Rorug02G0014700

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001178
Physical Location & Seq
Reverse (-)
1241421 .. 1246415
4995 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0014700.1

Sequence Viewer

Length: 2220 bp
ATGTCAGGGTGGGACGAAGGAGCGGTGTACTACAGCGACCAAGCCCAGTCGCTGGGCGGCGACACCGACGACCCAGGAAGCAACGTCGCCGCCGCCGCCAGCCGCCACTCGGTCCTCCAGAAATTCAAGGAGTTCATCCGAAACTTCGAGACCCAGTCAAGCACGAATGTCTTCCCTTACAGAGAGAGCCTCCTCCACAACCCTAAGCACCTCGTCGTCGACATGGAGGACCTCGGCGACTTCGACTCCGATCTCCCCGCCAAGCTCCGCTCCGCCCCCGCCGATTATTTGCCTCTGTTTGAGAACGCCGCCGGACAGGTTTTGGCGAATTTGAAGACGAAGGTGGCCGGAAGCGAAGGCCAATTGGAGGAACCGGTGCCGGAGGATGTTCAGATTTTGTTGACCTCCAGAGAAGATACAACTTCCATGCGCAAGCTTGGGGCTCAAAGTATATCGAAACTCATCAAGATATCTGGGATCACGATAGCTGCATCAAGAGTCAAGGCAAAGGCGACTTATGTGATTGTGATGTGTAAGAACTGTAAAAATGTGCAAAGGGTTCCTTGTCGGCCAGGCCTTGGTGGGGCAATTGTACCTCGCACGTGTAACCATATTCCTCAGCCTGGAGAAGAACCTTGTCCACTTGATCCATGGGTTGTGGTTCCTGATAAGAGCAAGTATGTTGATCAGCAGACCTTAAAATTGCAAGAGAATCCGGAGGATGTGCCTACTGGAGAGCTTCCAAGAAATATGCTTCTATCTGTGGACCGCCATCTTGTTCAGACAATTGTGCCTGGCACAAGATTAACAATCATGGGAATTTATAGTATCTATCAAGCTTCCAATTCTTCCACCAACCACAAAGGAGCAGTTGCTGTTAGACAGCCTTACATCAGAGTAGTAGGAATTGAAGAAGCAAATGATGCCAACTCAAGAGGTCCCGCTGCTTTCACAGCTGAAGAGATAGAAGAATTTAAGAAATTTGCTGCAGAACCTGATGTATATAAAAGCATATGCTCAAAGATTGCCCCCTCTATCTTTGGTCACGAAGATGTAAAGAAGGCCGTGGCTTGTCTTCTTTTTGGGGGATCTAGAAAGCATTTGCCTGATGGTGTGAAGCTAAGAGGTGATATCAATGTCTTACTTTTGGGGGATCCATCTACTGCTAAATCACAGTTTCTCAAGTTTGTTGAGAAAACAGCTCCTGTAGCTGTTTATACTTCCGGGAAAGGCTCATCTGCAGCTGGTCTTACAGCTTCTGTGATCAGAGATAACAGCTCTCGAGAGTTTTATCTTGAAGGAGGAGCCATGGTTTTGGCAGATGGAGGTGTTGTGTGTATTGATGAGTTTGACAAAATGAGACCGGAGGATAGGGTTGCCATTCATGAAGCCATGGAGCAGCAAACCATTTCCATTGCCAAAGCAGGAATAACAACAGTTCTTAATTCTAGAACCTCTGTTCTTGCAGCTGCTAACCCTCCATCTGGACGTTATGATGATCTTAAGACTGCTCAGGATAACATAGATCTGCAGACAACAATTCTTTCTAGATTTGATTTGATCTTCATTGTTAAAGACATCAGGATGTATAGTCAGGACAAGATAATAGCAAGTCATGTAATAAAGGTTCATGCATCTGCTGGGGCAGCAGTGGGTGATAAGAGGGAGGTTTCTAAGGAGAAAGAAGAGAATTGGCTGAAGAGGTACCTTCAATACTGTCGAACTGAGTGTCATCCCCGTTTGTCAGAGTCTGCATCCAAATCACTGCAGAACCATTATGTCAAAATCAGACAGGACATGAGACAGCAGGCAAATGAAACTGGAGAGGCTGCTGCAATACCAATCACTGTAAGGCAGCTTGAAGCTATAGTGAGGTTGAGTGAGTCGCTTGCAAAAATGAAACTGTCCCATGTTGCTACAGAGGAGAACGTGACTGAAGCAGTAAGACTTTTTACTGTATCCACAATGGACGCAGCAAGATCTGGAATTTATCAACAAGTCAATATTAGTCCCGAGATGGCAAATGAAATTAAGCAAGCTGAATCTCATATTAAGAGAAGAGTGGGCATTGGGAACCACATTTCGGAGAGAAAGTTGGTTGATGAGCTCACAAGAATGGGGATGAATGAATCCATTGTAAGAAGAGCTCTTATAATTATGCACCAGAGAGATGAAGTCGAATACAAGGGAGAAAGACGCCTGATTTTACGTAAATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

739

Amino Acids

81.49

Weight (kDa)

7.26

Isoelectric Point (pI)

46.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCM_N PF14551 40 - 121 1.8e-11 MCM N-terminal domain
MCM_OB PF17207 143 - 278 1.1e-34 MCM OB domain
MCM PF00493 322 - 544 4e-102 MCM P-loop domain
MCM_lid PF17855 565 - 654 4.7e-28 MCM AAA-lid domain
MCM5_C PF21933 679 - 737 7.2e-17 MCM5, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2153
Acc16I TGCGCA 1 cut(s) 431
Acc65I GGTACC 1 cut(s) 1704
AccB1I GGYRCC 2 cut(s) 376, 1704
AccB7I CCANNNNNTGG 2 cut(s) 52, 578
AccBSI CCGCTC 2 cut(s) 23, 270
AccI GTMKAC 1 cut(s) 219
AccIII TCCGGA 1 cut(s) 715
AclWI GGATC 5 cut(s) 485, 641, 1096, 1148, 1161
AcoI YGGCCR 2 cut(s) 345, 569
AcsI RAATTY 6 cut(s) 122, 328, 819, 971, 980, 1986
AcuI CTGAAG 3 cut(s) 978, 1718, 1956
AcvI CACGTG 1 cut(s) 603
AcyI GRCGYC 1 cut(s) 2197
AfaI GTAC 3 cut(s) 29, 594, 1706
AfiI CCNNNNNNNGG 8 cut(s) 52, 109, 367, 578, 583, 623, 1484, 2083
AflII CTTAAG 1 cut(s) 1502
AflIII ACRYGT 1 cut(s) 602
AgeI ACCGGT 1 cut(s) 373
AgsI TTSAA 6 cut(s) 127, 334, 911, 1298, 1712, 1862
AjnI CCWGG 4 cut(s) 73, 571, 622, 793
Alw21I GWGCWC 2 cut(s) 2109, 2149
Alw26I GTCTC 3 cut(s) 143, 1354, 1795
AlwI GGATC 5 cut(s) 485, 641, 1096, 1148, 1161
AlwNI CAGNNNCTG 6 cut(s) 52, 875, 995, 1205, 1259, 1751
Ama87I CYCGRG 2 cut(s) 1281, 2012
Aor13HI TCCGGA 1 cut(s) 715
AoxI GGCC 5 cut(s) 345, 358, 569, 574, 1062
ApoI RAATTY 6 cut(s) 122, 328, 819, 971, 980, 1986
ArsI GACNNNNNNTTYG 2 cut(s) 1714, 1746
AsiGI ACCGGT 1 cut(s) 373
Asp700I GAANNNNTTC 1 cut(s) 170
Asp718I GGTACC 1 cut(s) 1704
AspLEI GCGC 1 cut(s) 432
AspS9I GGNCC 4 cut(s) 112, 229, 766, 938
AsuC2I CCSGG 1 cut(s) 1225
AsuHPI GGTGA 2 cut(s) 1139, 1667
AvaI CYCGRG 2 cut(s) 1281, 2012
AvaII GGWCC 4 cut(s) 112, 229, 766, 938
BamHI GGATCC 1 cut(s) 1153
BanI GGYRCC 2 cut(s) 376, 1704
BanII GRGCYC 3 cut(s) 445, 2109, 2149
BbrPI CACGTG 1 cut(s) 603
BbsI GAAGAC 3 cut(s) 163, 341, 1067
Bbv12I GWGCWC 2 cut(s) 2109, 2149
BbvCI CCTCAGC 1 cut(s) 618
BccI CCATC 6 cut(s) 780, 1103, 1165, 1316, 1489, 2011
BceAI ACGGC 1 cut(s) 1049
BciT130I CCWGG 4 cut(s) 75, 573, 624, 795
BciVI GTATCC 1 cut(s) 1969
BclI TGATCA 2 cut(s) 685, 1263
BcnI CCSGG 1 cut(s) 1225
BcoDI GTCTC 3 cut(s) 143, 1354, 1795
BfaI CTAG 3 cut(s) 1092, 1449, 1548
BfmI CTRYAG 8 cut(s) 31, 987, 1206, 1239, 1529, 1766, 1866, 1917
BfrI CTTAAG 1 cut(s) 1502
BfuI GTATCC 1 cut(s) 1969
BglII AGATCT 2 cut(s) 1525, 1979
Bme1390I CCNGG 5 cut(s) 75, 573, 624, 795, 1225
Bme18I GGWCC 4 cut(s) 112, 229, 766, 938
BmeT110I CYCGRG 2 cut(s) 1281, 2012
BmgT120I GGNCC 4 cut(s) 112, 229, 766, 938
BmiI GGNNCC 9 cut(s) 372, 378, 561, 663, 940, 1155, 1306, 1706, 2075
BmrFI CCNGG 5 cut(s) 75, 573, 624, 795, 1225
BmrI ACTGGG 2 cut(s) 40, 148
BmsI GCATC 4 cut(s) 500, 913, 1643, 1763
BmuI ACTGGG 2 cut(s) 40, 148
BpiI GAAGAC 3 cut(s) 163, 341, 1067
BplI GAGNNNNNCTC 2 cut(s) 174, 206
BpmI CTGGAG 5 cut(s) 101, 391, 645, 753, 1842
Bpu10I CCTNAGC 3 cut(s) 204, 618, 1512
BpuEI CTTGAG 2 cut(s) 916, 1166
BpuMI CCSGG 1 cut(s) 1225
BsaAI YACGTR 2 cut(s) 603, 2210
BsaHI GRCGYC 1 cut(s) 2197
BsaI GGTCTC 2 cut(s) 143, 1354
BsaJI CCNNGG 7 cut(s) 73, 232, 577, 650, 1065, 1308, 1392
BsaWI WCCGGW 3 cut(s) 373, 715, 1363
BsaXI ACNNNNNCTCC 8 cut(s) 230, 260, 1296, 1317, 1326, 1347, 2078, 2108
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 109, 367, 578, 583, 623, 1484, 2083
Bse118I RCCGGY 1 cut(s) 373
Bse1I ACTGG 4 cut(s) 46, 154, 736, 1825
Bse3DI GCAATG 1 cut(s) 1413
BseAI TCCGGA 1 cut(s) 715
BseBI CCWGG 4 cut(s) 75, 573, 624, 795
BseDI CCNNGG 7 cut(s) 73, 232, 577, 650, 1065, 1308, 1392
BseGI GGATG 7 cut(s) 135, 391, 727, 1590, 1732, 1754, 2127
BseLI CCNNNNNNNGG 8 cut(s) 52, 109, 367, 578, 583, 623, 1484, 2083
BseMI GCAATG 1 cut(s) 1413
BseMII CTCAG 3 cut(s) 632, 1526, 1716
BseNI ACTGG 4 cut(s) 46, 154, 736, 1825
BseRI GAGGAG 3 cut(s) 182, 1317, 1937
BseYI CCCAGC 2 cut(s) 52, 1640
BshFI GGCC 5 cut(s) 347, 360, 571, 576, 1064
BshNI GGYRCC 2 cut(s) 376, 1704
BshTI ACCGGT 1 cut(s) 373
BsiHKAI GWGCWC 2 cut(s) 2109, 2149
BsiHKCI CYCGRG 2 cut(s) 1281, 2012
BsiSI CCGG 7 cut(s) 312, 348, 374, 380, 716, 1224, 1364
BslFI GGGAC 4 cut(s) 26, 924, 1891, 1995
BslI CCNNNNNNNGG 8 cut(s) 52, 109, 367, 578, 583, 623, 1484, 2083
BsmAI GTCTC 3 cut(s) 143, 1354, 1795
BsmFI GGGAC 4 cut(s) 26, 924, 1891, 1995
BsnI GGCC 5 cut(s) 347, 360, 571, 576, 1064
Bso31I GGTCTC 2 cut(s) 143, 1354
BsoBI CYCGRG 2 cut(s) 1281, 2012
Bsp1286I GDGCHC 3 cut(s) 445, 2109, 2149
Bsp13I TCCGGA 1 cut(s) 715
Bsp19I CCATGG 3 cut(s) 650, 1308, 1392
BspANI GGCC 5 cut(s) 347, 360, 571, 576, 1064
BspCNI CTCAG 3 cut(s) 631, 1525, 1717
BspEI TCCGGA 1 cut(s) 715
BspHI TCATGA 1 cut(s) 1384
BspLI GGNNCC 9 cut(s) 372, 378, 561, 663, 940, 1155, 1306, 1706, 2075
BspMAI CTGCAG 4 cut(s) 991, 1243, 1533, 1770
BspPI GGATC 5 cut(s) 485, 641, 1096, 1148, 1161
BspQI GCTCTTC 1 cut(s) 2137
BspT107I GGYRCC 2 cut(s) 376, 1704
BspTI CTTAAG 1 cut(s) 1502
BspTNI GGTCTC 2 cut(s) 143, 1354
BsrBI CCGCTC 2 cut(s) 23, 270
BsrDI GCAATG 1 cut(s) 1413
BsrFI RCCGGY 1 cut(s) 373
BsrI ACTGG 4 cut(s) 46, 154, 736, 1825
BssAI RCCGGY 1 cut(s) 373
BssECI CCNNGG 7 cut(s) 73, 232, 577, 650, 1065, 1308, 1392
BssNI GRCGYC 1 cut(s) 2197
BssT1I CCWWGG 4 cut(s) 577, 650, 1308, 1392
Bst2UI CCWGG 4 cut(s) 75, 573, 624, 795
Bst4CI ACNGT 7 cut(s) 542, 1176, 1438, 1718, 1849, 1905, 1957
Bst6I CTCTTC 5 cut(s) 954, 1680, 1694, 2053, 2137
BstACI GRCGYC 1 cut(s) 2197
BstAFI CTTAAG 1 cut(s) 1502
BstAPI GCANNNNNTGC 1 cut(s) 923
BstBAI YACGTR 2 cut(s) 603, 2210
BstC8I GCNNGC 5 cut(s) 100, 434, 1809, 1890, 2037
BstDEI CTNAG 6 cut(s) 204, 618, 1121, 1512, 1674, 1725
BstDSI CCRYGG 4 cut(s) 650, 1065, 1308, 1392
BstF5I GGATG 7 cut(s) 135, 391, 727, 1590, 1732, 1754, 2127
BstHHI GCGC 1 cut(s) 432
BstMAI GTCTC 3 cut(s) 143, 1354, 1795
BstMWI GCNNNNNNNGC 5 cut(s) 95, 923, 953, 1208, 1646
BstNI CCWGG 4 cut(s) 75, 573, 624, 795
BstSCI CCNGG 5 cut(s) 73, 571, 622, 793, 1223
BstSFI CTRYAG 8 cut(s) 31, 987, 1206, 1239, 1529, 1766, 1866, 1917
BstSNI TACGTA 1 cut(s) 2210
BstV2I GAAGAC 3 cut(s) 163, 341, 1067
BstX2I RGATCY 4 cut(s) 1088, 1153, 1525, 1979
BstXI CCANNNNNNTGG 1 cut(s) 1315
BstYI RGATCY 4 cut(s) 1088, 1153, 1525, 1979
BsuI GTATCC 1 cut(s) 1969
BsuRI GGCC 5 cut(s) 347, 360, 571, 576, 1064
BtgI CCRYGG 4 cut(s) 650, 1065, 1308, 1392
BtsCI GGATG 7 cut(s) 135, 391, 727, 1590, 1732, 1754, 2127
BtsI GCAGTG 2 cut(s) 1656, 1763
BtsIMutI CAGTG 3 cut(s) 1656, 1763, 1845
Cac8I GCNNGC 5 cut(s) 100, 434, 1809, 1890, 2037
CaiI CAGNNNCTG 6 cut(s) 52, 875, 995, 1205, 1259, 1751
CciI TCATGA 1 cut(s) 1384
CfoI GCGC 1 cut(s) 432
Cfr10I RCCGGY 1 cut(s) 373
Cfr13I GGNCC 4 cut(s) 112, 229, 766, 938
CseI GACGC 2 cut(s) 1979, 2205
Csp6I GTAC 3 cut(s) 28, 593, 1705
CspAI ACCGGT 1 cut(s) 373
CviQI GTAC 3 cut(s) 28, 593, 1705
DdeI CTNAG 6 cut(s) 204, 618, 1121, 1512, 1674, 1725
EaeI YGGCCR 2 cut(s) 345, 569
Eam1104I CTCTTC 5 cut(s) 954, 1680, 1694, 2053, 2137
EarI CTCTTC 5 cut(s) 954, 1680, 1694, 2053, 2137
EciI GGCGGA 1 cut(s) 262
Ecl136II GAGCTC 2 cut(s) 2107, 2147
Eco105I TACGTA 1 cut(s) 2210
Eco130I CCWWGG 4 cut(s) 577, 650, 1308, 1392
Eco147I AGGCCT 1 cut(s) 576
Eco24I GRGCYC 3 cut(s) 445, 2109, 2149
Eco31I GGTCTC 2 cut(s) 143, 1354
Eco32I GATATC 2 cut(s) 471, 1132
Eco47I GGWCC 4 cut(s) 112, 229, 766, 938
Eco53kI GAGCTC 2 cut(s) 2107, 2147
Eco57I CTGAAG 3 cut(s) 978, 1718, 1956
Eco72I CACGTG 1 cut(s) 603
Eco88I CYCGRG 2 cut(s) 1281, 2012
EcoICRI GAGCTC 2 cut(s) 2107, 2147
EcoO109I RGGNCCY 2 cut(s) 229, 938
EcoRII CCWGG 4 cut(s) 73, 571, 622, 793
EcoRV GATATC 2 cut(s) 471, 1132
EcoT14I CCWWGG 4 cut(s) 577, 650, 1308, 1392
EcoT22I ATGCAT 1 cut(s) 1636
EcoT38I GRGCYC 3 cut(s) 445, 2109, 2149
ErhI CCWWGG 4 cut(s) 577, 650, 1308, 1392
FalI AAGNNNNNCTT 2 cut(s) 547, 579
FaqI GGGAC 4 cut(s) 26, 924, 1891, 1995
FauI CCCGC 3 cut(s) 265, 286, 949
FauNDI CATATG 1 cut(s) 1013
FbaI TGATCA 2 cut(s) 685, 1263
FblI GTMKAC 1 cut(s) 219
FokI GGATG 7 cut(s) 122, 398, 734, 1597, 1719, 1741, 2134
FriOI GRGCYC 3 cut(s) 445, 2109, 2149
FspBI CTAG 3 cut(s) 1092, 1449, 1548
FspI TGCGCA 1 cut(s) 431
GlaI GCGC 1 cut(s) 431
GsaI CCCAGC 2 cut(s) 56, 1644
GsuI CTGGAG 5 cut(s) 101, 391, 645, 753, 1842
HaeIII GGCC 5 cut(s) 347, 360, 571, 576, 1064
HapII CCGG 7 cut(s) 312, 348, 374, 380, 716, 1224, 1364
HgaI GACGC 2 cut(s) 1979, 2205
HhaI GCGC 1 cut(s) 432
Hin1I GRCGYC 1 cut(s) 2197
Hin6I GCGC 1 cut(s) 430
HinP1I GCGC 1 cut(s) 430
HincII GTYRAC 2 cut(s) 220, 402
HindII GTYRAC 2 cut(s) 220, 402
HindIII AAGCTT 2 cut(s) 434, 837
HinfI GANTC 7 cut(s) 245, 498, 712, 1748, 1883, 2042, 2129
HpaII CCGG 7 cut(s) 312, 348, 374, 380, 716, 1224, 1364
HphI GGTGA 2 cut(s) 1139, 1667
Hpy166II GTNNAC 5 cut(s) 28, 220, 402, 641, 766
Hpy188I TCNGA 9 cut(s) 140, 250, 393, 783, 896, 1268, 1747, 1790, 2086
Hpy8I GTNNAC 5 cut(s) 28, 220, 402, 641, 766
Hpy99I CGWCG 4 cut(s) 71, 89, 218, 221
HpyAV CCTTC 6 cut(s) 11, 334, 350, 1054, 1292, 1718
HpyCH4III ACNGT 7 cut(s) 542, 1176, 1438, 1718, 1849, 1905, 1957
HpyCH4IV ACGT 5 cut(s) 84, 602, 1489, 1929, 2209
HpyF10VI GCNNNNNNNGC 5 cut(s) 95, 923, 953, 1208, 1646
HpyF3I CTNAG 6 cut(s) 204, 618, 1121, 1512, 1674, 1725
HpySE526I ACGT 5 cut(s) 84, 602, 1489, 1929, 2209
Hsp92I GRCGYC 1 cut(s) 2197
HspAI GCGC 1 cut(s) 430
Kpn2I TCCGGA 1 cut(s) 715
KpnI GGTACC 1 cut(s) 1708
Ksp22I TGATCA 2 cut(s) 685, 1263
LguI GCTCTTC 1 cut(s) 2137
LmnI GCTCC 7 cut(s) 20, 270, 275, 866, 1207, 1304, 1396
LweI GCATC 4 cut(s) 500, 913, 1643, 1763
MaeI CTAG 3 cut(s) 1092, 1449, 1548
MaeII ACGT 5 cut(s) 84, 602, 1489, 1929, 2209
MaeIII GTNAC 3 cut(s) 605, 1043, 1930
MbiI CCGCTC 2 cut(s) 23, 270
MfeI CAATTG 3 cut(s) 362, 588, 786
MflI RGATCY 4 cut(s) 1088, 1153, 1525, 1979
MhlI GDGCHC 3 cut(s) 445, 2109, 2149
MlyI GAGTC 4 cut(s) 239, 507, 1757, 1892
Mph1103I ATGCAT 1 cut(s) 1636
MroI TCCGGA 1 cut(s) 715
MroXI GAANNNNTTC 1 cut(s) 170
MseI TTAA 8 cut(s) 698, 806, 975, 1443, 1503, 1572, 2031, 2052
MslI CAYNNNNRTG 3 cut(s) 1050, 1583, 2114
MspA1I CMGCKG 4 cut(s) 944, 956, 1244, 1469
MspCI CTTAAG 1 cut(s) 1502
MspI CCGG 7 cut(s) 312, 348, 374, 380, 716, 1224, 1364
MspR9I CCNGG 5 cut(s) 75, 573, 624, 795, 1225
MunI CAATTG 3 cut(s) 362, 588, 786
MvaI CCWGG 4 cut(s) 75, 573, 624, 795
MwoI GCNNNNNNNGC 5 cut(s) 95, 923, 953, 1208, 1646
NciI CCSGG 1 cut(s) 1225
NcoI CCATGG 3 cut(s) 650, 1308, 1392
NdeI CATATG 1 cut(s) 1013
NlaIV GGNNCC 9 cut(s) 372, 378, 561, 663, 940, 1155, 1306, 1706, 2075
NmeAIII GCCGAG 1 cut(s) 213
NmuCI GTSAC 2 cut(s) 1043, 1930
NsbI TGCGCA 1 cut(s) 431
NsiI ATGCAT 1 cut(s) 1636
PaeR7I CTCGAG 1 cut(s) 1281
PagI TCATGA 1 cut(s) 1384
PceI AGGCCT 1 cut(s) 576
PciSI GCTCTTC 1 cut(s) 2137
PcsI WCGNNNNNNNCGW 1 cut(s) 240
PdmI GAANNNNTTC 1 cut(s) 170
PfeI GAWTC 3 cut(s) 712, 2042, 2129
PflFI GACNNNGTC 1 cut(s) 154
PflMI CCANNNNNTGG 2 cut(s) 52, 578
PfoI TCCNGGA 1 cut(s) 1223
PinAI ACCGGT 1 cut(s) 373
PleI GAGTC 4 cut(s) 239, 506, 1756, 1891
PmaCI CACGTG 1 cut(s) 603
PmlI CACGTG 1 cut(s) 603
PpsI GAGTC 4 cut(s) 239, 506, 1756, 1891
Ppu21I YACGTR 2 cut(s) 603, 2210
PpuMI RGGWCCY 2 cut(s) 229, 938
PsiI TTATAA 1 cut(s) 2153
Psp124BI GAGCTC 2 cut(s) 2109, 2149
Psp5II RGGWCCY 2 cut(s) 229, 938
Psp6I CCWGG 4 cut(s) 73, 571, 622, 793
PspCI CACGTG 1 cut(s) 603
PspFI CCCAGC 2 cut(s) 52, 1640
PspGI CCWGG 4 cut(s) 73, 571, 622, 793
PspN4I GGNNCC 9 cut(s) 372, 378, 561, 663, 940, 1155, 1306, 1706, 2075
PspPI GGNCC 4 cut(s) 112, 229, 766, 938
PspPPI RGGWCCY 2 cut(s) 229, 938
PsrI GAACNNNNNNTAC 2 cut(s) 1611, 1643
PstI CTGCAG 4 cut(s) 991, 1243, 1533, 1770
PstNI CAGNNNCTG 6 cut(s) 52, 875, 995, 1205, 1259, 1751
PsuI RGATCY 4 cut(s) 1088, 1153, 1525, 1979
PsyI GACNNNGTC 1 cut(s) 154
PvuII CAGCTG 3 cut(s) 956, 1244, 1469
RsaI GTAC 3 cut(s) 29, 594, 1706
RsaNI GTAC 3 cut(s) 28, 593, 1705
RseI CAYNNNNRTG 3 cut(s) 1050, 1583, 2114
SacI GAGCTC 2 cut(s) 2109, 2149
SalI GTCGAC 1 cut(s) 218
SapI GCTCTTC 1 cut(s) 2137
SaqAI TTAA 8 cut(s) 698, 806, 975, 1443, 1503, 1572, 2031, 2052
Sau96I GGNCC 4 cut(s) 112, 229, 766, 938
SchI GAGTC 4 cut(s) 239, 507, 1757, 1892
ScrFI CCNGG 5 cut(s) 75, 573, 624, 795, 1225
SduI GDGCHC 3 cut(s) 445, 2109, 2149
SfaNI GCATC 4 cut(s) 500, 913, 1643, 1763
SfcI CTRYAG 8 cut(s) 31, 987, 1206, 1239, 1529, 1766, 1866, 1917
Sfr274I CTCGAG 1 cut(s) 1281
SinI GGWCC 4 cut(s) 112, 229, 766, 938
SlaI CTCGAG 1 cut(s) 1281
SmiMI CAYNNNNRTG 3 cut(s) 1050, 1583, 2114
SmlI CTYRAG 4 cut(s) 931, 1181, 1281, 1502
SmoI CTYRAG 4 cut(s) 931, 1181, 1281, 1502
SnaBI TACGTA 1 cut(s) 2210
SseBI AGGCCT 1 cut(s) 576
SspI AATATT 1 cut(s) 2005
SspMI CTAG 3 cut(s) 1092, 1449, 1548
SstI GAGCTC 2 cut(s) 2109, 2149
StuI AGGCCT 1 cut(s) 576
StyD4I CCNGG 5 cut(s) 73, 571, 622, 793, 1223
StyI CCWWGG 4 cut(s) 577, 650, 1308, 1392
TaaI ACNGT 7 cut(s) 542, 1176, 1438, 1718, 1849, 1905, 1957
TaiI ACGT 5 cut(s) 87, 605, 1492, 1932, 2212
TaqI TCGA 7 cut(s) 147, 219, 243, 455, 1282, 1720, 2178
TaqII GACCGA 1 cut(s) 100
TatI WGTACW 1 cut(s) 27
TauI GCSGC 6 cut(s) 60, 92, 95, 98, 105, 311
TfiI GAWTC 3 cut(s) 712, 2042, 2129
Tru1I TTAA 8 cut(s) 698, 806, 975, 1443, 1503, 1572, 2031, 2052
Tru9I TTAA 8 cut(s) 698, 806, 975, 1443, 1503, 1572, 2031, 2052
TscAI CASTG 3 cut(s) 1656, 1770, 1852
TseFI GTSAC 2 cut(s) 1043, 1930
Tsp45I GTSAC 2 cut(s) 1043, 1930
TspRI CASTG 3 cut(s) 1656, 1770, 1852
Tth111I GACNNNGTC 1 cut(s) 154
Van91I CCANNNNNTGG 2 cut(s) 52, 578
Vha464I CTTAAG 1 cut(s) 1502
VpaK11BI GGWCC 4 cut(s) 112, 229, 766, 938
XapI RAATTY 6 cut(s) 122, 328, 819, 971, 980, 1986
XbaI TCTAGA 3 cut(s) 1091, 1448, 1547
XcmI CCANNNNNNNNNTGG 1 cut(s) 648
XhoI CTCGAG 1 cut(s) 1281
XmiI GTMKAC 1 cut(s) 219
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 3 cut(s) 1092, 1449, 1548
Zsp2I ATGCAT 1 cut(s) 1636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.