Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001676

Physical Location & Seq

Genomic Coordinates Forward (+)

48999231 .. 49004687

Gene Structure 5457 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00367080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGCGTTTTGGTGGCCTCTGATCGTCCTCGCTTTCGCTTACGCCATTTGTAGGTTCCTCTTGATGCTCATCCCTCCCAATGTGCCTTCCATTCAAGTCGACGCTTCTGACGTGTTGGACGATGGGAATCAGACGCAGGAGAACAGTTTCATATATGTACCTCCAAGGGGAAGTACACAGCAGTCGGAGACAAAGACAAAGGTTCAGTGCTATGAACCTGCAACCATGAAATACCTGGGATATTACGCTGCATTGACTCCTGTTGAGGTCAAGGAGCGGGTAGCACTAGCAAGGAAGGCACAGAAGACATGGGCAAAGAGTAGCTTCAAGCAAAGACGCCTGTTTCTTCGGATTCTTCTCAAGTATATAATAGAACACCAAGACCTTATATGTGAAATATCTTCACGTGATACGGGGAAGACAATGGTAGATGCGTCTTTAGGGGAGATAATGACAACGTGTGAGAAGATCACTTGGCTTCTTTCAGAGGGTGAGCGGTGGCTAAAGCCTGAATACAGATCTTGTGGAAGATCAATGATTCACAAGAGATCTAAAGTTGAATTCCACCCTCTTGGAGTTATTGGTGCCATTGTGTCATGGAATTATCCTTTTCACAATATCTTTAATCCAATGCTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGGTTTCAGAACATGCAAGCTGGTCTGGATACTTCTACTTCCGCATAATCCAATCTGCCCTTGCTGCTGTAGGAGCTCCTGAAAATCTAGTTGATGTCATAACAGGGTTTTCTGAAACTGGGGAAGCACTTGTGTCTTCTGTTGACAAGTTAATATTTGTTGGATCACCAGGTGTGGGTAAGATGATAATGAGAAATGCTGCTGAGACGCTTACACCAGTTACACTTGAACTTGGTGGAAAAGATGCATTTATTGTATGTGAAGATGCTGATGTGAAACATGTCGCCCAAATTGCTGTGAGAGCCGTTCTTCAGTCAAGTGGACAGAACTGTGCTGGGGCTGAGAGATTTTATGTTCACAAGGACATTTACTCTACATTTGTCAATCAAGTATCTAAGATTGTGAAATCTGTTTCAGCTGGCCCACCACTTGCTGGAAAGTATGATATGGGTGCTATATGTATGCAAGAGCACTCTGAAAGGCTTCAAAACCTTGTAAATGATGCCTTAGACAAAGGCGCAAAACTTGTTGTTCGGGGAAGTTTTGGCCATATAGGTGAAGATGCAGTTGATCACTTTTTTCCGCCTACTGTGATTGAAAATGTAAATCACACGATGAAGTTGATGCAAGAGGAGGCATTTGGACCAATCATGCCCATAATGAAGTTTAGCACTGATGAAGAGGCTGTCAAACTAGCCAATGACTCAACATATGGTCTTGGTTGTGCTGTTTTTTCTGGCAGCCAGCGTCGTGCTAGAGAGATAACTTCCCAGATACACTGTGGAGTTGCTGCAATTAATGATTTTGCATCATCGTACATGTGCCAGTCCCTGCCATTTGGTGGTGTAAAAGACAGTGGATTTGGAAGATTTGCTGGTGTCGAAGGATTGCGAGCATGTTGTCTTGTAAAATCAGTTGTTGAGGATAGATGGTGGCCCTACATCAAAACCAAGATACCAAAGCCTATTCAGTATCCTGTTGGAGAGAATGGTTTTGAGTTCCAGGAGTCACTTGTTGAAGCACTCTACGGCCTGAACATATGGGACCGACTGCGAGCATTGGTTACTGTTCTGAAGATCCTTACTGATCAAAACTCTCATGCTAGCAGCAACAGTAAGAGAAGAGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0008150 GO:0008152 GO:0012505 GO:0016491 GO:0016620 GO:0016903 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Aldedh

Protein Analysis

600

Amino Acids

66.57

Weight (kDa)

7.17

Isoelectric Point (pI)

40.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	62 - 529	1.1e-124	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001676)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G66658 AT3G66658
fragaria_vesca	FvH4_4g19600
malus_domestica	MD13G1155400.v1.1 MD16G1154800.v1.1
prunus_persica	Prupe.1G118500_v2.0.a1 Prupe.1G118500_v2.0.a1
pyrus_communis	pycom13g13230 pycom16g13120
rosa_chinensis	RchiOBHm_Chr1g0319361 RchiOBHm_Chr3g0485871 RchiOBHm_Chr4g0424861
rosa_laevigata	RLG00000007414 RLG00000030077
rosa_multiflora	Rmu_sc0005870.1_g000002 Rmu_sc0006754.1_g000006 Rmu_sc0014506.1_g000007 Rmu_sc0016377.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225740 Rroxscaffold_4G00328540 Rroxscaffold_5G00367080
rosa_rugosa	Rorug01G0166300 Rorug02G0293100 Rorug02G0554900 Rorug04G0192400 Rorug04G0199800 Rorug04G0346500
rosa_samantha	Rh1BG349600 Rh1CG003900 Rh1CG038200 Rh1DG031700 Rh1DG139100 Rh1DG263900 Rh2AG629500 Rh2CG592700 Rh2DG371100 Rh2DG650900 Rh2DG656600 Rh3AG263700 Rh3CG371400 Rh4AG036400 Rh4AG043400 Rh4AG077000 Rh4AG257500 Rh4CG273800 Rh4DG258600 Rh7BG306900
rosa_wichuraiana	Rw1G003140 Rw4G022220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	226
AccB1I	GGYRCC	1 cut(s)	584
AccB7I	CCANNNNNTGG	2 cut(s)	1103, 1511
AccBSI	CCGCTC	2 cut(s)	277, 496
AccI	GTMKAC	1 cut(s)	99
AciI	CCGC	4 cut(s)	277, 496, 712, 1253
AclWI	GGATC	2 cut(s)	841, 1741
AcoI	YGGCCR	1 cut(s)	1216
AcsI	RAATTY	1 cut(s)	560
AcuI	CTGAAG	2 cut(s)	965, 1763
AcvI	CACGTG	1 cut(s)	407
AcyI	GRCGYC	1 cut(s)	337
AdeI	CACNNNGTG	1 cut(s)	842
AfaI	GTAC	3 cut(s)	159, 175, 1487
AfiI	CCNNNNNNNGG	5 cut(s)	51, 167, 845, 1103, 1511
AflIII	ACRYGT	4 cut(s)	111, 458, 949, 1488
AgsI	TTSAA	7 cut(s)	95, 328, 560, 899, 1157, 1268, 1688
AjiI	CACGTC	1 cut(s)	112
AjnI	CCWGG	3 cut(s)	234, 838, 1671
AluBI	AGCT	4 cut(s)	324, 690, 746, 1088
AluI	AGCT	4 cut(s)	324, 690, 746, 1088
Alw21I	GWGCWC	2 cut(s)	748, 1143
Alw26I	GTCTC	2 cut(s)	182, 869
AlwI	GGATC	2 cut(s)	841, 1741
AlwNI	CAGNNNCTG	1 cut(s)	1501
AoxI	GGCC	5 cut(s)	14, 1090, 1216, 1604, 1699
ApeKI	GCWGC	7 cut(s)	248, 638, 734, 869, 1410, 1460, 1776
ApoI	RAATTY	1 cut(s)	560
ArsI	GACNNNNNNTTYG	2 cut(s)	1514, 1546
AseI	ATTAAT	1 cut(s)	1467
Asp700I	GAANNNNTTC	2 cut(s)	146, 1152
AspLEI	GCGC	1 cut(s)	1190
AspS9I	GGNCC	4 cut(s)	1091, 1313, 1605, 1714
AsuHPI	GGTGA	3 cut(s)	503, 828, 1238
AsuNHI	GCTAGC	1 cut(s)	1772
AvaII	GGWCC	2 cut(s)	1313, 1714
BalI	TGGCCA	1 cut(s)	1218
BanI	GGYRCC	1 cut(s)	584
BanII	GRGCYC	1 cut(s)	748
BbrPI	CACGTG	1 cut(s)	407
BbsI	GAAGAC	3 cut(s)	311, 425, 798
Bbv12I	GWGCWC	2 cut(s)	748, 1143
BbvI	GCAGC	7 cut(s)	235, 650, 721, 856, 1422, 1447, 1788
BccI	CCATC	2 cut(s)	116, 1593
BceAI	ACGGC	2 cut(s)	959, 1714
BciT130I	CCWGG	3 cut(s)	236, 840, 1673
BciVI	GTATCC	2 cut(s)	692, 1653
BclI	TGATCA	2 cut(s)	1240, 1756
BcoDI	GTCTC	2 cut(s)	182, 869
BfaI	CTAG	5 cut(s)	287, 758, 1364, 1425, 1773
BfmI	CTRYAG	1 cut(s)	738
BfuAI	ACCTGC	1 cut(s)	226
BfuI	GTATCC	2 cut(s)	692, 1653
BglII	AGATCT	2 cut(s)	518, 548
BisI	GCNGC	7 cut(s)	249, 639, 735, 870, 1411, 1461, 1777
BlsI	GCNGC	7 cut(s)	250, 640, 736, 871, 1412, 1462, 1778
Bme1390I	CCNGG	3 cut(s)	236, 840, 1673
Bme18I	GGWCC	2 cut(s)	1313, 1714
BmgBI	CACGTC	1 cut(s)	112
BmgT120I	GGNCC	4 cut(s)	1091, 1313, 1605, 1714
BmiI	GGNNCC	3 cut(s)	56, 586, 1715
BmrFI	CCNGG	3 cut(s)	236, 840, 1673
BmrI	ACTGGG	1 cut(s)	798
BmsI	GCATC	8 cut(s)	54, 421, 904, 925, 1162, 1222, 1284, 1487
BmtI	GCTAGC	1 cut(s)	1776
BmuI	ACTGGG	1 cut(s)	798
BpiI	GAAGAC	3 cut(s)	311, 425, 798
BpuEI	CTTGAG	1 cut(s)	344
BsaAI	YACGTR	1 cut(s)	407
BsaBI	GATNNNNATC	2 cut(s)	68, 126
BsaHI	GRCGYC	1 cut(s)	337
BsaJI	CCNNGG	2 cut(s)	164, 235
Bsc4I	CCNNNNNNNGG	5 cut(s)	51, 167, 845, 1103, 1511
Bse1I	ACTGG	3 cut(s)	793, 887, 1495
Bse8I	GATNNNNATC	2 cut(s)	68, 126
BseBI	CCWGG	3 cut(s)	236, 840, 1673
BseDI	CCNNGG	2 cut(s)	164, 235
BseGI	GGATG	1 cut(s)	69
BseJI	GATNNNNATC	2 cut(s)	68, 126
BseLI	CCNNNNNNNGG	5 cut(s)	51, 167, 845, 1103, 1511
BseMII	CTCAG	2 cut(s)	864, 1002
BseNI	ACTGG	3 cut(s)	793, 887, 1495
BseRI	GAGGAG	1 cut(s)	1316
BseXI	GCAGC	7 cut(s)	235, 650, 721, 856, 1422, 1447, 1788
BseYI	CCCAGC	1 cut(s)	1004
BshFI	GGCC	5 cut(s)	16, 1092, 1218, 1606, 1701
BshNI	GGYRCC	1 cut(s)	584
BsiHKAI	GWGCWC	2 cut(s)	748, 1143
BslFI	GGGAC	2 cut(s)	1483, 1727
BslI	CCNNNNNNNGG	5 cut(s)	51, 167, 845, 1103, 1511
BsmAI	GTCTC	2 cut(s)	182, 869
BsmBI	CGTCTC	1 cut(s)	869
BsmFI	GGGAC	2 cut(s)	1483, 1727
BsnI	GGCC	5 cut(s)	16, 1092, 1218, 1606, 1701
Bsp1286I	GDGCHC	2 cut(s)	748, 1143
Bsp143I	GATC	9 cut(s)	21, 468, 518, 530, 548, 833, 1240, 1746, 1756
BspACI	CCGC	4 cut(s)	277, 496, 712, 1253
BspANI	GGCC	5 cut(s)	16, 1092, 1218, 1606, 1701
BspCNI	CTCAG	2 cut(s)	865, 1003
BspLI	GGNNCC	3 cut(s)	56, 586, 1715
BspMI	ACCTGC	1 cut(s)	226
BspOI	GCTAGC	1 cut(s)	1776
BspPI	GGATC	2 cut(s)	841, 1741
BspT107I	GGYRCC	1 cut(s)	584
BsrBI	CCGCTC	2 cut(s)	277, 496
BsrI	ACTGG	3 cut(s)	793, 887, 1495
BssECI	CCNNGG	2 cut(s)	164, 235
BssMI	GATC	9 cut(s)	21, 468, 518, 530, 548, 833, 1240, 1746, 1756
BssNI	GRCGYC	1 cut(s)	337
BssT1I	CCWWGG	1 cut(s)	164
Bst2UI	CCWGG	3 cut(s)	236, 840, 1673
Bst4CI	ACNGT	7 cut(s)	146, 1001, 1261, 1451, 1526, 1738, 1784
Bst6I	CTCTTC	2 cut(s)	1344, 1786
BstACI	GRCGYC	1 cut(s)	337
BstBAI	YACGTR	1 cut(s)	407
BstC8I	GCNNGC	7 cut(s)	636, 688, 1090, 1415, 1563, 1725, 1774
BstDEI	CTNAG	4 cut(s)	873, 1011, 1065, 1177
BstF5I	GGATG	1 cut(s)	69
BstHHI	GCGC	1 cut(s)	1190
BstKTI	GATC	9 cut(s)	24, 471, 521, 533, 551, 836, 1243, 1749, 1759
BstMAI	GTCTC	2 cut(s)	182, 869
BstMBI	GATC	9 cut(s)	21, 468, 518, 530, 548, 833, 1240, 1746, 1756
BstMWI	GCNNNNNNNGC	5 cut(s)	296, 734, 743, 962, 971
BstNI	CCWGG	3 cut(s)	236, 840, 1673
BstNSI	RCATGY	4 cut(s)	686, 953, 1492, 1569
BstSCI	CCNGG	3 cut(s)	234, 838, 1671
BstSFI	CTRYAG	1 cut(s)	738
BstV1I	GCAGC	7 cut(s)	235, 650, 721, 856, 1422, 1447, 1788
BstV2I	GAAGAC	3 cut(s)	311, 425, 798
BstX2I	RGATCY	3 cut(s)	518, 548, 1746
BstXI	CCANNNNNNTGG	1 cut(s)	572
BstYI	RGATCY	3 cut(s)	518, 548, 1746
BsuI	GTATCC	2 cut(s)	692, 1653
BsuRI	GGCC	5 cut(s)	16, 1092, 1218, 1606, 1701
BtrI	CACGTC	1 cut(s)	112
BtsCI	GGATG	1 cut(s)	69
BtsIMutI	CAGTG	4 cut(s)	212, 1341, 1447, 1531
BveI	ACCTGC	1 cut(s)	226
Cac8I	GCNNGC	7 cut(s)	636, 688, 1090, 1415, 1563, 1725, 1774
CaiI	CAGNNNCTG	1 cut(s)	1501
CfoI	GCGC	1 cut(s)	1190
Cfr13I	GGNCC	4 cut(s)	1091, 1313, 1605, 1714
CseI	GACGC	6 cut(s)	110, 142, 345, 423, 886, 1406
CsiI	ACCWGGT	1 cut(s)	838
Csp6I	GTAC	3 cut(s)	158, 174, 1486
CviAII	CATG	9 cut(s)	226, 309, 597, 683, 950, 1321, 1489, 1566, 1769
CviQI	GTAC	3 cut(s)	158, 174, 1486
DdeI	CTNAG	4 cut(s)	873, 1011, 1065, 1177
DpnI	GATC	9 cut(s)	23, 470, 520, 532, 550, 835, 1242, 1748, 1758
DpnII	GATC	9 cut(s)	21, 468, 518, 530, 548, 833, 1240, 1746, 1756
DraIII	CACNNNGTG	1 cut(s)	842
EaeI	YGGCCR	1 cut(s)	1216
Eam1104I	CTCTTC	2 cut(s)	1344, 1786
EarI	CTCTTC	2 cut(s)	1344, 1786
EciI	GGCGGA	1 cut(s)	1242
Ecl136II	GAGCTC	1 cut(s)	746
Eco130I	CCWWGG	1 cut(s)	164
Eco24I	GRGCYC	1 cut(s)	748
Eco47I	GGWCC	2 cut(s)	1313, 1714
Eco53kI	GAGCTC	1 cut(s)	746
Eco57I	CTGAAG	2 cut(s)	965, 1763
Eco72I	CACGTG	1 cut(s)	407
EcoICRI	GAGCTC	1 cut(s)	746
EcoRI	GAATTC	1 cut(s)	560
EcoRII	CCWGG	3 cut(s)	234, 838, 1671
EcoT14I	CCWWGG	1 cut(s)	164
EcoT22I	ATGCAT	1 cut(s)	919
EcoT38I	GRGCYC	1 cut(s)	748
ErhI	CCWWGG	1 cut(s)	164
Esp3I	CGTCTC	1 cut(s)	869
FaeI	CATG	9 cut(s)	229, 312, 600, 686, 953, 1324, 1492, 1569, 1772
FalI	AAGNNNNNCTT	2 cut(s)	308, 340
FaqI	GGGAC	2 cut(s)	1483, 1727
FatI	CATG	9 cut(s)	225, 308, 596, 682, 949, 1320, 1488, 1565, 1768
FauI	CCCGC	1 cut(s)	270
FauNDI	CATATG	2 cut(s)	1381, 1709
FbaI	TGATCA	2 cut(s)	1240, 1756
FblI	GTMKAC	1 cut(s)	99
Fnu4HI	GCNGC	7 cut(s)	249, 639, 735, 870, 1411, 1461, 1777
FokI	GGATG	1 cut(s)	56
FriOI	GRGCYC	1 cut(s)	748
Fsp4HI	GCNGC	7 cut(s)	249, 639, 735, 870, 1411, 1461, 1777
FspBI	CTAG	5 cut(s)	287, 758, 1364, 1425, 1773
GlaI	GCGC	1 cut(s)	1189
GluI	GCNGC	7 cut(s)	249, 639, 735, 870, 1411, 1461, 1777
GsaI	CCCAGC	1 cut(s)	1008
HaeIII	GGCC	5 cut(s)	16, 1092, 1218, 1606, 1701
HgaI	GACGC	6 cut(s)	110, 142, 345, 423, 886, 1406
HhaI	GCGC	1 cut(s)	1190
Hin1I	GRCGYC	1 cut(s)	337
Hin1II	CATG	9 cut(s)	229, 312, 600, 686, 953, 1324, 1492, 1569, 1772
Hin6I	GCGC	1 cut(s)	1188
HinP1I	GCGC	1 cut(s)	1188
HincII	GTYRAC	2 cut(s)	100, 814
HindII	GTYRAC	2 cut(s)	100, 814
HinfI	GANTC	6 cut(s)	127, 256, 352, 538, 1373, 1676
HphI	GGTGA	3 cut(s)	503, 828, 1238
Hpy166II	GTNNAC	5 cut(s)	100, 176, 814, 992, 1027
Hpy188III	TCNNGA	4 cut(s)	61, 651, 696, 749
Hpy8I	GTNNAC	5 cut(s)	100, 176, 814, 992, 1027
Hpy99I	CGWCG	2 cut(s)	104, 1422
HpyAV	CCTTC	3 cut(s)	96, 289, 1547
HpyCH4III	ACNGT	7 cut(s)	146, 1001, 1261, 1451, 1526, 1738, 1784
HpyCH4IV	ACGT	3 cut(s)	111, 406, 458
HpyCH4V	TGCA	9 cut(s)	221, 251, 686, 917, 1135, 1235, 1297, 1463, 1478
HpyF10VI	GCNNNNNNNGC	5 cut(s)	296, 734, 743, 962, 971
HpyF3I	CTNAG	4 cut(s)	873, 1011, 1065, 1177
HpySE526I	ACGT	3 cut(s)	111, 406, 458
Hsp92I	GRCGYC	1 cut(s)	337
Hsp92II	CATG	9 cut(s)	229, 312, 600, 686, 953, 1324, 1492, 1569, 1772
HspAI	GCGC	1 cut(s)	1188
Ksp22I	TGATCA	2 cut(s)	1240, 1756
Kzo9I	GATC	9 cut(s)	21, 468, 518, 530, 548, 833, 1240, 1746, 1756
LmnI	GCTCC	3 cut(s)	274, 743, 751
Lsp1109I	GCAGC	7 cut(s)	235, 650, 721, 856, 1422, 1447, 1788
LweI	GCATC	8 cut(s)	54, 421, 904, 925, 1162, 1222, 1284, 1487
MabI	ACCWGGT	1 cut(s)	838
MaeI	CTAG	5 cut(s)	287, 758, 1364, 1425, 1773
MaeII	ACGT	3 cut(s)	111, 406, 458
MaeIII	GTNAC	3 cut(s)	889, 1677, 1732
MalI	GATC	9 cut(s)	23, 470, 520, 532, 550, 835, 1242, 1748, 1758
MbiI	CCGCTC	2 cut(s)	277, 496
MboI	GATC	9 cut(s)	21, 468, 518, 530, 548, 833, 1240, 1746, 1756
MflI	RGATCY	3 cut(s)	518, 548, 1746
MhlI	GDGCHC	2 cut(s)	748, 1143
MlsI	TGGCCA	1 cut(s)	1218
MluCI	AATT	4 cut(s)	560, 601, 960, 1464
MluNI	TGGCCA	1 cut(s)	1218
MlyI	GAGTC	3 cut(s)	250, 1367, 1685
MmeI	TCCRAC	4 cut(s)	96, 165, 811, 1630
Mox20I	TGGCCA	1 cut(s)	1218
Mph1103I	ATGCAT	1 cut(s)	919
MroXI	GAANNNNTTC	2 cut(s)	146, 1152
MscI	TGGCCA	1 cut(s)	1218
MseI	TTAA	4 cut(s)	624, 669, 821, 1467
MslI	CAYNNNNRTG	1 cut(s)	1224
Msp20I	TGGCCA	1 cut(s)	1218
MspA1I	CMGCKG	1 cut(s)	1088
MspR9I	CCNGG	3 cut(s)	236, 840, 1673
MvaI	CCWGG	3 cut(s)	236, 840, 1673
MwoI	GCNNNNNNNGC	5 cut(s)	296, 734, 743, 962, 971
NdeI	CATATG	2 cut(s)	1381, 1709
NdeII	GATC	9 cut(s)	21, 468, 518, 530, 548, 833, 1240, 1746, 1756
NheI	GCTAGC	1 cut(s)	1772
NlaIII	CATG	9 cut(s)	229, 312, 600, 686, 953, 1324, 1492, 1569, 1772
NlaIV	GGNNCC	3 cut(s)	56, 586, 1715
NmuCI	GTSAC	1 cut(s)	1677
NsiI	ATGCAT	1 cut(s)	919
NspI	RCATGY	4 cut(s)	686, 953, 1492, 1569
PciI	ACATGT	2 cut(s)	949, 1488
PcsI	WCGNNNNNNNCGW	2 cut(s)	108, 117
PdmI	GAANNNNTTC	2 cut(s)	146, 1152
PfeI	GAWTC	3 cut(s)	127, 352, 538
PflMI	CCANNNNNTGG	2 cut(s)	1103, 1511
PfoI	TCCNGGA	1 cut(s)	1671
PkrI	GCNGC	7 cut(s)	250, 640, 736, 871, 1412, 1462, 1778
PleI	GAGTC	3 cut(s)	250, 1367, 1684
PmaCI	CACGTG	1 cut(s)	407
PmlI	CACGTG	1 cut(s)	407
PpsI	GAGTC	3 cut(s)	250, 1367, 1684
Ppu21I	YACGTR	1 cut(s)	407
PscI	ACATGT	2 cut(s)	949, 1488
PshBI	ATTAAT	1 cut(s)	1467
Psp124BI	GAGCTC	1 cut(s)	748
Psp6I	CCWGG	3 cut(s)	234, 838, 1671
PspCI	CACGTG	1 cut(s)	407
PspFI	CCCAGC	1 cut(s)	1004
PspGI	CCWGG	3 cut(s)	234, 838, 1671
PspN4I	GGNNCC	3 cut(s)	56, 586, 1715
PspPI	GGNCC	4 cut(s)	1091, 1313, 1605, 1714
PstNI	CAGNNNCTG	1 cut(s)	1501
PsuI	RGATCY	3 cut(s)	518, 548, 1746
PvuII	CAGCTG	1 cut(s)	1088
RsaI	GTAC	3 cut(s)	159, 175, 1487
RsaNI	GTAC	3 cut(s)	158, 174, 1486
RseI	CAYNNNNRTG	1 cut(s)	1224
SacI	GAGCTC	1 cut(s)	748
SalI	GTCGAC	1 cut(s)	98
SaqAI	TTAA	4 cut(s)	624, 669, 821, 1467
SatI	GCNGC	7 cut(s)	249, 639, 735, 870, 1411, 1461, 1777
Sau3AI	GATC	9 cut(s)	21, 468, 518, 530, 548, 833, 1240, 1746, 1756
Sau96I	GGNCC	4 cut(s)	1091, 1313, 1605, 1714
SchI	GAGTC	3 cut(s)	250, 1367, 1685
ScrFI	CCNGG	3 cut(s)	236, 840, 1673
SduI	GDGCHC	2 cut(s)	748, 1143
SexAI	ACCWGGT	1 cut(s)	838
SfaNI	GCATC	8 cut(s)	54, 421, 904, 925, 1162, 1222, 1284, 1487
SfcI	CTRYAG	1 cut(s)	738
SinI	GGWCC	2 cut(s)	1313, 1714
SmiMI	CAYNNNNRTG	1 cut(s)	1224
SmlI	CTYRAG	1 cut(s)	359
SmoI	CTYRAG	1 cut(s)	359
Sse9I	AATT	4 cut(s)	560, 601, 960, 1464
SsiI	CCGC	4 cut(s)	277, 496, 712, 1253
SspI	AATATT	1 cut(s)	825
SspMI	CTAG	5 cut(s)	287, 758, 1364, 1425, 1773
SstI	GAGCTC	1 cut(s)	748
StyD4I	CCNGG	3 cut(s)	234, 838, 1671
StyI	CCWWGG	1 cut(s)	164
TaaI	ACNGT	7 cut(s)	146, 1001, 1261, 1451, 1526, 1738, 1784
TaiI	ACGT	3 cut(s)	114, 409, 461
TaqI	TCGA	2 cut(s)	99, 1551
TaqII	GACCGA	1 cut(s)	1731
TasI	AATT	4 cut(s)	560, 601, 960, 1464
TatI	WGTACW	1 cut(s)	173
TfiI	GAWTC	3 cut(s)	127, 352, 538
Tru1I	TTAA	4 cut(s)	624, 669, 821, 1467
Tru9I	TTAA	4 cut(s)	624, 669, 821, 1467
TscAI	CASTG	4 cut(s)	212, 1348, 1454, 1531
TseFI	GTSAC	1 cut(s)	1677
TseI	GCWGC	7 cut(s)	248, 638, 734, 869, 1410, 1460, 1776
Tsp45I	GTSAC	1 cut(s)	1677
TspDTI	ATGAA	6 cut(s)	139, 228, 242, 1301, 1346, 1362
TspRI	CASTG	4 cut(s)	212, 1348, 1454, 1531
Van91I	CCANNNNNTGG	2 cut(s)	1103, 1511
VpaK11BI	GGWCC	2 cut(s)	1313, 1714
VspI	ATTAAT	1 cut(s)	1467
XapI	RAATTY	1 cut(s)	560
XceI	RCATGY	4 cut(s)	686, 953, 1492, 1569
XcmI	CCANNNNNNNNNTGG	2 cut(s)	232, 1448
XmiI	GTMKAC	1 cut(s)	99
XmnI	GAANNNNTTC	2 cut(s)	146, 1152
XspI	CTAG	5 cut(s)	287, 758, 1364, 1425, 1773
Zsp2I	ATGCAT	1 cut(s)	919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.