Rmu_sc0000745.1_g000026

Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000745.1
Physical Location & Seq
Forward (+)
93043 .. 95764
2722 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000745.1_g000026.1.cds

Sequence Viewer

Length: 1188 bp
atgtatgctgatggcattaactgggatgatcttgggtttggactgattccaatcgattacatgtacaccatgaaatgctctgacggagaaagcttttcacaaggacatctctctccctttggaaagattgagctttgcccatctgctggaatattgaattatggacagggactattcgaaggtcttaaggcgaccagaaaagaagatggtcgtattatgctgtttcggccccaagagaatgctctaagaatgaagatgggtgcagagagaatgtgcatgccatctccatccgttgagcaatttgttgatgctgtgaagcaaacagtcttcgccaacaagcgttgggtaccacctccaggaaaaggatcactgtatattaggcctttgctcgtggggagtggatctaatctgggcttgggcccgggactggagtatacattcctaatatttgcttctccggttggtaattatcacaagggaagggcagccctcaatttgtatgttgagcataaaatccacagagctactcctggtggaactggaggtgtcaagtccgtcaccaattactcacctgtttaccaaacacaacagcaagcaagggccaaggggttctctgatgtcttattcctagattctgctactggtaaaaacattgaggagattgtagcagctaacattttcattctgaagggtaatgtcatttcaacaccaacactgaaacatggaactatcctccctggagtaacccgtaaaagcatcattgacattgcccttgattttggttaccaggtggaggagcgtgtgatcccagtggaggatttacttgcagccgatgaagctttctgcacaggaactgccgtggttgtcaaccctattggcgctgtaacttatcaagacaagagggttgaatacacaacaggaggagcattatgtcagaaactgtatgaaacgctaacaggaatccaaacaggtcgtcttgaggacaagaagggatggaccctagagagccccactgggcttgagatgaaaaagcagcagctttgtgtgacttactacagcaagcattgtggcaacagaaaatacatgcaacctttaatacctcgcttcgatggtcactactcattacgacgattggagtatgttaatggagaatttcttcacgtccaaggagtattggggcctcagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

395

Amino Acids

43.55

Weight (kDa)

8.51

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 346
AccB1I GGYRCC 1 cut(s) 346
AccB7I CCANNNNNTGG 1 cut(s) 146
AccI GTMKAC 1 cut(s) 434
AclWI GGATC 3 cut(s) 373, 409, 799
AcsI RAATTY 1 cut(s) 1151
AcuI CTGAAG 1 cut(s) 707
AfaI GTAC 2 cut(s) 65, 348
AfiI CCNNNNNNNGG 6 cut(s) 146, 356, 362, 427, 793, 814
AflII CTTAAG 1 cut(s) 185
AflIII ACRYGT 1 cut(s) 60
AgsI TTSAA 3 cut(s) 157, 705, 908
AjiI CACGTC 1 cut(s) 1162
AjnI CCWGG 4 cut(s) 355, 529, 736, 786
AluBI AGCT 6 cut(s) 93, 133, 524, 671, 839, 1039
AluI AGCT 6 cut(s) 93, 133, 524, 671, 839, 1039
AlwI GGATC 3 cut(s) 373, 409, 799
AlwNI CAGNNNCTG 2 cut(s) 854, 940
Ama87I CYCGRG 1 cut(s) 421
AoxI GGCC 5 cut(s) 227, 380, 418, 600, 1178
ApaI GGGCCC 1 cut(s) 422
ApeKI GCWGC 5 cut(s) 485, 668, 827, 1033, 1036
ApoI RAATTY 1 cut(s) 1151
ArsI GACNNNNNNTTYG 2 cut(s) 958, 990
Asp700I GAANNNNTTC 1 cut(s) 1155
Asp718I GGTACC 1 cut(s) 346
AspLEI GCGC 1 cut(s) 881
AspS9I GGNCC 6 cut(s) 228, 418, 419, 600, 996, 1178
AsuC2I CCSGG 2 cut(s) 422, 423
AsuHPI GGTGA 2 cut(s) 550, 561
AsuII TTCGAA 1 cut(s) 177
AvaI CYCGRG 1 cut(s) 421
AvaII GGWCC 1 cut(s) 996
BaeGI GKGCMC 1 cut(s) 422
BanI GGYRCC 1 cut(s) 346
BanII GRGCYC 2 cut(s) 422, 1010
BauI CACGAG 1 cut(s) 389
BbsI GAAGAC 1 cut(s) 319
BbvI GCAGC 5 cut(s) 497, 680, 839, 1045, 1048
BccI CCATC 8 cut(s) 5, 148, 200, 250, 289, 295, 987, 1103
BceAI ACGGC 1 cut(s) 842
BciT130I CCWGG 4 cut(s) 357, 531, 738, 788
BcnI CCSGG 2 cut(s) 422, 423
BfaI CTAG 2 cut(s) 629, 1001
BfmI CTRYAG 1 cut(s) 1054
BfoI RGCGCY 1 cut(s) 882
BfrI CTTAAG 1 cut(s) 185
BisI GCNGC 5 cut(s) 486, 669, 828, 1034, 1037
BlsI GCNGC 5 cut(s) 487, 670, 829, 1035, 1038
Bme1390I CCNGG 6 cut(s) 357, 422, 423, 531, 738, 788
Bme18I GGWCC 1 cut(s) 996
BmeT110I CYCGRG 1 cut(s) 421
BmgBI CACGTC 1 cut(s) 1162
BmgT120I GGNCC 6 cut(s) 228, 418, 419, 600, 996, 1178
BmiI GGNNCC 5 cut(s) 230, 348, 420, 998, 1179
BmrFI CCNGG 6 cut(s) 357, 422, 423, 531, 738, 788
BmrI ACTGGG 3 cut(s) 31, 803, 1023
BmsI GCATC 2 cut(s) 298, 765
BmuI ACTGGG 3 cut(s) 31, 803, 1023
BpiI GAAGAC 1 cut(s) 319
BpmI CTGGAG 4 cut(s) 339, 449, 561, 759
Bpu14I TTCGAA 1 cut(s) 177
BpuEI CTTGAG 2 cut(s) 998, 1040
BpuMI CCSGG 2 cut(s) 422, 423
Bsa29I ATCGAT 1 cut(s) 54
BsaBI GATNNNNATC 1 cut(s) 50
BsaJI CCNNGG 5 cut(s) 421, 603, 736, 858, 1165
BsaWI WCCGGW 1 cut(s) 457
Bsc4I CCNNNNNNNGG 6 cut(s) 146, 356, 362, 427, 793, 814
Bse1I ACTGG 6 cut(s) 26, 432, 544, 646, 809, 1018
Bse3DI GCAATG 1 cut(s) 765
Bse8I GATNNNNATC 1 cut(s) 50
BseBI CCWGG 4 cut(s) 357, 531, 738, 788
BseCI ATCGAT 1 cut(s) 54
BseDI CCNNGG 5 cut(s) 421, 603, 736, 858, 1165
BseGI GGATG 3 cut(s) 31, 287, 998
BseJI GATNNNNATC 1 cut(s) 50
BseLI CCNNNNNNNGG 6 cut(s) 146, 356, 362, 427, 793, 814
BseMI GCAATG 1 cut(s) 765
BseNI ACTGG 6 cut(s) 26, 432, 544, 646, 809, 1018
BseRI GAGGAG 3 cut(s) 671, 809, 936
BseSI GKGCMC 1 cut(s) 422
BseXI GCAGC 5 cut(s) 497, 680, 839, 1045, 1048
BsgI GTGCAG 2 cut(s) 282, 829
BshFI GGCC 5 cut(s) 229, 382, 420, 602, 1180
BshNI GGYRCC 1 cut(s) 346
BshVI ATCGAT 1 cut(s) 54
BsiHKCI CYCGRG 1 cut(s) 421
BsiSI CCGG 2 cut(s) 422, 458
BslFI GGGAC 2 cut(s) 183, 438
BslI CCNNNNNNNGG 6 cut(s) 146, 356, 362, 427, 793, 814
BsmFI GGGAC 2 cut(s) 183, 438
BsmI GAATGC 1 cut(s) 244
BsnI GGCC 5 cut(s) 229, 382, 420, 602, 1180
BsoBI CYCGRG 1 cut(s) 421
Bsp119I TTCGAA 1 cut(s) 177
Bsp120I GGGCCC 1 cut(s) 418
Bsp1286I GDGCHC 2 cut(s) 422, 1010
Bsp1407I TGTACA 1 cut(s) 63
Bsp143I GATC 4 cut(s) 28, 365, 401, 804
BspANI GGCC 5 cut(s) 229, 382, 420, 602, 1180
BspDI ATCGAT 1 cut(s) 54
BspLI GGNNCC 5 cut(s) 230, 348, 420, 998, 1179
BspPI GGATC 3 cut(s) 373, 409, 799
BspT104I TTCGAA 1 cut(s) 177
BspT107I GGYRCC 1 cut(s) 346
BspTI CTTAAG 1 cut(s) 185
BsrDI GCAATG 1 cut(s) 765
BsrGI TGTACA 1 cut(s) 63
BsrI ACTGG 6 cut(s) 26, 432, 544, 646, 809, 1018
BssECI CCNNGG 5 cut(s) 421, 603, 736, 858, 1165
BssMI GATC 4 cut(s) 28, 365, 401, 804
BssNAI GTATAC 1 cut(s) 435
BssSI CACGAG 1 cut(s) 389
BssT1I CCWWGG 2 cut(s) 603, 1165
Bst1107I GTATAC 1 cut(s) 435
Bst2BI CACGAG 1 cut(s) 389
Bst2UI CCWGG 4 cut(s) 357, 531, 738, 788
Bst4CI ACNGT 3 cut(s) 325, 372, 942
BstAFI CTTAAG 1 cut(s) 185
BstAUI TGTACA 1 cut(s) 63
BstBI TTCGAA 1 cut(s) 177
BstC8I GCNNGC 3 cut(s) 278, 594, 1061
BstDEI CTNAG 2 cut(s) 245, 1182
BstDSI CCRYGG 1 cut(s) 858
BstEII GGTNACC 1 cut(s) 782
BstF5I GGATG 3 cut(s) 31, 287, 998
BstH2I RGCGCY 1 cut(s) 882
BstHHI GCGC 1 cut(s) 881
BstKTI GATC 4 cut(s) 31, 368, 404, 807
BstMBI GATC 4 cut(s) 28, 365, 401, 804
BstMWI GCNNNNNNNGC 2 cut(s) 226, 836
BstNI CCWGG 4 cut(s) 357, 531, 738, 788
BstNSI RCATGY 3 cut(s) 64, 280, 1087
BstPI GGTNACC 1 cut(s) 782
BstSCI CCNGG 6 cut(s) 355, 420, 421, 529, 736, 786
BstSFI CTRYAG 1 cut(s) 1054
BstSLI GKGCMC 1 cut(s) 422
BstV1I GCAGC 5 cut(s) 497, 680, 839, 1045, 1048
BstV2I GAAGAC 1 cut(s) 319
BstX2I RGATCY 1 cut(s) 401
BstYI RGATCY 1 cut(s) 401
BstZ17I GTATAC 1 cut(s) 435
Bsu15I ATCGAT 1 cut(s) 54
BsuRI GGCC 5 cut(s) 229, 382, 420, 602, 1180
BsuTUI ATCGAT 1 cut(s) 54
BtgI CCRYGG 1 cut(s) 858
BtrI CACGTC 1 cut(s) 1162
BtsCI GGATG 3 cut(s) 31, 287, 998
BtsIMutI CAGTG 4 cut(s) 368, 713, 816, 1011
Cac8I GCNNGC 3 cut(s) 278, 594, 1061
CaiI CAGNNNCTG 2 cut(s) 854, 940
CfoI GCGC 1 cut(s) 881
Cfr13I GGNCC 6 cut(s) 228, 418, 419, 600, 996, 1178
Cfr9I CCCGGG 1 cut(s) 421
ClaI ATCGAT 1 cut(s) 54
CsiI ACCWGGT 1 cut(s) 786
Csp6I GTAC 2 cut(s) 64, 347
CspCI CAANNNNNGTGG 4 cut(s) 1000, 1035, 1048, 1083
CviAII CATG 5 cut(s) 61, 70, 277, 722, 1084
CviQI GTAC 2 cut(s) 64, 347
DdeI CTNAG 2 cut(s) 245, 1182
DpnI GATC 4 cut(s) 30, 367, 403, 806
DpnII GATC 4 cut(s) 28, 365, 401, 804
Eco130I CCWWGG 2 cut(s) 603, 1165
Eco147I AGGCCT 1 cut(s) 382
Eco24I GRGCYC 2 cut(s) 422, 1010
Eco47I GGWCC 1 cut(s) 996
Eco57I CTGAAG 1 cut(s) 707
Eco88I CYCGRG 1 cut(s) 421
Eco91I GGTNACC 1 cut(s) 782
EcoO109I RGGNCCY 1 cut(s) 1178
EcoO65I GGTNACC 1 cut(s) 782
EcoRII CCWGG 4 cut(s) 355, 529, 736, 786
EcoT14I CCWWGG 2 cut(s) 603, 1165
EcoT38I GRGCYC 2 cut(s) 422, 1010
ErhI CCWWGG 2 cut(s) 603, 1165
FaeI CATG 5 cut(s) 64, 73, 280, 725, 1087
FaqI GGGAC 2 cut(s) 183, 438
FatI CATG 5 cut(s) 60, 69, 276, 721, 1083
FblI GTMKAC 1 cut(s) 434
Fnu4HI GCNGC 5 cut(s) 486, 669, 828, 1034, 1037
FokI GGATG 3 cut(s) 38, 274, 1005
FriOI GRGCYC 2 cut(s) 422, 1010
Fsp4HI GCNGC 5 cut(s) 486, 669, 828, 1034, 1037
FspBI CTAG 2 cut(s) 629, 1001
GlaI GCGC 1 cut(s) 880
GluI GCNGC 5 cut(s) 486, 669, 828, 1034, 1037
GsuI CTGGAG 4 cut(s) 339, 449, 561, 759
HaeII RGCGCY 1 cut(s) 882
HaeIII GGCC 5 cut(s) 229, 382, 420, 602, 1180
HapII CCGG 2 cut(s) 422, 458
HhaI GCGC 1 cut(s) 881
Hin1II CATG 5 cut(s) 64, 73, 280, 725, 1087
Hin6I GCGC 1 cut(s) 879
HinP1I GCGC 1 cut(s) 879
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HindIII AAGCTT 2 cut(s) 91, 837
HinfI GANTC 3 cut(s) 46, 632, 960
HpaII CCGG 2 cut(s) 422, 458
HphI GGTGA 2 cut(s) 550, 561
Hpy166II GTNNAC 4 cut(s) 66, 435, 577, 868
Hpy188I TCNGA 4 cut(s) 82, 616, 687, 936
Hpy188III TCNNGA 2 cut(s) 893, 977
Hpy8I GTNNAC 4 cut(s) 66, 435, 577, 868
Hpy99I CGWCG 1 cut(s) 1131
HpyAV CCTTC 4 cut(s) 173, 474, 682, 982
HpyCH4III ACNGT 3 cut(s) 325, 372, 942
HpyCH4IV ACGT 1 cut(s) 1161
HpyCH4V TGCA 5 cut(s) 263, 276, 827, 846, 1087
HpyF10VI GCNNNNNNNGC 2 cut(s) 226, 836
HpyF3I CTNAG 2 cut(s) 245, 1182
HpySE526I ACGT 1 cut(s) 1161
Hsp92II CATG 5 cut(s) 64, 73, 280, 725, 1087
HspAI GCGC 1 cut(s) 879
KpnI GGTACC 1 cut(s) 350
Kzo9I GATC 4 cut(s) 28, 365, 401, 804
LmnI GCTCC 2 cut(s) 796, 923
Lsp1109I GCAGC 5 cut(s) 497, 680, 839, 1045, 1048
LweI GCATC 2 cut(s) 298, 765
MabI ACCWGGT 1 cut(s) 786
MaeI CTAG 2 cut(s) 629, 1001
MaeII ACGT 1 cut(s) 1161
MaeIII GTNAC 6 cut(s) 556, 742, 782, 883, 1045, 1112
MalI GATC 4 cut(s) 30, 367, 403, 806
MboI GATC 4 cut(s) 28, 365, 401, 804
MboII GAAGA 4 cut(s) 215, 265, 319, 1148
MflI RGATCY 1 cut(s) 401
MhlI GDGCHC 2 cut(s) 422, 1010
MluCI AATT 6 cut(s) 157, 299, 466, 493, 562, 1151
MroXI GAANNNNTTC 1 cut(s) 1155
MseI TTAA 4 cut(s) 18, 186, 1094, 1143
MspCI CTTAAG 1 cut(s) 185
MspI CCGG 2 cut(s) 422, 458
MspR9I CCNGG 6 cut(s) 357, 422, 423, 531, 738, 788
Mva1269I GAATGC 1 cut(s) 244
MvaI CCWGG 4 cut(s) 357, 531, 738, 788
MwoI GCNNNNNNNGC 2 cut(s) 226, 836
NciI CCSGG 2 cut(s) 422, 423
NdeII GATC 4 cut(s) 28, 365, 401, 804
NlaIII CATG 5 cut(s) 64, 73, 280, 725, 1087
NlaIV GGNNCC 5 cut(s) 230, 348, 420, 998, 1179
NmuCI GTSAC 3 cut(s) 556, 1045, 1112
NspI RCATGY 3 cut(s) 64, 280, 1087
NspV TTCGAA 1 cut(s) 177
PaeI GCATGC 1 cut(s) 280
PceI AGGCCT 1 cut(s) 382
PciI ACATGT 1 cut(s) 60
PctI GAATGC 1 cut(s) 244
PdmI GAANNNNTTC 1 cut(s) 1155
PfeI GAWTC 3 cut(s) 46, 632, 960
PflMI CCANNNNNTGG 1 cut(s) 146
PfoI TCCNGGA 1 cut(s) 355
PkrI GCNGC 5 cut(s) 487, 670, 829, 1035, 1038
PscI ACATGT 1 cut(s) 60
Psp6I CCWGG 4 cut(s) 355, 529, 736, 786
PspEI GGTNACC 1 cut(s) 782
PspGI CCWGG 4 cut(s) 355, 529, 736, 786
PspN4I GGNNCC 5 cut(s) 230, 348, 420, 998, 1179
PspOMI GGGCCC 1 cut(s) 418
PspPI GGNCC 6 cut(s) 228, 418, 419, 600, 996, 1178
PstNI CAGNNNCTG 2 cut(s) 854, 940
PsuI RGATCY 1 cut(s) 401
RsaI GTAC 2 cut(s) 65, 348
RsaNI GTAC 2 cut(s) 64, 347
SaqAI TTAA 4 cut(s) 18, 186, 1094, 1143
SatI GCNGC 5 cut(s) 486, 669, 828, 1034, 1037
Sau3AI GATC 4 cut(s) 28, 365, 401, 804
Sau96I GGNCC 6 cut(s) 228, 418, 419, 600, 996, 1178
ScrFI CCNGG 6 cut(s) 357, 422, 423, 531, 738, 788
SduI GDGCHC 2 cut(s) 422, 1010
SexAI ACCWGGT 1 cut(s) 786
SfaNI GCATC 2 cut(s) 298, 765
SfcI CTRYAG 1 cut(s) 1054
SfuI TTCGAA 1 cut(s) 177
SinI GGWCC 1 cut(s) 996
SmaI CCCGGG 1 cut(s) 423
SmlI CTYRAG 3 cut(s) 185, 977, 1019
SmoI CTYRAG 3 cut(s) 185, 977, 1019
SphI GCATGC 1 cut(s) 280
Sse9I AATT 6 cut(s) 157, 299, 466, 493, 562, 1151
SseBI AGGCCT 1 cut(s) 382
SspI AATATT 2 cut(s) 153, 447
SspMI CTAG 2 cut(s) 629, 1001
StuI AGGCCT 1 cut(s) 382
StyD4I CCNGG 6 cut(s) 355, 420, 421, 529, 736, 786
StyI CCWWGG 2 cut(s) 603, 1165
TaaI ACNGT 3 cut(s) 325, 372, 942
TaiI ACGT 1 cut(s) 1164
TaqI TCGA 3 cut(s) 54, 177, 1107
TasI AATT 6 cut(s) 157, 299, 466, 493, 562, 1151
TatI WGTACW 1 cut(s) 63
TfiI GAWTC 3 cut(s) 46, 632, 960
Tru1I TTAA 4 cut(s) 18, 186, 1094, 1143
Tru9I TTAA 4 cut(s) 18, 186, 1094, 1143
TscAI CASTG 4 cut(s) 375, 720, 816, 1018
TseFI GTSAC 3 cut(s) 556, 1045, 1112
TseI GCWGC 5 cut(s) 485, 668, 827, 1033, 1036
Tsp45I GTSAC 3 cut(s) 556, 1045, 1112
TspDTI ATGAA 6 cut(s) 86, 266, 670, 849, 960, 1040
TspGWI ACGGA 3 cut(s) 99, 280, 544
TspMI CCCGGG 1 cut(s) 421
TspRI CASTG 4 cut(s) 375, 720, 816, 1018
Van91I CCANNNNNTGG 1 cut(s) 146
Vha464I CTTAAG 1 cut(s) 185
VpaK11BI GGWCC 1 cut(s) 996
XapI RAATTY 1 cut(s) 1151
XceI RCATGY 3 cut(s) 64, 280, 1087
XmaI CCCGGG 1 cut(s) 421
XmiI GTMKAC 1 cut(s) 434
XmnI GAANNNNTTC 1 cut(s) 1155
XspI CTAG 2 cut(s) 629, 1001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.