Rmu_sc0002500.1_g000005

purine permease

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002500.1
Physical Location & Seq
Forward (+)
21781 .. 26137
4357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002500.1_g000005.1.cds

Sequence Viewer

Length: 1152 bp
atgcaaatggaaaccactgaggatgagcaacgtaaagccaccgccctgaaaaggttgctgctcattctgagctgcgtattcttatccataggcaactgcggcggccctttgataatgcgcctctacttcatccacggcggcaagcgcgtctggctttcgagcatgctcgaaaccggtggctgtcccataatcctcgtccctatagccatagcctactaccaccgccgcaaaaaccaagctccaactgaaccaccaaccaagctcttcttcatgaagttccctctcttcgttgcctccgccgtcatcggcgtcctcaccggcctcgacgactacctgtacgcctacggtgtcgcccgcctccccgtctccacctcatccctcatcatagcggctcagctggctttcacggccttgtttgccttcatacttgtgaagcagaagttcacgtcgtattccataaacgccatcgtgttgctgacggtgggggcggcggttctgggcctgaacacgaactcggaccggcccgagggggagtcgaatgcccagtacatgctcgggtttatgatgacagtggccgcggcggcgttgtatgggtttgtgttgccgttggtggagttgatgtacaagaaagccaagcagaacataacgtatgctttggttttggagattcagttggttatgtgtttgtttgctaccattttctgcactgttgggatgctggtcaacaatgatttcaagccctcagccatggcggccggtatcggtctccttctatgtcatctgtggatgacactgagaagtcattcttgtgcggcaactacccatcttagccctagatctctcatcatctcttgctggaaggaaataggtgatgtgagggatatgaatcggtgtttcagtccgatcatatttaatggtgattgggctggaagccaagagtggagaggtcctgtgtggcggacgtgcgacctctggacccgggtcaaagcggccaaattcagattgatggcggcgagggcctttgcacaccaacccgtggatgtggtggagatagttactgtgcaccgtgcagtgaaccagcatctggagcatgaagagcacgccggtcttctgagtccggattggcaagggagtggtaacggcgacgtctag

Protein Analysis

383

Amino Acids

42.4

Weight (kDa)

8.75

Isoelectric Point (pI)

40.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1149
AccB7I CCANNNNNTGG 2 cut(s) 1036, 1084
AccII CGCG 2 cut(s) 147, 578
AccIII TCCGGA 1 cut(s) 1117
AcoI YGGCCR 3 cut(s) 573, 753, 990
AcsI RAATTY 1 cut(s) 995
AcyI GRCGYC 2 cut(s) 309, 1146
AfaI GTAC 3 cut(s) 338, 548, 623
AfiI CCNNNNNNNGG 4 cut(s) 51, 526, 1036, 1084
AgeI ACCGGT 1 cut(s) 173
AgsI TTSAA 1 cut(s) 736
AjiI CACGTC 2 cut(s) 447, 963
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
AluBI AGCT 4 cut(s) 72, 239, 262, 397
AluI AGCT 4 cut(s) 72, 239, 262, 397
Alw21I GWGCWC 2 cut(s) 1065, 1101
Alw26I GTCTC 2 cut(s) 370, 770
Alw44I GTGCAC 1 cut(s) 1061
AlwNI CAGNNNCTG 1 cut(s) 1084
Ama87I CYCGRG 3 cut(s) 524, 554, 978
Aor13HI TCCGGA 1 cut(s) 1117
AoxI GGCC 9 cut(s) 103, 319, 408, 499, 521, 573, 753, 990, 1017
ApaLI GTGCAC 1 cut(s) 1061
ApeKI GCWGC 2 cut(s) 58, 72
ApoI RAATTY 1 cut(s) 995
AsiGI ACCGGT 1 cut(s) 173
Asp700I GAANNNNTTC 1 cut(s) 802
AspLEI GCGC 2 cut(s) 120, 147
AspS9I GGNCC 7 cut(s) 104, 499, 517, 522, 947, 975, 1017
AsuC2I CCSGG 2 cut(s) 979, 980
AsuHPI GGTGA 3 cut(s) 307, 881, 929
AvaI CYCGRG 3 cut(s) 524, 554, 978
AvaII GGWCC 3 cut(s) 517, 947, 975
BaeGI GKGCMC 1 cut(s) 1065
BbsI GAAGAC 1 cut(s) 1100
Bbv12I GWGCWC 2 cut(s) 1065, 1101
BbvCI CCTCAGC 1 cut(s) 742
BbvI GCAGC 2 cut(s) 45, 59
BccI CCATC 3 cut(s) 473, 831, 1000
BceAI ACGGC 4 cut(s) 151, 284, 423, 589
BcnI CCSGG 2 cut(s) 979, 980
BcoDI GTCTC 2 cut(s) 370, 770
BfaI CTAG 2 cut(s) 834, 1150
BfmI CTRYAG 1 cut(s) 201
BglI GCCNNNNNGGC 2 cut(s) 581, 752
BglII AGATCT 1 cut(s) 836
BlpI GCTNAGC 1 cut(s) 393
Bme1390I CCNGG 2 cut(s) 979, 980
Bme18I GGWCC 3 cut(s) 517, 947, 975
BmeT110I CYCGRG 3 cut(s) 524, 554, 978
BmgBI CACGTC 2 cut(s) 447, 963
BmgT120I GGNCC 7 cut(s) 104, 499, 517, 522, 947, 975, 1017
BmiI GGNNCC 1 cut(s) 977
BmrFI CCNGG 2 cut(s) 979, 980
BmrI ACTGGG 1 cut(s) 538
BmsI GCATC 2 cut(s) 705, 1090
BmuI ACTGGG 1 cut(s) 538
BoxI GACNNNNGTC 1 cut(s) 980
BpiI GAAGAC 1 cut(s) 1100
BpmI CTGGAG 1 cut(s) 1106
Bpu10I CCTNAGC 1 cut(s) 742
Bpu1102I GCTNAGC 1 cut(s) 393
BpuMI CCSGG 2 cut(s) 979, 980
BsaBI GATNNNNATC 1 cut(s) 885
BsaHI GRCGYC 2 cut(s) 309, 1146
BsaI GGTCTC 1 cut(s) 770
BsaJI CCNNGG 6 cut(s) 133, 525, 576, 747, 978, 1035
BsaWI WCCGGW 2 cut(s) 173, 1117
BsaXI ACNNNNNCTCC 4 cut(s) 605, 635, 656, 686
Bsc4I CCNNNNNNNGG 4 cut(s) 51, 526, 1036, 1084
Bse118I RCCGGY 5 cut(s) 173, 317, 519, 755, 1103
Bse1I ACTGG 1 cut(s) 544
Bse8I GATNNNNATC 1 cut(s) 885
BseAI TCCGGA 1 cut(s) 1117
BseDI CCNNGG 6 cut(s) 133, 525, 576, 747, 978, 1035
BseGI GGATG 6 cut(s) 28, 129, 374, 720, 792, 1045
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 4 cut(s) 51, 526, 1036, 1084
BseMII CTCAG 6 cut(s) 9, 59, 407, 756, 785, 1103
BseNI ACTGG 1 cut(s) 544
BseSI GKGCMC 1 cut(s) 1065
BseX3I CGGCCG 1 cut(s) 753
BseXI GCAGC 2 cut(s) 45, 59
BsgI GTGCAG 2 cut(s) 688, 1089
Bsh1236I CGCG 2 cut(s) 147, 578
Bsh1285I CGRYCG 1 cut(s) 756
BshFI GGCC 9 cut(s) 105, 321, 410, 501, 523, 575, 755, 992, 1019
BshTI ACCGGT 1 cut(s) 173
BsiEI CGRYCG 1 cut(s) 756
BsiHKAI GWGCWC 2 cut(s) 1065, 1101
BsiHKCI CYCGRG 3 cut(s) 524, 554, 978
BsiSI CCGG 7 cut(s) 174, 318, 520, 756, 979, 1104, 1118
BslFI GGGAC 2 cut(s) 168, 182
BslI CCNNNNNNNGG 4 cut(s) 51, 526, 1036, 1084
BsmAI GTCTC 2 cut(s) 370, 770
BsmBI CGTCTC 1 cut(s) 370
BsmFI GGGAC 2 cut(s) 168, 182
BsmI GAATGC 1 cut(s) 544
BsnI GGCC 9 cut(s) 105, 321, 410, 501, 523, 575, 755, 992, 1019
Bso31I GGTCTC 1 cut(s) 770
BsoBI CYCGRG 3 cut(s) 524, 554, 978
Bsp1286I GDGCHC 2 cut(s) 1065, 1101
Bsp13I TCCGGA 1 cut(s) 1117
Bsp1407I TGTACA 1 cut(s) 621
Bsp143I GATC 2 cut(s) 836, 903
Bsp1720I GCTNAGC 1 cut(s) 393
Bsp19I CCATGG 1 cut(s) 747
BspANI GGCC 9 cut(s) 105, 321, 410, 501, 523, 575, 755, 992, 1019
BspCNI CTCAG 6 cut(s) 10, 60, 406, 755, 786, 1104
BspEI TCCGGA 1 cut(s) 1117
BspFNI CGCG 2 cut(s) 147, 578
BspHI TCATGA 1 cut(s) 270
BspLI GGNNCC 1 cut(s) 977
BspQI GCTCTTC 2 cut(s) 269, 1089
BspTNI GGTCTC 1 cut(s) 770
BsrFI RCCGGY 5 cut(s) 173, 317, 519, 755, 1103
BsrGI TGTACA 1 cut(s) 621
BsrI ACTGG 1 cut(s) 544
BssAI RCCGGY 5 cut(s) 173, 317, 519, 755, 1103
BssECI CCNNGG 6 cut(s) 133, 525, 576, 747, 978, 1035
BssMI GATC 2 cut(s) 836, 903
BssNI GRCGYC 2 cut(s) 309, 1146
BssT1I CCWWGG 1 cut(s) 747
Bst4CI ACNGT 6 cut(s) 347, 481, 571, 709, 1060, 1067
Bst6I CTCTTC 3 cut(s) 269, 290, 1089
BstACI GRCGYC 2 cut(s) 309, 1146
BstAUI TGTACA 1 cut(s) 621
BstC8I GCNNGC 5 cut(s) 143, 164, 355, 399, 1101
BstDEI CTNAG 7 cut(s) 18, 68, 393, 742, 794, 827, 1112
BstDSI CCRYGG 4 cut(s) 133, 576, 747, 1035
BstF5I GGATG 6 cut(s) 28, 129, 374, 720, 792, 1045
BstFNI CGCG 2 cut(s) 147, 578
BstHHI GCGC 2 cut(s) 120, 147
BstKTI GATC 2 cut(s) 839, 906
BstMAI GTCTC 2 cut(s) 370, 770
BstMBI GATC 2 cut(s) 836, 903
BstMCI CGRYCG 1 cut(s) 756
BstNSI RCATGY 2 cut(s) 166, 553
BstPAI GACNNNNGTC 1 cut(s) 980
BstSCI CCNGG 2 cut(s) 977, 978
BstSFI CTRYAG 1 cut(s) 201
BstSLI GKGCMC 1 cut(s) 1065
BstUI CGCG 2 cut(s) 147, 578
BstV1I GCAGC 2 cut(s) 45, 59
BstV2I GAAGAC 1 cut(s) 1100
BstX2I RGATCY 1 cut(s) 836
BstYI RGATCY 1 cut(s) 836
BstZI CGGCCG 1 cut(s) 753
BsuRI GGCC 9 cut(s) 105, 321, 410, 501, 523, 575, 755, 992, 1019
BtgI CCRYGG 4 cut(s) 133, 576, 747, 1035
BtrI CACGTC 2 cut(s) 447, 963
BtsCI GGATG 6 cut(s) 28, 129, 374, 720, 792, 1045
BtsI GCAGTG 1 cut(s) 1077
BtsIMutI CAGTG 5 cut(s) 15, 576, 705, 791, 1077
Cac8I GCNNGC 5 cut(s) 143, 164, 355, 399, 1101
CaiI CAGNNNCTG 1 cut(s) 1084
CciI TCATGA 1 cut(s) 270
CfoI GCGC 2 cut(s) 120, 147
Cfr10I RCCGGY 5 cut(s) 173, 317, 519, 755, 1103
Cfr13I GGNCC 7 cut(s) 104, 499, 517, 522, 947, 975, 1017
Cfr42I CCGCGG 1 cut(s) 579
Cfr9I CCCGGG 1 cut(s) 978
CpoI CGGWCCG 1 cut(s) 517
CseI GACGC 2 cut(s) 136, 298
Csp6I GTAC 3 cut(s) 337, 547, 622
CspAI ACCGGT 1 cut(s) 173
CspI CGGWCCG 1 cut(s) 517
CviAII CATG 5 cut(s) 163, 271, 550, 748, 1091
CviQI GTAC 3 cut(s) 337, 547, 622
DdeI CTNAG 7 cut(s) 18, 68, 393, 742, 794, 827, 1112
DpnI GATC 2 cut(s) 838, 905
DpnII GATC 2 cut(s) 836, 903
EaeI YGGCCR 3 cut(s) 573, 753, 990
EagI CGGCCG 1 cut(s) 753
Eam1104I CTCTTC 3 cut(s) 269, 290, 1089
EarI CTCTTC 3 cut(s) 269, 290, 1089
EciI GGCGGA 2 cut(s) 286, 973
EclXI CGGCCG 1 cut(s) 753
Eco130I CCWWGG 1 cut(s) 747
Eco31I GGTCTC 1 cut(s) 770
Eco47I GGWCC 3 cut(s) 517, 947, 975
Eco52I CGGCCG 1 cut(s) 753
Eco88I CYCGRG 3 cut(s) 524, 554, 978
EcoO109I RGGNCCY 2 cut(s) 947, 1017
EcoT14I CCWWGG 1 cut(s) 747
ErhI CCWWGG 1 cut(s) 747
Esp3I CGTCTC 1 cut(s) 370
FaeI CATG 5 cut(s) 166, 274, 553, 751, 1094
FalI AAGNNNNNCTT 4 cut(s) 251, 283, 790, 822
FaqI GGGAC 2 cut(s) 168, 182
FatI CATG 5 cut(s) 162, 270, 549, 747, 1090
FauI CCCGC 1 cut(s) 362
FokI GGATG 6 cut(s) 35, 116, 361, 727, 799, 1052
FspBI CTAG 2 cut(s) 834, 1150
GlaI GCGC 2 cut(s) 119, 146
GsuI CTGGAG 1 cut(s) 1106
HaeIII GGCC 9 cut(s) 105, 321, 410, 501, 523, 575, 755, 992, 1019
HapII CCGG 7 cut(s) 174, 318, 520, 756, 979, 1104, 1118
HgaI GACGC 2 cut(s) 136, 298
HhaI GCGC 2 cut(s) 120, 147
Hin1I GRCGYC 2 cut(s) 309, 1146
Hin1II CATG 5 cut(s) 166, 274, 553, 751, 1094
Hin6I GCGC 2 cut(s) 118, 145
HinP1I GCGC 2 cut(s) 118, 145
HincII GTYRAC 1 cut(s) 724
HindII GTYRAC 1 cut(s) 724
HinfI GANTC 4 cut(s) 533, 667, 886, 1114
HpaII CCGG 7 cut(s) 174, 318, 520, 756, 979, 1104, 1118
HphI GGTGA 3 cut(s) 307, 881, 929
Hpy166II GTNNAC 4 cut(s) 444, 724, 1063, 1075
Hpy188I TCNGA 5 cut(s) 69, 517, 903, 1001, 1113
Hpy188III TCNNGA 4 cut(s) 271, 973, 1085, 1118
Hpy8I GTNNAC 4 cut(s) 444, 724, 1063, 1075
Hpy99I CGWCG 3 cut(s) 329, 451, 1148
HpyAV CCTTC 3 cut(s) 430, 779, 853
HpyCH4III ACNGT 6 cut(s) 347, 481, 571, 709, 1060, 1067
HpyCH4IV ACGT 5 cut(s) 31, 446, 647, 962, 1146
HpyCH4V TGCA 5 cut(s) 4, 705, 1025, 1063, 1070
HpyF3I CTNAG 7 cut(s) 18, 68, 393, 742, 794, 827, 1112
HpySE526I ACGT 5 cut(s) 31, 446, 647, 962, 1146
Hsp92I GRCGYC 2 cut(s) 309, 1146
Hsp92II CATG 5 cut(s) 166, 274, 553, 751, 1094
HspAI GCGC 2 cut(s) 118, 145
Kpn2I TCCGGA 1 cut(s) 1117
KspI CCGCGG 1 cut(s) 579
Kzo9I GATC 2 cut(s) 836, 903
LguI GCTCTTC 2 cut(s) 269, 1089
LmnI GCTCC 2 cut(s) 244, 1087
Lsp1109I GCAGC 2 cut(s) 45, 59
LweI GCATC 2 cut(s) 705, 1090
MaeI CTAG 2 cut(s) 834, 1150
MaeII ACGT 5 cut(s) 31, 446, 647, 962, 1146
MaeIII GTNAC 2 cut(s) 1054, 1136
MalI GATC 2 cut(s) 838, 905
MboI GATC 2 cut(s) 836, 903
MboII GAAGA 5 cut(s) 256, 259, 277, 1100, 1106
MflI RGATCY 1 cut(s) 836
MhlI GDGCHC 2 cut(s) 1065, 1101
MluCI AATT 1 cut(s) 995
MlyI GAGTC 2 cut(s) 542, 1123
MmeI TCCRAC 1 cut(s) 266
MroI TCCGGA 1 cut(s) 1117
MroXI GAANNNNTTC 1 cut(s) 802
MseI TTAA 1 cut(s) 912
MslI CAYNNNNRTG 2 cut(s) 428, 807
MspA1I CMGCKG 2 cut(s) 397, 578
MspI CCGG 7 cut(s) 174, 318, 520, 756, 979, 1104, 1118
MspR9I CCNGG 2 cut(s) 979, 980
Mva1269I GAATGC 1 cut(s) 544
MvnI CGCG 2 cut(s) 147, 578
NciI CCSGG 2 cut(s) 979, 980
NcoI CCATGG 1 cut(s) 747
NdeII GATC 2 cut(s) 836, 903
NlaIII CATG 5 cut(s) 166, 274, 553, 751, 1094
NlaIV GGNNCC 1 cut(s) 977
NspI RCATGY 2 cut(s) 166, 553
PaeI GCATGC 1 cut(s) 166
PagI TCATGA 1 cut(s) 270
PciSI GCTCTTC 2 cut(s) 269, 1089
PctI GAATGC 1 cut(s) 544
PdmI GAANNNNTTC 1 cut(s) 802
PfeI GAWTC 2 cut(s) 667, 886
PflMI CCANNNNNTGG 2 cut(s) 1036, 1084
PinAI ACCGGT 1 cut(s) 173
PleI GAGTC 2 cut(s) 541, 1122
PpsI GAGTC 2 cut(s) 541, 1122
PpuMI RGGWCCY 1 cut(s) 947
PshAI GACNNNNGTC 1 cut(s) 980
Psp5II RGGWCCY 1 cut(s) 947
PspN4I GGNNCC 1 cut(s) 977
PspPI GGNCC 7 cut(s) 104, 499, 517, 522, 947, 975, 1017
PspPPI RGGWCCY 1 cut(s) 947
PstNI CAGNNNCTG 1 cut(s) 1084
PsuI RGATCY 1 cut(s) 836
PvuII CAGCTG 1 cut(s) 397
RsaI GTAC 3 cut(s) 338, 548, 623
RsaNI GTAC 3 cut(s) 337, 547, 622
RseI CAYNNNNRTG 2 cut(s) 428, 807
Rsr2I CGGWCCG 1 cut(s) 517
RsrII CGGWCCG 1 cut(s) 517
SacII CCGCGG 1 cut(s) 579
SapI GCTCTTC 2 cut(s) 269, 1089
SaqAI TTAA 1 cut(s) 912
Sau3AI GATC 2 cut(s) 836, 903
Sau96I GGNCC 7 cut(s) 104, 499, 517, 522, 947, 975, 1017
SchI GAGTC 2 cut(s) 542, 1123
ScrFI CCNGG 2 cut(s) 979, 980
SduI GDGCHC 2 cut(s) 1065, 1101
SfaNI GCATC 2 cut(s) 705, 1090
SfcI CTRYAG 1 cut(s) 201
Sfr303I CCGCGG 1 cut(s) 579
SgrBI CCGCGG 1 cut(s) 579
SinI GGWCC 3 cut(s) 517, 947, 975
SmaI CCCGGG 1 cut(s) 980
SmiMI CAYNNNNRTG 2 cut(s) 428, 807
SphI GCATGC 1 cut(s) 166
Sse9I AATT 1 cut(s) 995
SspMI CTAG 2 cut(s) 834, 1150
StyD4I CCNGG 2 cut(s) 977, 978
StyI CCWWGG 1 cut(s) 747
TaaI ACNGT 6 cut(s) 347, 481, 571, 709, 1060, 1067
TaiI ACGT 5 cut(s) 34, 449, 650, 965, 1149
TaqI TCGA 4 cut(s) 158, 168, 324, 536
TaqII GACCGA 1 cut(s) 752
TasI AATT 1 cut(s) 995
TatI WGTACW 2 cut(s) 546, 621
TfiI GAWTC 2 cut(s) 667, 886
Tru1I TTAA 1 cut(s) 912
Tru9I TTAA 1 cut(s) 912
TscAI CASTG 5 cut(s) 22, 576, 712, 798, 1077
TseI GCWGC 2 cut(s) 58, 72
TspDTI ATGAA 6 cut(s) 118, 259, 287, 412, 899, 1107
TspMI CCCGGG 1 cut(s) 978
TspRI CASTG 5 cut(s) 22, 576, 712, 798, 1077
Van91I CCANNNNNTGG 2 cut(s) 1036, 1084
VneI GTGCAC 1 cut(s) 1061
VpaK11BI GGWCC 3 cut(s) 517, 947, 975
XapI RAATTY 1 cut(s) 995
XceI RCATGY 2 cut(s) 166, 553
XmaI CCCGGG 1 cut(s) 978
XmnI GAANNNNTTC 1 cut(s) 802
XspI CTAG 2 cut(s) 834, 1150
ZraI GACGTC 1 cut(s) 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.