Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002420

Physical Location & Seq

Genomic Coordinates Forward (+)

6708466 .. 6718185

Gene Structure 9720 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0040900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGTTTGATTGGAACGACCAGGAGCTTGCTAATATAATATGGGGCGAGGGATGCGAGAGTGATGACCATATTGTGCCTTATCCCGAGGCAACTGATGATTACCGAGACAAGAAGGAACGTAACCAAGAATCTGATACCATCAAGTCTACTGAGCAGAAGGCACCTGGAGCCAAAGTTGATTTGCATGGTAGAAAGCCGGAAAGCAGTTCCAACTTCGAGACTGGTGAAGGAATTTCTAGTTCTAGATTCGAAACAGACTCATGGCCTGACTTATCCTTATCTAGTTTTGAGAAAACTGAACAACAATGCATGGGTACGGAAACCCCCGACAACTTAACTGATAATAATAATTTAGCTGAAGCAAATCAACTTGACAAAGCTGCTGAACTTTTTCAAAATTCCAATGAAGCTAAAGAACAATTTGTTGACTATGGGTGGGCTAATATAGGAAGTTTTGATGATCTTGATCAAATTTTCAGCAATGATGACACTATATTTAGCCAAGTAAGTCTTGGAAATGTGGATGAGCTGTGGTCTTCTAAAGATGCGACTGATAGTCCAATCAAAGCATTTCCTGTGACTTCAGACTCACCAAGTTCCGGGTCAGGAGCACTGAGGAATGTGTCAGAGCATGCGGAAATTAAAACAGAAATTGTGCAGCAAGATGAGCGGGCAATTTCCCCTGGCTATGGGAAGACAGATTTTTCTGCATCTCATGGTCTACAGAATGCCCCTGCAACTCTTGATCATGTAGAATATGCTGTGGGAAAAAGTAAGCCCACAGAAAAGGAGCAGACAGGGTCGGACTTGGGCAACAGCACTGTAACAAATTCTTACCAGGCTGCTGTAAATTCTTCTTCGTCAACTGAAATTCCTGACAAGGTTTCCAGGCAGAGAAAATTTTTGAGGTCTCGTAAAAAGTTGGAGGACAAAAATGAAGGGAAATCATTGCAAGATTTTTATGGTAGCTGGTCTTCAACAAGAAACCCTTCTGGACAATTTGATAACCAGTTGCCAAGCCTTATGGTTCAATCTTCTCCCACTTCAGTTCTTGGTCACAAGAGACAGCTTCAAGGACCTGAGTCTTTTCCATACCAGCCTGTGTCTAATCAATTTGTGTCTCAGACTATGTATGGGACTCTCACTAATGCATGCCAGGCTACACCGGTGCTTTCTCACACTCAGCCTGGGCAGATTAAACATCAAAATTTTCTTTCTGGTTCAGACATTTCTCCGGGTAGTGCTAGAAACAAGTCAGCAGATACTTGTGCCAAGCCAACTATGACTACTCAGGAAAAAATTGAAAAGTTAAGAAGGCGGCAGCAACTGCAGGCAATGCTTGCTATTAGAAAACAACAGCAACAATTTAGCCATCAAGTCTCATGCACCAATCAGCCTACCACACAAAAGTGTCCCCAAGAAAATCAAATTCAGCACTCTGAGAGAGCTGATCTGGAAGTTGAAGATTTAAGCACTTTTCCTTCTCTGGACCCAAATTCACCCATAGAACAAGATGATTCAAATACAGTTTCTGCAGCAGTTGAATATTACTCAGCGGAGGACACAATACTCTACAGGCTTCAAGATATTATAGCAAAGTTGGACATCAAAACGAGACTTTGCATACGGGATAGCTTGTTGCGGTTAGCTCAAAGTGCAGTGCAAAGGCATCATACAAGTGATACTAGCAGTTCCAACAGAAACAGCAAGGATGAGCCTGAAATTGTTGCAAAGGAGGAAATCGGCGGTTGTAACAGGTACACCAGCATGCCAGATGTTGAGACCGAGACCAATCCTATAGACCGAACTGTGGCTCATTTGCTCTTTCATCGCCCGTTGGATCTATCAGGAAAACATTCTGGTGCACCAGAATCACCTGCTTCTACTAAGATGCCATTTGAACGCAAAACAGCAGGCTTAGCGAGCTTGTCAAACGGAGTATTGCTCGACAGTTTGAACAAATCAAACTATTCTCATCAAGAATCTGGAAATTATTGCCCAGATCCTGAGCCCCAGTCTGCGGATCAGAACTTGCCTTGCATGAACAAGTCAGAAAACCTATCGAACAATGGGTCAGCAGATGGTGGAACCATGGAGGTCGAAGCCTCTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Prolamin_like

Protein Analysis

704

Amino Acids

77.7

Weight (kDa)

4.85

Isoelectric Point (pI)

51.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14378 AT2G27315 AT3G48675 AT4G35165 AT5G52965 AT5G52975 AT5G53742 AT5G53905 AT5G54062
malus_domestica	MD02G1018800.v1.1 MD09G1163700.v1.1 MD09G1164100.v1.1 MD09G1164600.v1.1 MD17G1163700.v1.1
pyrus_communis	pycom09g08120 pycom17g15680
rosa_chinensis	RchiOBHm_Chr1g0323971 RchiOBHm_Chr2g0149601
rosa_laevigata	RLG00000020428 RLG00000030237
rosa_multiflora	Rmu_sc0002529.1_g000027 Rmu_sc0006175.1_g000021 Rmu_sc0006867.1_g000025
rosa_roxburghii	Rroxscaffold_2G00097920 Rroxscaffold_2G00097930 Rroxscaffold_4G00326000 Rroxscaffold_4G00326030
rosa_rugosa	Rorug01G0040900 Rorug02G0412900.1 Rorug02G0413000 Rorug02G0413200 Rorug02G0413300
rosa_samantha	Rh1AG058800 Rh1DG064700 Rh2AG473400 Rh2AG473500 Rh2BG485300 Rh2CG459100 Rh2CG459200 Rh2DG494500
rosa_wichuraiana	Rw2G038600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1885
Acc36I	ACCTGC	1 cut(s)	1885
AccB1I	GGYRCC	1 cut(s)	160
AccBSI	CCGCTC	1 cut(s)	670
AccI	GTMKAC	2 cut(s)	146, 721
AciI	CCGC	7 cut(s)	635, 670, 1318, 1556, 1642, 1746, 2021
AclWI	GGATC	3 cut(s)	1848, 1997, 2031
AcuI	CTGAAG	3 cut(s)	378, 567, 1029
AfaI	GTAC	2 cut(s)	316, 1760
AfiI	CCNNNNNNNGG	4 cut(s)	599, 689, 1810, 2020
AgeI	ACCGGT	1 cut(s)	1165
AhdI	GACNNNNNGTC	1 cut(s)	555
AjnI	CCWGG	7 cut(s)	18, 163, 682, 837, 887, 1155, 1186
AleI	CACNNNNGTG	1 cut(s)	1408
Alw21I	GWGCWC	2 cut(s)	613, 1867
Alw26I	GTCTC	9 cut(s)	99, 212, 915, 1057, 1125, 1384, 1609, 1775, 1781
Alw44I	GTGCAC	1 cut(s)	1863
AlwI	GGATC	3 cut(s)	1848, 1997, 2031
AlwNI	CAGNNNCTG	3 cut(s)	1327, 1532, 2006
Ama87I	CYCGRG	1 cut(s)	83
AoxI	GGCC	1 cut(s)	263
ApaLI	GTGCAC	1 cut(s)	1863
ApeKI	GCWGC	5 cut(s)	380, 658, 842, 1321, 1535
ArsI	GACNNNNNNTTYG	2 cut(s)	2057, 2089
AsiGI	ACCGGT	1 cut(s)	1165
Asp700I	GAANNNNTTC	3 cut(s)	390, 988, 1855
AspS9I	GGNCC	2 cut(s)	1076, 1489
AsuC2I	CCSGG	2 cut(s)	601, 1236
AsuHPI	GGTGA	4 cut(s)	236, 582, 1491, 1866
AsuII	TTCGAA	1 cut(s)	249
AvaI	CYCGRG	1 cut(s)	83
AvaII	GGWCC	2 cut(s)	1076, 1489
BaeGI	GKGCMC	1 cut(s)	1867
BanI	GGYRCC	1 cut(s)	160
BanII	GRGCYC	1 cut(s)	2013
BarI	GAAGNNNNNNTAC	2 cut(s)	958, 990
BbsI	GAAGAC	3 cut(s)	528, 701, 966
Bbv12I	GWGCWC	2 cut(s)	613, 1867
BbvI	GCAGC	5 cut(s)	367, 670, 829, 1333, 1547
BccI	CCATC	3 cut(s)	146, 1380, 2075
BciT130I	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
BclI	TGATCA	2 cut(s)	466, 745
BcnI	CCSGG	2 cut(s)	601, 1236
BcoDI	GTCTC	9 cut(s)	99, 212, 915, 1057, 1125, 1384, 1609, 1775, 1781
BfaI	CTAG	5 cut(s)	237, 243, 282, 1245, 1686
BfmI	CTRYAG	5 cut(s)	722, 1328, 1533, 1573, 1797
BfuAI	ACCTGC	1 cut(s)	1885
BisI	GCNGC	6 cut(s)	381, 659, 843, 1319, 1322, 1536
BlpI	GCTNAGC	1 cut(s)	1918
BlsI	GCNGC	6 cut(s)	382, 660, 844, 1320, 1323, 1537
Bme1390I	CCNGG	9 cut(s)	20, 165, 601, 684, 839, 889, 1157, 1188, 1236
Bme18I	GGWCC	2 cut(s)	1076, 1489
BmeRI	GACNNNNNGTC	1 cut(s)	555
BmeT110I	CYCGRG	1 cut(s)	83
BmgT120I	GGNCC	2 cut(s)	1076, 1489
BmiI	GGNNCC	4 cut(s)	162, 169, 1491, 2089
BmrFI	CCNGG	9 cut(s)	20, 165, 601, 684, 839, 889, 1157, 1188, 1236
BmrI	ACTGGG	1 cut(s)	2008
BmsI	GCATC	5 cut(s)	41, 535, 719, 1678, 1881
BmuI	ACTGGG	1 cut(s)	2008
BoxI	GACNNNNGTC	1 cut(s)	1081
BpiI	GAAGAC	3 cut(s)	528, 701, 966
BplI	GAGNNNNNCTC	2 cut(s)	1929, 1961
BpmI	CTGGAG	1 cut(s)	186
Bpu10I	CCTNAGC	1 cut(s)	2007
Bpu1102I	GCTNAGC	1 cut(s)	1918
Bpu14I	TTCGAA	1 cut(s)	249
BpuMI	CCSGG	2 cut(s)	601, 1236
BsaBI	GATNNNNATC	1 cut(s)	465
BsaI	GGTCTC	3 cut(s)	915, 1775, 1781
BsaJI	CCNNGG	4 cut(s)	84, 682, 1187, 2091
BsaWI	WCCGGW	1 cut(s)	1165
BsaXI	ACNNNNNCTCC	2 cut(s)	159, 189
Bsc4I	CCNNNNNNNGG	4 cut(s)	599, 689, 1810, 2020
Bse118I	RCCGGY	1 cut(s)	1165
Bse1I	ACTGG	3 cut(s)	226, 1009, 2014
Bse3DI	GCAATG	3 cut(s)	487, 947, 1341
Bse8I	GATNNNNATC	1 cut(s)	465
BseBI	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
BseDI	CCNNGG	4 cut(s)	84, 682, 1187, 2091
BseGI	GGATG	3 cut(s)	56, 529, 1717
BseJI	GATNNNNATC	1 cut(s)	465
BseLI	CCNNNNNNNGG	4 cut(s)	599, 689, 1810, 2020
BseMI	GCAATG	3 cut(s)	487, 947, 1341
BseMII	CTCAG	9 cut(s)	141, 605, 1071, 1136, 1196, 1304, 1431, 1566, 1998
BseNI	ACTGG	3 cut(s)	226, 1009, 2014
BseSI	GKGCMC	1 cut(s)	1867
BseXI	GCAGC	5 cut(s)	367, 670, 829, 1333, 1547
BsgI	GTGCAG	2 cut(s)	677, 1677
BshFI	GGCC	1 cut(s)	265
BshNI	GGYRCC	1 cut(s)	160
BshTI	ACCGGT	1 cut(s)	1165
BsiHKAI	GWGCWC	2 cut(s)	613, 1867
BsiHKCI	CYCGRG	1 cut(s)	83
BsiSI	CCGG	4 cut(s)	197, 600, 1166, 1235
BslFI	GGGAC	2 cut(s)	1150, 1398
BslI	CCNNNNNNNGG	4 cut(s)	599, 689, 1810, 2020
BsmAI	GTCTC	9 cut(s)	99, 212, 915, 1057, 1125, 1384, 1609, 1775, 1781
BsmFI	GGGAC	2 cut(s)	1150, 1398
BsmI	GAATGC	1 cut(s)	733
BsnI	GGCC	1 cut(s)	265
Bso31I	GGTCTC	3 cut(s)	915, 1775, 1781
BsoBI	CYCGRG	1 cut(s)	83
Bsp119I	TTCGAA	1 cut(s)	249
Bsp1286I	GDGCHC	3 cut(s)	613, 1867, 2013
Bsp143I	GATC	7 cut(s)	460, 466, 745, 1450, 1840, 2002, 2023
Bsp1720I	GCTNAGC	1 cut(s)	1918
Bsp19I	CCATGG	1 cut(s)	2091
BspACI	CCGC	7 cut(s)	635, 670, 1318, 1556, 1642, 1746, 2021
BspANI	GGCC	1 cut(s)	265
BspCNI	CTCAG	9 cut(s)	142, 606, 1072, 1135, 1195, 1303, 1432, 1565, 1999
BspLI	GGNNCC	4 cut(s)	162, 169, 1491, 2089
BspMAI	CTGCAG	2 cut(s)	1332, 1537
BspMI	ACCTGC	1 cut(s)	1885
BspPI	GGATC	3 cut(s)	1848, 1997, 2031
BspT104I	TTCGAA	1 cut(s)	249
BspT107I	GGYRCC	1 cut(s)	160
BspTNI	GGTCTC	3 cut(s)	915, 1775, 1781
BsrBI	CCGCTC	1 cut(s)	670
BsrDI	GCAATG	3 cut(s)	487, 947, 1341
BsrFI	RCCGGY	1 cut(s)	1165
BsrI	ACTGG	3 cut(s)	226, 1009, 2014
BssAI	RCCGGY	1 cut(s)	1165
BssECI	CCNNGG	4 cut(s)	84, 682, 1187, 2091
BssMI	GATC	7 cut(s)	460, 466, 745, 1450, 1840, 2002, 2023
BssT1I	CCWWGG	1 cut(s)	2091
Bst2UI	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
Bst4CI	ACNGT	4 cut(s)	823, 1528, 1810, 1952
BstAPI	GCANNNNNTGC	3 cut(s)	1327, 1336, 1340
BstBI	TTCGAA	1 cut(s)	249
BstC8I	GCNNGC	9 cut(s)	27, 633, 672, 1153, 1332, 1341, 1769, 1915, 1924
BstDSI	CCRYGG	1 cut(s)	2091
BstF5I	GGATG	3 cut(s)	56, 529, 1717
BstKTI	GATC	7 cut(s)	463, 469, 748, 1453, 1843, 2005, 2026
BstMAI	GTCTC	9 cut(s)	99, 212, 915, 1057, 1125, 1384, 1609, 1775, 1781
BstMBI	GATC	7 cut(s)	460, 466, 745, 1450, 1840, 2002, 2023
BstNI	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
BstNSI	RCATGY	3 cut(s)	635, 1155, 1771
BstPAI	GACNNNNGTC	1 cut(s)	1081
BstSCI	CCNGG	9 cut(s)	18, 163, 599, 682, 837, 887, 1155, 1186, 1234
BstSFI	CTRYAG	5 cut(s)	722, 1328, 1533, 1573, 1797
BstSLI	GKGCMC	1 cut(s)	1867
BstV1I	GCAGC	5 cut(s)	367, 670, 829, 1333, 1547
BstV2I	GAAGAC	3 cut(s)	528, 701, 966
BstX2I	RGATCY	2 cut(s)	1840, 2002
BstYI	RGATCY	2 cut(s)	1840, 2002
BsuRI	GGCC	1 cut(s)	265
BtgI	CCRYGG	1 cut(s)	2091
BtgZI	GCGATG	1 cut(s)	1814
BtsCI	GGATG	3 cut(s)	56, 529, 1717
BtsI	GCAGTG	1 cut(s)	1665
BtsIMutI	CAGTG	3 cut(s)	611, 819, 1665
BveI	ACCTGC	1 cut(s)	1885
Cac8I	GCNNGC	9 cut(s)	27, 633, 672, 1153, 1332, 1341, 1769, 1915, 1924
CaiI	CAGNNNCTG	3 cut(s)	1327, 1532, 2006
Cfr10I	RCCGGY	1 cut(s)	1165
Cfr13I	GGNCC	2 cut(s)	1076, 1489
Csp6I	GTAC	2 cut(s)	315, 1759
CspAI	ACCGGT	1 cut(s)	1165
CviQI	GTAC	2 cut(s)	315, 1759
DpnI	GATC	7 cut(s)	462, 468, 747, 1452, 1842, 2004, 2025
DpnII	GATC	7 cut(s)	460, 466, 745, 1450, 1840, 2002, 2023
DriI	GACNNNNNGTC	1 cut(s)	555
Eam1105I	GACNNNNNGTC	1 cut(s)	555
Eco130I	CCWWGG	1 cut(s)	2091
Eco24I	GRGCYC	1 cut(s)	2013
Eco31I	GGTCTC	3 cut(s)	915, 1775, 1781
Eco47I	GGWCC	2 cut(s)	1076, 1489
Eco57I	CTGAAG	3 cut(s)	378, 567, 1029
Eco88I	CYCGRG	1 cut(s)	83
EcoO109I	RGGNCCY	1 cut(s)	1076
EcoRII	CCWGG	7 cut(s)	18, 163, 682, 837, 887, 1155, 1186
EcoT14I	CCWWGG	1 cut(s)	2091
EcoT22I	ATGCAT	2 cut(s)	311, 1153
EcoT38I	GRGCYC	1 cut(s)	2013
ErhI	CCWWGG	1 cut(s)	2091
FalI	AAGNNNNNCTT	4 cut(s)	495, 527, 973, 1005
FaqI	GGGAC	2 cut(s)	1150, 1398
FauI	CCCGC	1 cut(s)	663
FbaI	TGATCA	2 cut(s)	466, 745
FblI	GTMKAC	2 cut(s)	146, 721
Fnu4HI	GCNGC	6 cut(s)	381, 659, 843, 1319, 1322, 1536
FokI	GGATG	3 cut(s)	63, 536, 1724
FriOI	GRGCYC	1 cut(s)	2013
Fsp4HI	GCNGC	6 cut(s)	381, 659, 843, 1319, 1322, 1536
FspBI	CTAG	5 cut(s)	237, 243, 282, 1245, 1686
GluI	GCNGC	6 cut(s)	381, 659, 843, 1319, 1322, 1536
GsuI	CTGGAG	1 cut(s)	186
HaeIII	GGCC	1 cut(s)	265
HapII	CCGG	4 cut(s)	197, 600, 1166, 1235
HincII	GTYRAC	2 cut(s)	427, 864
HindII	GTYRAC	2 cut(s)	427, 864
HinfI	GANTC	9 cut(s)	128, 246, 257, 587, 1082, 1138, 1517, 1871, 1982
HpaII	CCGG	4 cut(s)	197, 600, 1166, 1235
HphI	GGTGA	4 cut(s)	236, 582, 1491, 1866
Hpy166II	GTNNAC	6 cut(s)	147, 427, 722, 864, 1761, 1865
Hpy188I	TCNGA	9 cut(s)	133, 586, 628, 805, 1125, 1225, 1441, 2028, 2053
Hpy8I	GTNNAC	6 cut(s)	147, 427, 722, 864, 1761, 1865
HpyAV	CCTTC	7 cut(s)	106, 151, 221, 932, 999, 1308, 1491
HpyCH4III	ACNGT	4 cut(s)	823, 1528, 1810, 1952
HpyCH4IV	ACGT	1 cut(s)	118
HpySE526I	ACGT	1 cut(s)	118
Ksp22I	TGATCA	2 cut(s)	466, 745
Kzo9I	GATC	7 cut(s)	460, 466, 745, 1450, 1840, 2002, 2023
LmnI	GCTCC	4 cut(s)	22, 167, 608, 790
Lsp1109I	GCAGC	5 cut(s)	367, 670, 829, 1333, 1547
LweI	GCATC	5 cut(s)	41, 535, 719, 1678, 1881
MaeI	CTAG	5 cut(s)	237, 243, 282, 1245, 1686
MaeII	ACGT	1 cut(s)	118
MaeIII	GTNAC	5 cut(s)	119, 577, 823, 1055, 1751
MalI	GATC	7 cut(s)	462, 468, 747, 1452, 1842, 2004, 2025
MbiI	CCGCTC	1 cut(s)	670
MboI	GATC	7 cut(s)	460, 466, 745, 1450, 1840, 2002, 2023
MboII	GAAGA	7 cut(s)	528, 706, 846, 849, 966, 1026, 1475
MflI	RGATCY	2 cut(s)	1840, 2002
MhlI	GDGCHC	3 cut(s)	613, 1867, 2013
MlyI	GAGTC	4 cut(s)	251, 581, 1091, 1132
MmeI	TCCRAC	6 cut(s)	234, 783, 903, 1581, 1719, 1818
MnlI	CCTC	8 cut(s)	40, 79, 609, 900, 919, 1552, 1729, 2089
Mph1103I	ATGCAT	2 cut(s)	311, 1153
MroXI	GAANNNNTTC	3 cut(s)	390, 988, 1855
MseI	TTAA	5 cut(s)	335, 642, 1197, 1310, 1469
MslI	CAYNNNNRTG	4 cut(s)	1408, 1677, 1766, 1860
MspA1I	CMGCKG	1 cut(s)	1556
MspI	CCGG	4 cut(s)	197, 600, 1166, 1235
MspR9I	CCNGG	9 cut(s)	20, 165, 601, 684, 839, 889, 1157, 1188, 1236
Mva1269I	GAATGC	1 cut(s)	733
MvaI	CCWGG	7 cut(s)	20, 165, 684, 839, 889, 1157, 1188
NciI	CCSGG	2 cut(s)	601, 1236
NcoI	CCATGG	1 cut(s)	2091
NdeII	GATC	7 cut(s)	460, 466, 745, 1450, 1840, 2002, 2023
NlaIV	GGNNCC	4 cut(s)	162, 169, 1491, 2089
NmuCI	GTSAC	2 cut(s)	577, 1055
NsiI	ATGCAT	2 cut(s)	311, 1153
NspI	RCATGY	3 cut(s)	635, 1155, 1771
NspV	TTCGAA	1 cut(s)	249
OliI	CACNNNNGTG	1 cut(s)	1408
PaeI	GCATGC	3 cut(s)	635, 1155, 1771
PaqCI	CACCTGC	1 cut(s)	1885
PctI	GAATGC	1 cut(s)	733
PdmI	GAANNNNTTC	3 cut(s)	390, 988, 1855
PfeI	GAWTC	5 cut(s)	128, 246, 1517, 1871, 1982
PflFI	GACNNNGTC	1 cut(s)	799
PinAI	ACCGGT	1 cut(s)	1165
PkrI	GCNGC	6 cut(s)	382, 660, 844, 1320, 1323, 1537
PleI	GAGTC	4 cut(s)	251, 581, 1090, 1132
PpsI	GAGTC	4 cut(s)	251, 581, 1090, 1132
PpuMI	RGGWCCY	1 cut(s)	1076
PshAI	GACNNNNGTC	1 cut(s)	1081
Psp5II	RGGWCCY	1 cut(s)	1076
Psp6I	CCWGG	7 cut(s)	18, 163, 682, 837, 887, 1155, 1186
PspGI	CCWGG	7 cut(s)	18, 163, 682, 837, 887, 1155, 1186
PspN4I	GGNNCC	4 cut(s)	162, 169, 1491, 2089
PspPI	GGNCC	2 cut(s)	1076, 1489
PspPPI	RGGWCCY	1 cut(s)	1076
PstI	CTGCAG	2 cut(s)	1332, 1537
PstNI	CAGNNNCTG	3 cut(s)	1327, 1532, 2006
PsuI	RGATCY	2 cut(s)	1840, 2002
PsyI	GACNNNGTC	1 cut(s)	799
RsaI	GTAC	2 cut(s)	316, 1760
RsaNI	GTAC	2 cut(s)	315, 1759
RseI	CAYNNNNRTG	4 cut(s)	1408, 1677, 1766, 1860
SaqAI	TTAA	5 cut(s)	335, 642, 1197, 1310, 1469
SatI	GCNGC	6 cut(s)	381, 659, 843, 1319, 1322, 1536
Sau3AI	GATC	7 cut(s)	460, 466, 745, 1450, 1840, 2002, 2023
Sau96I	GGNCC	2 cut(s)	1076, 1489
SchI	GAGTC	4 cut(s)	251, 581, 1091, 1132
ScrFI	CCNGG	9 cut(s)	20, 165, 601, 684, 839, 889, 1157, 1188, 1236
SduI	GDGCHC	3 cut(s)	613, 1867, 2013
SfaNI	GCATC	5 cut(s)	41, 535, 719, 1678, 1881
SfcI	CTRYAG	5 cut(s)	722, 1328, 1533, 1573, 1797
SfuI	TTCGAA	1 cut(s)	249
SgrAI	CRCCGGYG	1 cut(s)	1165
SinI	GGWCC	2 cut(s)	1076, 1489
SmiMI	CAYNNNNRTG	4 cut(s)	1408, 1677, 1766, 1860
SphI	GCATGC	3 cut(s)	635, 1155, 1771
SsiI	CCGC	7 cut(s)	635, 670, 1318, 1556, 1642, 1746, 2021
SspI	AATATT	1 cut(s)	1547
SspMI	CTAG	5 cut(s)	237, 243, 282, 1245, 1686
StyD4I	CCNGG	9 cut(s)	18, 163, 599, 682, 837, 887, 1155, 1186, 1234
StyI	CCWWGG	1 cut(s)	2091
TaaI	ACNGT	4 cut(s)	823, 1528, 1810, 1952
TaiI	ACGT	1 cut(s)	121
TaqI	TCGA	5 cut(s)	216, 249, 1947, 2063, 2100
TaqII	GACCGA	2 cut(s)	1799, 1818
TauI	GCSGC	1 cut(s)	1321
TfiI	GAWTC	5 cut(s)	128, 246, 1517, 1871, 1982
Tru1I	TTAA	5 cut(s)	335, 642, 1197, 1310, 1469
Tru9I	TTAA	5 cut(s)	335, 642, 1197, 1310, 1469
TscAI	CASTG	3 cut(s)	618, 826, 1665
TseFI	GTSAC	2 cut(s)	577, 1055
TseI	GCWGC	5 cut(s)	380, 658, 842, 1321, 1535
Tsp45I	GTSAC	2 cut(s)	577, 1055
TspDTI	ATGAA	4 cut(s)	420, 951, 1817, 2057
TspGWI	ACGGA	2 cut(s)	332, 1950
TspRI	CASTG	3 cut(s)	618, 826, 1665
Tth111I	GACNNNGTC	1 cut(s)	799
VneI	GTGCAC	1 cut(s)	1863
VpaK11BI	GGWCC	2 cut(s)	1076, 1489
XbaI	TCTAGA	1 cut(s)	242
XceI	RCATGY	3 cut(s)	635, 1155, 1771
XcmI	CCANNNNNNNNNTGG	1 cut(s)	509
XmiI	GTMKAC	2 cut(s)	146, 721
XmnI	GAANNNNTTC	3 cut(s)	390, 988, 1855
XspI	CTAG	5 cut(s)	237, 243, 282, 1245, 1686
Zsp2I	ATGCAT	2 cut(s)	311, 1153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.