut(s)	2122
BsmFI	GGGAC	1 cut(s)	832
BsmI	GAATGC	1 cut(s)	1166
BsnI	GGCC	3 cut(s)	345, 1141, 2022
Bso31I	GGTCTC	1 cut(s)	2122
BsoBI	CYCGRG	1 cut(s)	1865
Bsp119I	TTCGAA	1 cut(s)	1170
Bsp1286I	GDGCHC	6 cut(s)	435, 862, 907, 1279, 1302, 1872
Bsp1720I	GCTNAGC	1 cut(s)	640
BspACI	CCGC	5 cut(s)	383, 504, 674, 1120, 1715
BspANI	GGCC	3 cut(s)	345, 1141, 2022
BspCNI	CTCAG	5 cut(s)	363, 653, 658, 679, 835
BspDI	ATCGAT	1 cut(s)	696
BspHI	TCATGA	1 cut(s)	595
BspLI	GGNNCC	7 cut(s)	42, 344, 575, 1036, 1259, 1564, 2204
BspOI	GCTAGC	1 cut(s)	330
BspPI	GGATC	6 cut(s)	341, 391, 393, 1349, 1445, 1594
BspT104I	TTCGAA	1 cut(s)	1170
BspT107I	GGYRCC	3 cut(s)	1034, 1257, 2202
BspTI	CTTAAG	1 cut(s)	1639
BspTNI	GGTCTC	1 cut(s)	2122
BsrBI	CCGCTC	1 cut(s)	1120
BsrDI	GCAATG	2 cut(s)	753, 1447
BsrI	ACTGG	5 cut(s)	1193, 1429, 1839, 2023, 2304
BssNI	GRCGYC	1 cut(s)	1006
Bst4CI	ACNGT	3 cut(s)	367, 956, 1633
Bst6I	CTCTTC	1 cut(s)	1935
BstACI	GRCGYC	1 cut(s)	1006
BstAFI	CTTAAG	1 cut(s)	1639
BstBI	TTCGAA	1 cut(s)	1170
BstC8I	GCNNGC	8 cut(s)	328, 378, 662, 989, 1104, 1204, 1275, 1438
BstDEI	CTNAG	6 cut(s)	371, 404, 640, 645, 666, 843
BstF5I	GGATG	8 cut(s)	512, 539, 1333, 1750, 1792, 1993, 2019, 2120
BstH2I	RGCGCY	1 cut(s)	2197
BstHHI	GCGC	2 cut(s)	808, 2196
BstMAI	GTCTC	1 cut(s)	2122
BstNSI	RCATGY	4 cut(s)	789, 911, 1213, 1544
BstSFI	CTRYAG	1 cut(s)	495
BstSLI	GKGCMC	1 cut(s)	907
BstV1I	GCAGC	8 cut(s)	100, 392, 610, 703, 790, 1211, 1294, 2266
BstV2I	GAAGAC	5 cut(s)	479, 901, 1431, 1757, 1885
BstX2I	RGATCY	2 cut(s)	385, 928
BstYI	RGATCY	2 cut(s)	385, 928
Bsu15I	ATCGAT	1 cut(s)	696
Bsu36I	CCTNAGG	2 cut(s)	371, 666
BsuI	GTATCC	1 cut(s)	1404
BsuRI	GGCC	3 cut(s)	345, 1141, 2022
BsuTUI	ATCGAT	1 cut(s)	696
BtrI	CACGTC	1 cut(s)	1904
BtsCI	GGATG	8 cut(s)	512, 539, 1333, 1750, 1792, 1993, 2019, 2120
BtsIMutI	CAGTG	4 cut(s)	746, 840, 1277, 1846
Cac8I	GCNNGC	8 cut(s)	328, 378, 662, 989, 1104, 1204, 1275, 1438
CaiI	CAGNNNCTG	1 cut(s)	716
CciI	TCATGA	1 cut(s)	595
CfoI	GCGC	2 cut(s)	808, 2196
Cfr13I	GGNCC	2 cut(s)	343, 574
ClaI	ATCGAT	1 cut(s)	696
CseI	GACGC	1 cut(s)	995
Csp6I	GTAC	5 cut(s)	952, 1213, 1258, 1938, 2104
CviQI	GTAC	5 cut(s)	952, 1213, 1258, 1938, 2104
DdeI	CTNAG	6 cut(s)	371, 404, 640, 645, 666, 843
DraIII	CACNNNGTG	1 cut(s)	560
EaeI	YGGCCR	1 cut(s)	2020
Eam1104I	CTCTTC	1 cut(s)	1935
EarI	CTCTTC	1 cut(s)	1935
EciI	GGCGGA	1 cut(s)	519
Ecl136II	GAGCTC	2 cut(s)	860, 1870
Eco24I	GRGCYC	3 cut(s)	862, 1302, 1872
Eco31I	GGTCTC	1 cut(s)	2122
Eco47I	GGWCC	1 cut(s)	574
Eco53kI	GAGCTC	2 cut(s)	860, 1870
Eco57I	CTGAAG	3 cut(s)	601, 1301, 1497
Eco81I	CCTNAGG	2 cut(s)	371, 666
Eco88I	CYCGRG	1 cut(s)	1865
EcoICRI	GAGCTC	2 cut(s)	860, 1870
EcoO109I	RGGNCCY	1 cut(s)	574
EcoT22I	ATGCAT	2 cut(s)	1168, 1179
EcoT38I	GRGCYC	3 cut(s)	862, 1302, 1872
FalI	AAGNNNNNCTT	4 cut(s)	882, 914, 2310, 2342
FaqI	GGGAC	1 cut(s)	832
FauI	CCCGC	1 cut(s)	667
FauNDI	CATATG	1 cut(s)	1342
FblI	GTMKAC	1 cut(s)	1906
Fnu4HI	GCNGC	8 cut(s)	114, 381, 624, 717, 804, 1200, 1308, 2255
FokI	GGATG	8 cut(s)	519, 546, 1320, 1757, 1799, 2000, 2026, 2107
FriOI	GRGCYC	3 cut(s)	862, 1302, 1872
Fsp4HI	GCNGC	8 cut(s)	114, 381, 624, 717, 804, 1200, 1308, 2255
FspBI	CTAG	3 cut(s)	327, 1410, 1535
GlaI	GCGC	2 cut(s)	807, 2195
GluI	GCNGC	8 cut(s)	114, 381, 624, 717, 804, 1200, 1308, 2255
HaeII	RGCGCY	1 cut(s)	2197
HaeIII	GGCC	3 cut(s)	345, 1141, 2022
HapII	CCGG	1 cut(s)	2036
HgaI	GACGC	1 cut(s)	995
HhaI	GCGC	2 cut(s)	808, 2196
Hin1I	GRCGYC	1 cut(s)	1006
Hin6I	GCGC	2 cut(s)	806, 2194
HinP1I	GCGC	2 cut(s)	806, 2194
HincII	GTYRAC	1 cut(s)	1773
HindII	GTYRAC	1 cut(s)	1773
HindIII	AAGCTT	2 cut(s)	191, 658
HpaII	CCGG	1 cut(s)	2036
HphI	GGTGA	1 cut(s)	1800
Hpy166II	GTNNAC	6 cut(s)	210, 921, 1773, 1808, 1907, 2311
Hpy8I	GTNNAC	6 cut(s)	210, 921, 1773, 1808, 1907, 2311
HpyAV	CCTTC	4 cut(s)	773, 1081, 1105, 1276
HpyCH4III	ACNGT	3 cut(s)	367, 956, 1633
HpyCH4IV	ACGT	2 cut(s)	1030, 1903
HpyF3I	CTNAG	6 cut(s)	371, 404, 640, 645, 666, 843
HpySE526I	ACGT	2 cut(s)	1030, 1903
Hsp92I	GRCGYC	1 cut(s)	1006
HspAI	GCGC	2 cut(s)	806, 2194
KpnI	GGTACC	1 cut(s)	1261
LmnI	GCTCC	3 cut(s)	732, 865, 2276
Lsp1109I	GCAGC	8 cut(s)	100, 392, 610, 703, 790, 1211, 1294, 2266
MaeI	CTAG	3 cut(s)	327, 1410, 1535
MaeII	ACGT	2 cut(s)	1030, 1903
MaeIII	GTNAC	3 cut(s)	147, 1698, 2231
MbiI	CCGCTC	1 cut(s)	1120
MfeI	CAATTG	3 cut(s)	117, 1265, 1419
MflI	RGATCY	2 cut(s)	385, 928
MhlI	GDGCHC	6 cut(s)	435, 862, 907, 1279, 1302, 1872
MlsI	TGGCCA	1 cut(s)	2022
MluNI	TGGCCA	1 cut(s)	2022
MlyI	GAGTC	3 cut(s)	854, 2306, 2339
MmeI	TCCRAC	2 cut(s)	1442, 2320
Mox20I	TGGCCA	1 cut(s)	2022
Mph1103I	ATGCAT	2 cut(s)	1168, 1179
MroXI	GAANNNNTTC	1 cut(s)	1929
MscI	TGGCCA	1 cut(s)	2022
MseI	TTAA	8 cut(s)	234, 888, 1640, 1664, 1725, 1848, 1974, 2145
MslI	CAYNNNNRTG	2 cut(s)	446, 1705
Msp20I	TGGCCA	1 cut(s)	2022
MspA1I	CMGCKG	2 cut(s)	113, 383
MspCI	CTTAAG	1 cut(s)	1639
MspI	CCGG	1 cut(s)	2036
MunI	CAATTG	3 cut(s)	117, 1265, 1419
Mva1269I	GAATGC	1 cut(s)	1166
NdeI	CATATG	1 cut(s)	1342
NheI	GCTAGC	1 cut(s)	326
NlaIV	GGNNCC	7 cut(s)	42, 344, 575, 1036, 1259, 1564, 2204
NmuCI	GTSAC	2 cut(s)	1698, 2231
NsiI	ATGCAT	2 cut(s)	1168, 1179
NspI	RCATGY	4 cut(s)	789, 911, 1213, 1544
NspV	TTCGAA	1 cut(s)	1170
OliI	CACNNNNGTG	1 cut(s)	446
PaeR7I	CTCGAG	1 cut(s)	1865
PagI	TCATGA	1 cut(s)	595
PciI	ACATGT	3 cut(s)	907, 1209, 1540
PctI	GAATGC	1 cut(s)	1166
PdmI	GAANNNNTTC	1 cut(s)	1929
Pfl23II	CGTACG	1 cut(s)	1937
PflMI	CCANNNNNTGG	2 cut(s)	689, 1073
PkrI	GCNGC	8 cut(s)	115, 382, 625, 718, 805, 1201, 1309, 2256
PleI	GAGTC	3 cut(s)	853, 2306, 2338
PpsI	GAGTC	3 cut(s)	853, 2306, 2338
PpuMI	RGGWCCY	1 cut(s)	574
PscI	ACATGT	3 cut(s)	907, 1209, 1540
PshBI	ATTAAT	2 cut(s)	1848, 2145
PsiI	TTATAA	1 cut(s)	1013
Psp124BI	GAGCTC	2 cut(s)	862, 1872
Psp5II	RGGWCCY	1 cut(s)	574
PspLI	CGTACG	1 cut(s)	1937
PspN4I	GGNNCC	7 cut(s)	42, 344, 575, 1036, 1259, 1564, 2204
PspPI	GGNCC	2 cut(s)	343, 574
PspPPI	RGGWCCY	1 cut(s)	574
PstNI	CAGNNNCTG	1 cut(s)	716
PsuI	RGATCY	2 cut(s)	385, 928
PvuII	CAGCTG	1 cut(s)	113
RsaI	GTAC	5 cut(s)	953, 1214, 1259, 1939, 2105
RsaNI	GTAC	5 cut(s)	952, 1213, 1258, 1938, 2104
RseI	CAYNNNNRTG	2 cut(s)	446, 1705
SacI	GAGCTC	2 cut(s)	862, 1872
SaqAI	TTAA	8 cut(s)	234, 888, 1640, 1664, 1725, 1848, 1974, 2145
SatI	GCNGC	8 cut(s)	114, 381, 624, 717, 804, 1200, 1308, 2255
Sau96I	GGNCC	2 cut(s)	343, 574
SchI	GAGTC	3 cut(s)	854, 2306, 2339
SduI	GDGCHC	6 cut(s)	435, 862, 907, 1279, 1302, 1872
SfcI	CTRYAG	1 cut(s)	495
Sfr274I	CTCGAG	1 cut(s)	1865
SfuI	TTCGAA	1 cut(s)	1170
SinI	GGWCC	1 cut(s)	574
SlaI	CTCGAG	1 cut(s)	1865
SmiMI	CAYNNNNRTG	2 cut(s)	446, 1705
SsiI	CCGC	5 cut(s)	383, 504, 674, 1120, 1715
SspI	AATATT	2 cut(s)	772, 1523
SspMI	CTAG	3 cut(s)	327, 1410, 1535
SstI	GAGCTC	2 cut(s)	862, 1872
TaaI	ACNGT	3 cut(s)	367, 956, 1633
TaiI	ACGT	2 cut(s)	1033, 1906
TaqI	TCGA	5 cut(s)	696, 1170, 1866, 1953, 2071
TaqII	GACCGA	1 cut(s)	1896
TatI	WGTACW	1 cut(s)	2103
Tru1I	TTAA	8 cut(s)	234, 888, 1640, 1664, 1725, 1848, 1974, 2145
Tru9I	TTAA	8 cut(s)	234, 888, 1640, 1664, 1725, 1848, 1974, 2145
TscAI	CASTG	4 cut(s)	746, 847, 1284, 1846
TseFI	GTSAC	2 cut(s)	1698, 2231
TseI	GCWGC	8 cut(s)	113, 380, 623, 716, 803, 1199, 1307, 2254
Tsp45I	GTSAC	2 cut(s)	1698, 2231
TspGWI	ACGGA	1 cut(s)	1955
TspRI	CASTG	4 cut(s)	746, 847, 1284, 1846
Van91I	CCANNNNNTGG	2 cut(s)	689, 1073
Vha464I	CTTAAG	1 cut(s)	1639
VpaK11BI	GGWCC	1 cut(s)	574
VspI	ATTAAT	2 cut(s)	1848, 2145
XapI	RAATTY	2 cut(s)	320, 2224
XceI	RCATGY	4 cut(s)	789, 911, 1213, 1544
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1344, 2166
XhoI	CTCGAG	1 cut(s)	1865
XmiI	GTMKAC	1 cut(s)	1906
XmnI	GAANNNNTTC	1 cut(s)	1929
XspI	CTAG	3 cut(s)	327, 1410, 1535
Zsp2I	ATGCAT	2 cut(s)	1168, 1179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.