Rmu_sc0016377.1_g000001

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016377.1
Physical Location & Seq
Reverse (-)
1 .. 4231
4231 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016377.1_g000001.1.cds

Sequence Viewer

Length: 1491 bp
atggcgttttggtggcctctggtcgtcctcgctttcgcttacgccatttgtaggttccttttgatgctcatccctcccaatgtgccttccattcaagtcgatgcttctgacgtgttggacgatgggaatcagacgcaggagaacagtttcatatatgtacctccgaggggaaggacacagcagtcggagacaaaggttcagtgctatgaacctgcaaccatgaaatacctgggatatcaccctgcattgactcctgttgaggtcaaggagcgggtagcactagcaaggaaggcacagaagacatgggcaaagagtagcttcaagcaaagacgcctgtttcttcggattcttctcaagtatataatagaacaccaagaccttatatgtgaaatatcttcacgtgatacggggaagacaatggtagatgcgtctttaggggagataatgacaacgtgtgagaagatcacttggcttctttcagagggtgagcggtggctaaagcctgaataccgatcttgtggaagatcaatgattcacaagagatctaaagttgaattccaccctcttggagttattggtgccattgtgtcatggaattatccttttcacaatatctttaatccaatgctggcagcagttttttctggaaatggcattgtgattaaggtttcagaacatgcaagctggtctggatgcttctacttccgcataatacaatctgcccttgctgctgtaggagctcctgaaaatctagttgatgtcataacagggttttctgaaactggggaagcacttgtgtcttctgttgacaagttaatatttgttggatcaccgggtgtgggtaagatgataatgagaaatgctgctgagacgcttacaccagttacacttgaacttggtggaaaagatgcatttattgtatgtgaagatgctgatgtggaacatgtcgcccaaattgctgtgagagccgttcttcagtcaagtggacagaactgtgctggggctgagagattttatgttcacaaggacatttactcttcattcatcaatcaagtatctaagattgtgaaatctgtttcagctggcccaccgcttgctggaaagtatgatatgggtgctatatgtatgcaagaacactctgaaaggcttcaaaaccttgttaatgatgccttagacaaaggcgcaaaacttgttgttcggggaagttttggccatataggtgaagatgcagttgatcacttttttccacctactgtgattgaaaatgtaaatcacacgatgaagttgatgcaagatgaggcttttggaccaatcatgcccataatgaagtttagcactgatgaagaggctgtgaaactagccaatgactcaaaatacggtcttggttgtgctgttttttctggcagccagcgtcgtgctagagagataacttcccagatacactgtggagttgctgcaattaatgattttgcatcatcatacatgtgccag

Protein Analysis

497

Amino Acids

54.98

Weight (kDa)

6.51

Isoelectric Point (pI)

37.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 181
Acc36I ACCTGC 1 cut(s) 220
AccB1I GGYRCC 1 cut(s) 578
AccBSI CCGCTC 2 cut(s) 271, 490
AciI CCGC 4 cut(s) 271, 490, 706, 1091
AclWI GGATC 1 cut(s) 835
AcoI YGGCCR 1 cut(s) 1210
AcsI RAATTY 1 cut(s) 554
AcuI CTGAAG 1 cut(s) 959
AcvI CACGTG 1 cut(s) 401
AcyI GRCGYC 1 cut(s) 331
AdeI CACNNNGTG 1 cut(s) 836
AfaI GTAC 1 cut(s) 159
AfiI CCNNNNNNNGG 4 cut(s) 51, 167, 839, 1097
AflIII ACRYGT 4 cut(s) 111, 452, 943, 1482
AgsI TTSAA 6 cut(s) 95, 322, 554, 893, 1151, 1262
AjiI CACGTC 1 cut(s) 112
AjnI CCWGG 1 cut(s) 228
AluBI AGCT 4 cut(s) 318, 684, 740, 1082
AluI AGCT 4 cut(s) 318, 684, 740, 1082
Alw21I GWGCWC 1 cut(s) 742
Alw26I GTCTC 2 cut(s) 182, 863
AlwI GGATC 1 cut(s) 835
AoxI GGCC 3 cut(s) 14, 1084, 1210
ApeKI GCWGC 5 cut(s) 632, 728, 863, 1404, 1454
ApoI RAATTY 1 cut(s) 554
AseI ATTAAT 1 cut(s) 1461
Asp700I GAANNNNTTC 2 cut(s) 146, 1146
AspLEI GCGC 1 cut(s) 1184
AspS9I GGNCC 2 cut(s) 1085, 1307
AsuC2I CCSGG 1 cut(s) 834
AsuHPI GGTGA 4 cut(s) 230, 497, 822, 1232
AvaII GGWCC 1 cut(s) 1307
BalI TGGCCA 1 cut(s) 1212
BanI GGYRCC 1 cut(s) 578
BanII GRGCYC 1 cut(s) 742
BbrPI CACGTG 1 cut(s) 401
BbsI GAAGAC 3 cut(s) 305, 419, 792
Bbv12I GWGCWC 1 cut(s) 742
BbvI GCAGC 5 cut(s) 644, 715, 850, 1416, 1441
BccI CCATC 1 cut(s) 116
BceAI ACGGC 1 cut(s) 953
BciT130I CCWGG 1 cut(s) 230
BclI TGATCA 1 cut(s) 1234
BcnI CCSGG 1 cut(s) 834
BcoDI GTCTC 2 cut(s) 182, 863
BfaI CTAG 4 cut(s) 281, 752, 1358, 1419
BfmI CTRYAG 1 cut(s) 732
BfuAI ACCTGC 1 cut(s) 220
BglII AGATCT 1 cut(s) 542
BisI GCNGC 5 cut(s) 633, 729, 864, 1405, 1455
BlsI GCNGC 5 cut(s) 634, 730, 865, 1406, 1456
Bme1390I CCNGG 2 cut(s) 230, 834
Bme18I GGWCC 1 cut(s) 1307
BmgBI CACGTC 1 cut(s) 112
BmgT120I GGNCC 2 cut(s) 1085, 1307
BmiI GGNNCC 2 cut(s) 56, 580
BmrFI CCNGG 2 cut(s) 230, 834
BmrI ACTGGG 1 cut(s) 792
BmuI ACTGGG 1 cut(s) 792
BpiI GAAGAC 3 cut(s) 305, 419, 792
BpuEI CTTGAG 1 cut(s) 338
BpuMI CCSGG 1 cut(s) 834
BsaAI YACGTR 1 cut(s) 401
BsaBI GATNNNNATC 2 cut(s) 68, 126
BsaHI GRCGYC 1 cut(s) 331
BsaJI CCNNGG 2 cut(s) 164, 229
Bsc4I CCNNNNNNNGG 4 cut(s) 51, 167, 839, 1097
Bse1I ACTGG 2 cut(s) 787, 881
Bse8I GATNNNNATC 2 cut(s) 68, 126
BseBI CCWGG 1 cut(s) 230
BseDI CCNNGG 2 cut(s) 164, 229
BseGI GGATG 2 cut(s) 69, 698
BseJI GATNNNNATC 2 cut(s) 68, 126
BseLI CCNNNNNNNGG 4 cut(s) 51, 167, 839, 1097
BseMII CTCAG 2 cut(s) 858, 996
BseNI ACTGG 2 cut(s) 787, 881
BseXI GCAGC 5 cut(s) 644, 715, 850, 1416, 1441
BseYI CCCAGC 1 cut(s) 998
BshFI GGCC 3 cut(s) 16, 1086, 1212
BshNI GGYRCC 1 cut(s) 578
BsiHKAI GWGCWC 1 cut(s) 742
BsiSI CCGG 1 cut(s) 833
BslI CCNNNNNNNGG 4 cut(s) 51, 167, 839, 1097
BsmAI GTCTC 2 cut(s) 182, 863
BsmBI CGTCTC 1 cut(s) 863
BsnI GGCC 3 cut(s) 16, 1086, 1212
Bsp1286I GDGCHC 1 cut(s) 742
Bsp143I GATC 6 cut(s) 462, 512, 524, 542, 827, 1234
BspACI CCGC 4 cut(s) 271, 490, 706, 1091
BspANI GGCC 3 cut(s) 16, 1086, 1212
BspCNI CTCAG 2 cut(s) 859, 997
BspLI GGNNCC 2 cut(s) 56, 580
BspMI ACCTGC 1 cut(s) 220
BspPI GGATC 1 cut(s) 835
BspT107I GGYRCC 1 cut(s) 578
BsrBI CCGCTC 2 cut(s) 271, 490
BsrI ACTGG 2 cut(s) 787, 881
BssECI CCNNGG 2 cut(s) 164, 229
BssMI GATC 6 cut(s) 462, 512, 524, 542, 827, 1234
BssNI GRCGYC 1 cut(s) 331
Bst2UI CCWGG 1 cut(s) 230
Bst4CI ACNGT 5 cut(s) 146, 995, 1255, 1379, 1445
Bst6I CTCTTC 2 cut(s) 1042, 1338
BstACI GRCGYC 1 cut(s) 331
BstBAI YACGTR 1 cut(s) 401
BstC8I GCNNGC 5 cut(s) 630, 682, 1084, 1095, 1409
BstDEI CTNAG 4 cut(s) 867, 1005, 1059, 1171
BstF5I GGATG 2 cut(s) 69, 698
BstHHI GCGC 1 cut(s) 1184
BstKTI GATC 6 cut(s) 465, 515, 527, 545, 830, 1237
BstMAI GTCTC 2 cut(s) 182, 863
BstMBI GATC 6 cut(s) 462, 512, 524, 542, 827, 1234
BstMWI GCNNNNNNNGC 5 cut(s) 290, 728, 737, 956, 965
BstNI CCWGG 1 cut(s) 230
BstNSI RCATGY 3 cut(s) 680, 947, 1486
BstSCI CCNGG 2 cut(s) 228, 832
BstSFI CTRYAG 1 cut(s) 732
BstV1I GCAGC 5 cut(s) 644, 715, 850, 1416, 1441
BstV2I GAAGAC 3 cut(s) 305, 419, 792
BstX2I RGATCY 1 cut(s) 542
BstXI CCANNNNNNTGG 1 cut(s) 566
BstYI RGATCY 1 cut(s) 542
BsuRI GGCC 3 cut(s) 16, 1086, 1212
BtrI CACGTC 1 cut(s) 112
BtsCI GGATG 2 cut(s) 69, 698
BtsIMutI CAGTG 3 cut(s) 206, 1335, 1441
BveI ACCTGC 1 cut(s) 220
Cac8I GCNNGC 5 cut(s) 630, 682, 1084, 1095, 1409
CfoI GCGC 1 cut(s) 1184
Cfr13I GGNCC 2 cut(s) 1085, 1307
CseI GACGC 5 cut(s) 142, 339, 417, 880, 1400
Csp6I GTAC 1 cut(s) 158
CviAII CATG 7 cut(s) 220, 303, 591, 677, 944, 1315, 1483
CviQI GTAC 1 cut(s) 158
DdeI CTNAG 4 cut(s) 867, 1005, 1059, 1171
DpnI GATC 6 cut(s) 464, 514, 526, 544, 829, 1236
DpnII GATC 6 cut(s) 462, 512, 524, 542, 827, 1234
DraIII CACNNNGTG 1 cut(s) 836
DrdI GACNNNNNNGTC 1 cut(s) 181
DseDI GACNNNNNNGTC 1 cut(s) 181
EaeI YGGCCR 1 cut(s) 1210
Eam1104I CTCTTC 2 cut(s) 1042, 1338
EarI CTCTTC 2 cut(s) 1042, 1338
Ecl136II GAGCTC 1 cut(s) 740
Eco24I GRGCYC 1 cut(s) 742
Eco32I GATATC 1 cut(s) 236
Eco47I GGWCC 1 cut(s) 1307
Eco53kI GAGCTC 1 cut(s) 740
Eco57I CTGAAG 1 cut(s) 959
Eco72I CACGTG 1 cut(s) 401
EcoICRI GAGCTC 1 cut(s) 740
EcoRI GAATTC 1 cut(s) 554
EcoRII CCWGG 1 cut(s) 228
EcoRV GATATC 1 cut(s) 236
EcoT22I ATGCAT 1 cut(s) 913
EcoT38I GRGCYC 1 cut(s) 742
Esp3I CGTCTC 1 cut(s) 863
FaeI CATG 7 cut(s) 223, 306, 594, 680, 947, 1318, 1486
FalI AAGNNNNNCTT 2 cut(s) 302, 334
FatI CATG 7 cut(s) 219, 302, 590, 676, 943, 1314, 1482
FauI CCCGC 1 cut(s) 264
FbaI TGATCA 1 cut(s) 1234
Fnu4HI GCNGC 5 cut(s) 633, 729, 864, 1405, 1455
FokI GGATG 2 cut(s) 56, 705
FriOI GRGCYC 1 cut(s) 742
Fsp4HI GCNGC 5 cut(s) 633, 729, 864, 1405, 1455
FspBI CTAG 4 cut(s) 281, 752, 1358, 1419
GlaI GCGC 1 cut(s) 1183
GluI GCNGC 5 cut(s) 633, 729, 864, 1405, 1455
GsaI CCCAGC 1 cut(s) 1002
HaeIII GGCC 3 cut(s) 16, 1086, 1212
HapII CCGG 1 cut(s) 833
HgaI GACGC 5 cut(s) 142, 339, 417, 880, 1400
HhaI GCGC 1 cut(s) 1184
Hin1I GRCGYC 1 cut(s) 331
Hin1II CATG 7 cut(s) 223, 306, 594, 680, 947, 1318, 1486
Hin6I GCGC 1 cut(s) 1182
HinP1I GCGC 1 cut(s) 1182
HincII GTYRAC 1 cut(s) 808
HindII GTYRAC 1 cut(s) 808
HinfI GANTC 5 cut(s) 127, 250, 346, 532, 1367
HpaII CCGG 1 cut(s) 833
HphI GGTGA 4 cut(s) 230, 497, 822, 1232
Hpy166II GTNNAC 3 cut(s) 808, 986, 1021
Hpy188I TCNGA 9 cut(s) 109, 132, 165, 187, 345, 481, 673, 778, 1141
Hpy188III TCNNGA 3 cut(s) 645, 690, 743
Hpy8I GTNNAC 3 cut(s) 808, 986, 1021
Hpy99I CGWCG 1 cut(s) 1416
HpyAV CCTTC 3 cut(s) 96, 165, 283
HpyCH4III ACNGT 5 cut(s) 146, 995, 1255, 1379, 1445
HpyCH4IV ACGT 3 cut(s) 111, 400, 452
HpyCH4V TGCA 9 cut(s) 215, 245, 680, 911, 1129, 1229, 1291, 1457, 1472
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 728, 737, 956, 965
HpyF3I CTNAG 4 cut(s) 867, 1005, 1059, 1171
HpySE526I ACGT 3 cut(s) 111, 400, 452
Hsp92I GRCGYC 1 cut(s) 331
Hsp92II CATG 7 cut(s) 223, 306, 594, 680, 947, 1318, 1486
HspAI GCGC 1 cut(s) 1182
Ksp22I TGATCA 1 cut(s) 1234
Kzo9I GATC 6 cut(s) 462, 512, 524, 542, 827, 1234
LmnI GCTCC 3 cut(s) 268, 737, 745
Lsp1109I GCAGC 5 cut(s) 644, 715, 850, 1416, 1441
MaeI CTAG 4 cut(s) 281, 752, 1358, 1419
MaeII ACGT 3 cut(s) 111, 400, 452
MaeIII GTNAC 1 cut(s) 883
MalI GATC 6 cut(s) 464, 514, 526, 544, 829, 1236
MbiI CCGCTC 2 cut(s) 271, 490
MboI GATC 6 cut(s) 462, 512, 524, 542, 827, 1234
MflI RGATCY 1 cut(s) 542
MhlI GDGCHC 1 cut(s) 742
MlsI TGGCCA 1 cut(s) 1212
MluCI AATT 4 cut(s) 554, 595, 954, 1458
MluNI TGGCCA 1 cut(s) 1212
MlyI GAGTC 2 cut(s) 244, 1361
MmeI TCCRAC 3 cut(s) 96, 165, 805
Mox20I TGGCCA 1 cut(s) 1212
Mph1103I ATGCAT 1 cut(s) 913
MroXI GAANNNNTTC 2 cut(s) 146, 1146
MscI TGGCCA 1 cut(s) 1212
MseI TTAA 5 cut(s) 618, 663, 815, 1161, 1461
MslI CAYNNNNRTG 2 cut(s) 1218, 1483
Msp20I TGGCCA 1 cut(s) 1212
MspA1I CMGCKG 1 cut(s) 1082
MspI CCGG 1 cut(s) 833
MspR9I CCNGG 2 cut(s) 230, 834
MvaI CCWGG 1 cut(s) 230
MwoI GCNNNNNNNGC 5 cut(s) 290, 728, 737, 956, 965
NciI CCSGG 1 cut(s) 834
NdeII GATC 6 cut(s) 462, 512, 524, 542, 827, 1234
NlaIII CATG 7 cut(s) 223, 306, 594, 680, 947, 1318, 1486
NlaIV GGNNCC 2 cut(s) 56, 580
NsiI ATGCAT 1 cut(s) 913
NspI RCATGY 3 cut(s) 680, 947, 1486
PciI ACATGT 2 cut(s) 943, 1482
PcsI WCGNNNNNNNCGW 1 cut(s) 117
PdmI GAANNNNTTC 2 cut(s) 146, 1146
PfeI GAWTC 3 cut(s) 127, 346, 532
PkrI GCNGC 5 cut(s) 634, 730, 865, 1406, 1456
PleI GAGTC 2 cut(s) 244, 1361
PmaCI CACGTG 1 cut(s) 401
PmlI CACGTG 1 cut(s) 401
PpsI GAGTC 2 cut(s) 244, 1361
Ppu21I YACGTR 1 cut(s) 401
PscI ACATGT 2 cut(s) 943, 1482
PshBI ATTAAT 1 cut(s) 1461
Psp124BI GAGCTC 1 cut(s) 742
Psp6I CCWGG 1 cut(s) 228
PspCI CACGTG 1 cut(s) 401
PspFI CCCAGC 1 cut(s) 998
PspGI CCWGG 1 cut(s) 228
PspN4I GGNNCC 2 cut(s) 56, 580
PspPI GGNCC 2 cut(s) 1085, 1307
PsuI RGATCY 1 cut(s) 542
PvuII CAGCTG 1 cut(s) 1082
RsaI GTAC 1 cut(s) 159
RsaNI GTAC 1 cut(s) 158
RseI CAYNNNNRTG 2 cut(s) 1218, 1483
SacI GAGCTC 1 cut(s) 742
SaqAI TTAA 5 cut(s) 618, 663, 815, 1161, 1461
SatI GCNGC 5 cut(s) 633, 729, 864, 1405, 1455
Sau3AI GATC 6 cut(s) 462, 512, 524, 542, 827, 1234
Sau96I GGNCC 2 cut(s) 1085, 1307
SchI GAGTC 2 cut(s) 244, 1361
ScrFI CCNGG 2 cut(s) 230, 834
SduI GDGCHC 1 cut(s) 742
SfcI CTRYAG 1 cut(s) 732
SinI GGWCC 1 cut(s) 1307
SmiMI CAYNNNNRTG 2 cut(s) 1218, 1483
SmlI CTYRAG 1 cut(s) 353
SmoI CTYRAG 1 cut(s) 353
Sse9I AATT 4 cut(s) 554, 595, 954, 1458
SsiI CCGC 4 cut(s) 271, 490, 706, 1091
SspI AATATT 1 cut(s) 819
SspMI CTAG 4 cut(s) 281, 752, 1358, 1419
SstI GAGCTC 1 cut(s) 742
StyD4I CCNGG 2 cut(s) 228, 832
TaaI ACNGT 5 cut(s) 146, 995, 1255, 1379, 1445
TaiI ACGT 3 cut(s) 114, 403, 455
TaqI TCGA 1 cut(s) 99
TasI AATT 4 cut(s) 554, 595, 954, 1458
TfiI GAWTC 3 cut(s) 127, 346, 532
Tru1I TTAA 5 cut(s) 618, 663, 815, 1161, 1461
Tru9I TTAA 5 cut(s) 618, 663, 815, 1161, 1461
TscAI CASTG 3 cut(s) 206, 1342, 1448
TseI GCWGC 5 cut(s) 632, 728, 863, 1404, 1454
TspDTI ATGAA 8 cut(s) 139, 222, 236, 1029, 1033, 1295, 1340, 1356
TspRI CASTG 3 cut(s) 206, 1342, 1448
VpaK11BI GGWCC 1 cut(s) 1307
VspI ATTAAT 1 cut(s) 1461
XapI RAATTY 1 cut(s) 554
XceI RCATGY 3 cut(s) 680, 947, 1486
XcmI CCANNNNNNNNNTGG 2 cut(s) 226, 1442
XmnI GAANNNNTTC 2 cut(s) 146, 1146
XspI CTAG 4 cut(s) 281, 752, 1358, 1419
Zsp2I ATGCAT 1 cut(s) 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.