Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002450

Physical Location & Seq

Genomic Coordinates Forward (+)

17705062 .. 17708442

Gene Structure 3381 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0189800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGGCTTCTTCTTATGGAGCAAGACTGGTTGTGCCGATAGATGTGAAAAAGAAGCCATGGGAGCAGGAGCTTCCACTTCACAACCGGTGGCACCCGGATATACCACCTGTGGCAGAAGCTACGGTGGGAGAGGTTTTTCGAGTTGAAATGGTTGATTTCAGCGGGGGAGGTATCACAAAGGAATACACTGCCGAGGACATCAAGAATGCCAATCCTTCAATTGTTCATTATCTCAGCGGACCGATTAGGATTTCAGACAAGGCTGGAATTCCAGCACAGCCAGGTGATCTTCTGGTAGTTGAGATATGCAACTTGGGCCCTCTTCCAGGAGATGAATGGGGTTTCACAGCAACATTCGACAGAGAAAATGGAGGGGGATTTCTGACTGACCATTTTCCTTGTGCAACCAAAGCTATTTGGTATTTTGAAGGGATATATGCCTACTCTCCTCAAATACCAGGAGTGAGATTCCCAGGGTTAACACACCCTGGAATAGTTGGAACAGCACCATCGACGGAACTCTTGAACATATGGAATAAGAGGGAGAGAGAACTTGAGGAAAATGGAATCAAGTCTCTGAAACTATGTGAGGTTGTGCACCAACGGCCCTTGGCTAGCCTACCATCAACAAAAGGTTGCGTCCTTGGAGGGATCAAAGAGGGCACTCCCGAATGGGAAAAGATAGCAGTGGAGGCCGCAAGAACAATTCCAGGAAGAGAAAATGGTGGCAATTGTGACATCAAGAATCTTAGTAGAGGTTCAAAGGTATACCTTCCAGTATTCATTGAAGGAGCAAATCTTAGCACTGGTGACATGCACTTTTCACAGGGAGATGGTGAAATCGCATTCTGTGGTGCGATTGAGATGAGTGGTTTCCTGGAGCTCAAGTGTGAAATTATAAGGGATGGAATGAAAGAATACCTAACACCGATGGGGCCAACTCCTCTTCATGTGAATCCAATCTTTGAAATAGGTCCCGTCGAGCCAAGATTCTCGGAATGGTTGGTATTTGAGGGCATCAGTGTTGATGAGAGTGGGAAGCAGCACTACCTAGATGCAACTGTTGCTTACAAGCGTGCAGTACTGAATGCCATCGACTACCTCTCTAAATTTGGATACTCAAAAGAACAGATCTACCTTCTGCTGTCATGCTGTCCATGCGAGGGAAGAATTTCTGGAATAGTCGATGCTCCCAATGCTGTTGCAACCCTAGCAATCCCAATAGCTATCTTTGACCAGGATATTCGACCAAAAACGAACAAGGTCCCGGTTGGTCCCCGGATAGTGAGGACACCAGATGTCCTAAAATGTACTTACGATGGAAATTTGCCAACGACAAGGAACCCTAGCTCAGCAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005849 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009909 GO:0009911 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0019899 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0046483 GO:0048518 GO:0048580 GO:0048582 GO:0048831 GO:0050789 GO:0050793 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CTD_bind

Protein Analysis

453

Amino Acids

49.52

Weight (kDa)

5.36

Isoelectric Point (pI)

34.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FmdA_AmdA	PF03069	13 - 413	7.6e-165	Acetamidase/Formamidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66500 AT5G43620
fragaria_vesca	FvH4_1g20911
malus_domestica	MD02G1287400.v1.1
pyrus_communis	pycom02g24360
rosa_chinensis	RchiOBHm_Chr2g0114011
rosa_laevigata	RLG00000018074
rosa_multiflora	Rmu_sc0000431.1_g000006 Rmu_sc0000431.1_g000021 Rmu_sc0000431.1_g000030 Rmu_sc0000929.1_g000013 Rmu_sc0000929.1_g000028 Rmu_sc0000929.1_g000038 Rmu_sc0004283.1_g000005 Rmu_sc0004283.1_g000030 Rmu_sc0006252.1_g000024 Rmu_sc0007010.1_g000002 Rmu_sc0007415.1_g000029 Rmu_sc0007415.1_g000046 Rmu_sc0008397.1_g000005 Rmu_sc0010543.1_g000009
rosa_roxburghii	Rroxscaffold_2G00129140 Rroxscaffold_2G00130060
rosa_rugosa	Rorug02G0188100 Rorug02G0188300 Rorug02G0188500 Rorug02G0189100 Rorug02G0189200 Rorug02G0189800 Rorug02G0190000
rosa_samantha	Rh2CG247200 Rh2CG247400 Rh2CG248100 Rh2CG248200 Rh2CG248900 Rh2CG249300 Rh2CG249600 Rh2CG250300 Rh6DG014200
rosa_wichuraiana	Rw0G014640 Rw2G019080

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	899
AccB1I	GGYRCC	1 cut(s)	90
AccI	GTMKAC	1 cut(s)	768
AciI	CCGC	3 cut(s)	162, 237, 696
AclWI	GGATC	1 cut(s)	659
AcsI	RAATTY	4 cut(s)	267, 1109, 1170, 1324
AfaI	GTAC	2 cut(s)	1083, 1312
AfiI	CCNNNNNNNGG	2 cut(s)	326, 1163
AgeI	ACCGGT	1 cut(s)	84
AgsI	TTSAA	7 cut(s)	146, 219, 428, 526, 762, 788, 968
AjnI	CCWGG	8 cut(s)	280, 325, 457, 472, 487, 709, 876, 1236
AluBI	AGCT	6 cut(s)	70, 119, 413, 883, 1226, 1350
AluI	AGCT	6 cut(s)	70, 119, 413, 883, 1226, 1350
Alw21I	GWGCWC	2 cut(s)	600, 885
Alw26I	GTCTC	1 cut(s)	579
Alw44I	GTGCAC	1 cut(s)	596
AlwI	GGATC	1 cut(s)	659
AoxI	GGCC	4 cut(s)	316, 605, 693, 935
ApaI	GGGCCC	1 cut(s)	320
ApaLI	GTGCAC	1 cut(s)	596
ApeKI	GCWGC	1 cut(s)	1042
ApoI	RAATTY	4 cut(s)	267, 1109, 1170, 1324
AsiGI	ACCGGT	1 cut(s)	84
Asp700I	GAANNNNTTC	1 cut(s)	1171
AspS9I	GGNCC	8 cut(s)	239, 316, 317, 606, 935, 974, 1264, 1274
AsuC2I	CCSGG	3 cut(s)	95, 1268, 1279
AsuHPI	GGTGA	3 cut(s)	296, 821, 848
AsuNHI	GCTAGC	1 cut(s)	614
AvaII	GGWCC	4 cut(s)	239, 974, 1264, 1274
BaeGI	GKGCMC	3 cut(s)	320, 600, 665
BanI	GGYRCC	1 cut(s)	90
BanII	GRGCYC	2 cut(s)	320, 885
BarI	GAAGNNNNNNTAC	2 cut(s)	1031, 1063
Bbv12I	GWGCWC	2 cut(s)	600, 885
BbvI	GCAGC	1 cut(s)	1054
BccI	CCATC	7 cut(s)	517, 631, 827, 899, 925, 1100, 1313
BceAI	ACGGC	1 cut(s)	620
BciT130I	CCWGG	8 cut(s)	282, 327, 459, 474, 489, 711, 878, 1238
BciVI	GTATCC	1 cut(s)	1109
BcnI	CCSGG	3 cut(s)	95, 1268, 1279
BcoDI	GTCTC	1 cut(s)	579
BfaI	CTAG	4 cut(s)	615, 1052, 1211, 1347
BfuI	GTATCC	1 cut(s)	1109
BglII	AGATCT	1 cut(s)	1131
BisI	GCNGC	2 cut(s)	696, 1043
BlpI	GCTNAGC	1 cut(s)	1351
BlsI	GCNGC	2 cut(s)	697, 1044
BmcAI	AGTACT	1 cut(s)	1083
Bme18I	GGWCC	4 cut(s)	239, 974, 1264, 1274
BmgT120I	GGNCC	8 cut(s)	239, 316, 317, 606, 935, 974, 1264, 1274
BmiI	GGNNCC	7 cut(s)	92, 318, 936, 976, 1266, 1276, 1343
BmsI	GCATC	3 cut(s)	1026, 1045, 1177
BmtI	GCTAGC	1 cut(s)	618
BpmI	CTGGAG	1 cut(s)	899
Bpu1102I	GCTNAGC	1 cut(s)	1351
BpuEI	CTTGAG	2 cut(s)	575, 869
BpuMI	CCSGG	3 cut(s)	95, 1268, 1279
BsaJI	CCNNGG	8 cut(s)	56, 192, 472, 473, 487, 609, 643, 1277
BsaWI	WCCGGW	1 cut(s)	84
BsaXI	ACNNNNNCTCC	2 cut(s)	872, 902
Bsc4I	CCNNNNNNNGG	2 cut(s)	326, 1163
Bse118I	RCCGGY	1 cut(s)	84
Bse1I	ACTGG	3 cut(s)	30, 776, 811
BseBI	CCWGG	8 cut(s)	282, 327, 459, 474, 489, 711, 878, 1238
BseDI	CCNNGG	8 cut(s)	56, 192, 472, 473, 487, 609, 643, 1277
BseGI	GGATG	1 cut(s)	910
BseLI	CCNNNNNNNGG	2 cut(s)	326, 1163
BseMII	CTCAG	1 cut(s)	247
BseNI	ACTGG	3 cut(s)	30, 776, 811
BseRI	GAGGAG	2 cut(s)	438, 933
BseSI	GKGCMC	3 cut(s)	320, 600, 665
BseXI	GCAGC	1 cut(s)	1054
BsgI	GTGCAG	1 cut(s)	1098
BshFI	GGCC	4 cut(s)	318, 607, 695, 937
BshNI	GGYRCC	1 cut(s)	90
BshTI	ACCGGT	1 cut(s)	84
BsiHKAI	GWGCWC	2 cut(s)	600, 885
BsiSI	CCGG	4 cut(s)	85, 95, 1268, 1279
BslFI	GGGAC	3 cut(s)	960, 1250, 1260
BslI	CCNNNNNNNGG	2 cut(s)	326, 1163
BsmAI	GTCTC	1 cut(s)	579
BsmFI	GGGAC	3 cut(s)	960, 1250, 1260
BsmI	GAATGC	3 cut(s)	211, 845, 1093
BsnI	GGCC	4 cut(s)	318, 607, 695, 937
Bsp120I	GGGCCC	1 cut(s)	316
Bsp1286I	GDGCHC	4 cut(s)	320, 600, 665, 885
Bsp143I	GATC	3 cut(s)	286, 651, 1131
Bsp1720I	GCTNAGC	1 cut(s)	1351
Bsp19I	CCATGG	1 cut(s)	56
BspACI	CCGC	3 cut(s)	162, 237, 696
BspANI	GGCC	4 cut(s)	318, 607, 695, 937
BspCNI	CTCAG	1 cut(s)	246
BspLI	GGNNCC	7 cut(s)	92, 318, 936, 976, 1266, 1276, 1343
BspOI	GCTAGC	1 cut(s)	618
BspPI	GGATC	1 cut(s)	659
BspT107I	GGYRCC	1 cut(s)	90
BsrFI	RCCGGY	1 cut(s)	84
BsrI	ACTGG	3 cut(s)	30, 776, 811
BssAI	RCCGGY	1 cut(s)	84
BssECI	CCNNGG	8 cut(s)	56, 192, 472, 473, 487, 609, 643, 1277
BssMI	GATC	3 cut(s)	286, 651, 1131
BssNAI	GTATAC	1 cut(s)	769
BssT1I	CCWWGG	3 cut(s)	56, 609, 643
Bst1107I	GTATAC	1 cut(s)	769
Bst2UI	CCWGG	8 cut(s)	282, 327, 459, 474, 489, 711, 878, 1238
Bst4CI	ACNGT	2 cut(s)	124, 1063
Bst6I	CTCTTC	3 cut(s)	327, 709, 951
BstAPI	GCANNNNNTGC	1 cut(s)	1064
BstC8I	GCNNGC	2 cut(s)	616, 1077
BstDEI	CTNAG	4 cut(s)	233, 749, 800, 1351
BstDSI	CCRYGG	1 cut(s)	56
BstENI	CCTNNNNNAGG	1 cut(s)	324
BstF5I	GGATG	1 cut(s)	910
BstKTI	GATC	3 cut(s)	289, 654, 1134
BstMAI	GTCTC	1 cut(s)	579
BstMBI	GATC	3 cut(s)	286, 651, 1131
BstMWI	GCNNNNNNNGC	9 cut(s)	61, 315, 410, 604, 692, 1064, 1158, 1196, 1211
BstNI	CCWGG	8 cut(s)	282, 327, 459, 474, 489, 711, 878, 1238
BstNSI	RCATGY	1 cut(s)	817
BstSLI	GKGCMC	3 cut(s)	320, 600, 665
BstV1I	GCAGC	1 cut(s)	1054
BstX2I	RGATCY	1 cut(s)	1131
BstYI	RGATCY	1 cut(s)	1131
BstZ17I	GTATAC	1 cut(s)	769
BsuI	GTATCC	1 cut(s)	1109
BsuRI	GGCC	4 cut(s)	318, 607, 695, 937
BtgI	CCRYGG	1 cut(s)	56
BtsCI	GGATG	1 cut(s)	910
BtsI	GCAGTG	2 cut(s)	186, 693
BtsIMutI	CAGTG	4 cut(s)	186, 693, 804, 1027
Cac8I	GCNNGC	2 cut(s)	616, 1077
Cfr10I	RCCGGY	1 cut(s)	84
Cfr13I	GGNCC	8 cut(s)	239, 316, 317, 606, 935, 974, 1264, 1274
CpoI	CGGWCCG	1 cut(s)	239
CseI	GACGC	1 cut(s)	628
Csp6I	GTAC	2 cut(s)	1082, 1311
CspAI	ACCGGT	1 cut(s)	84
CspI	CGGWCCG	1 cut(s)	239
CviAII	CATG	5 cut(s)	57, 814, 950, 1149, 1158
CviQI	GTAC	2 cut(s)	1082, 1311
DdeI	CTNAG	4 cut(s)	233, 749, 800, 1351
DpnI	GATC	3 cut(s)	288, 653, 1133
DpnII	GATC	3 cut(s)	286, 651, 1131
Eam1104I	CTCTTC	3 cut(s)	327, 709, 951
EarI	CTCTTC	3 cut(s)	327, 709, 951
Ecl136II	GAGCTC	1 cut(s)	883
Eco130I	CCWWGG	3 cut(s)	56, 609, 643
Eco24I	GRGCYC	2 cut(s)	320, 885
Eco47I	GGWCC	4 cut(s)	239, 974, 1264, 1274
Eco53kI	GAGCTC	1 cut(s)	883
EcoICRI	GAGCTC	1 cut(s)	883
EcoNI	CCTNNNNNAGG	1 cut(s)	324
EcoO109I	RGGNCCY	3 cut(s)	317, 974, 1264
EcoRI	GAATTC	1 cut(s)	267
EcoRII	CCWGG	8 cut(s)	280, 325, 457, 472, 487, 709, 876, 1236
EcoT14I	CCWWGG	3 cut(s)	56, 609, 643
EcoT38I	GRGCYC	2 cut(s)	320, 885
ErhI	CCWWGG	3 cut(s)	56, 609, 643
FaeI	CATG	5 cut(s)	60, 817, 953, 1152, 1161
FaqI	GGGAC	3 cut(s)	960, 1250, 1260
FatI	CATG	5 cut(s)	56, 813, 949, 1148, 1157
FauI	CCCGC	1 cut(s)	155
FauNDI	CATATG	1 cut(s)	530
FblI	GTMKAC	1 cut(s)	768
Fnu4HI	GCNGC	2 cut(s)	696, 1043
FokI	GGATG	1 cut(s)	917
FriOI	GRGCYC	2 cut(s)	320, 885
Fsp4HI	GCNGC	2 cut(s)	696, 1043
FspBI	CTAG	4 cut(s)	615, 1052, 1211, 1347
GluI	GCNGC	2 cut(s)	696, 1043
GsuI	CTGGAG	1 cut(s)	899
HaeIII	GGCC	4 cut(s)	318, 607, 695, 937
HapII	CCGG	4 cut(s)	85, 95, 1268, 1279
HgaI	GACGC	1 cut(s)	628
Hin1II	CATG	5 cut(s)	60, 817, 953, 1152, 1161
HincII	GTYRAC	1 cut(s)	480
HindII	GTYRAC	1 cut(s)	480
HinfI	GANTC	5 cut(s)	468, 567, 745, 955, 990
HpaI	GTTAAC	1 cut(s)	480
HpaII	CCGG	4 cut(s)	85, 95, 1268, 1279
HphI	GGTGA	3 cut(s)	296, 821, 848
Hpy166II	GTNNAC	3 cut(s)	480, 598, 769
Hpy188I	TCNGA	4 cut(s)	256, 384, 579, 997
Hpy188III	TCNNGA	5 cut(s)	202, 523, 668, 742, 1176
Hpy8I	GTNNAC	3 cut(s)	480, 598, 769
Hpy99I	CGWCG	2 cut(s)	517, 983
HpyAV	CCTTC	5 cut(s)	225, 422, 782, 782, 1148
HpyCH4III	ACNGT	2 cut(s)	124, 1063
HpyCH4V	TGCA	7 cut(s)	309, 404, 598, 817, 1058, 1079, 1205
HpyF10VI	GCNNNNNNNGC	9 cut(s)	61, 315, 410, 604, 692, 1064, 1158, 1196, 1211
HpyF3I	CTNAG	4 cut(s)	233, 749, 800, 1351
Hsp92II	CATG	5 cut(s)	60, 817, 953, 1152, 1161
KspAI	GTTAAC	1 cut(s)	480
Kzo9I	GATC	3 cut(s)	286, 651, 1131
LmnI	GCTCC	6 cut(s)	17, 61, 67, 791, 880, 1195
Lsp1109I	GCAGC	1 cut(s)	1054
LweI	GCATC	3 cut(s)	1026, 1045, 1177
MaeI	CTAG	4 cut(s)	615, 1052, 1211, 1347
MaeIII	GTNAC	2 cut(s)	734, 809
MalI	GATC	3 cut(s)	288, 653, 1133
MboI	GATC	3 cut(s)	286, 651, 1131
MboII	GAAGA	5 cut(s)	281, 314, 726, 938, 1179
MfeI	CAATTG	2 cut(s)	219, 730
MflI	RGATCY	1 cut(s)	1131
MhlI	GDGCHC	4 cut(s)	320, 600, 665, 885
MluCI	AATT	8 cut(s)	219, 267, 705, 730, 894, 1109, 1170, 1324
MmeI	TCCRAC	1 cut(s)	478
MroXI	GAANNNNTTC	1 cut(s)	1171
MseI	TTAA	1 cut(s)	479
MspA1I	CMGCKG	2 cut(s)	162, 237
MspI	CCGG	4 cut(s)	85, 95, 1268, 1279
MunI	CAATTG	2 cut(s)	219, 730
Mva1269I	GAATGC	3 cut(s)	211, 845, 1093
MvaI	CCWGG	8 cut(s)	282, 327, 459, 474, 489, 711, 878, 1238
MwoI	GCNNNNNNNGC	9 cut(s)	61, 315, 410, 604, 692, 1064, 1158, 1196, 1211
NciI	CCSGG	3 cut(s)	95, 1268, 1279
NcoI	CCATGG	1 cut(s)	56
NdeI	CATATG	1 cut(s)	530
NdeII	GATC	3 cut(s)	286, 651, 1131
NheI	GCTAGC	1 cut(s)	614
NlaIII	CATG	5 cut(s)	60, 817, 953, 1152, 1161
NlaIV	GGNNCC	7 cut(s)	92, 318, 936, 976, 1266, 1276, 1343
NmeAIII	GCCGAG	1 cut(s)	217
NmuCI	GTSAC	2 cut(s)	734, 809
NspI	RCATGY	1 cut(s)	817
PasI	CCCWGGG	1 cut(s)	473
PctI	GAATGC	3 cut(s)	211, 845, 1093
PdmI	GAANNNNTTC	1 cut(s)	1171
PfeI	GAWTC	5 cut(s)	468, 567, 745, 955, 990
PfoI	TCCNGGA	3 cut(s)	325, 709, 876
PinAI	ACCGGT	1 cut(s)	84
PkrI	GCNGC	2 cut(s)	697, 1044
PpuMI	RGGWCCY	2 cut(s)	974, 1264
PsiI	TTATAA	1 cut(s)	899
Psp124BI	GAGCTC	1 cut(s)	885
Psp5II	RGGWCCY	2 cut(s)	974, 1264
Psp6I	CCWGG	8 cut(s)	280, 325, 457, 472, 487, 709, 876, 1236
PspGI	CCWGG	8 cut(s)	280, 325, 457, 472, 487, 709, 876, 1236
PspN4I	GGNNCC	7 cut(s)	92, 318, 936, 976, 1266, 1276, 1343
PspOMI	GGGCCC	1 cut(s)	316
PspPI	GGNCC	8 cut(s)	239, 316, 317, 606, 935, 974, 1264, 1274
PspPPI	RGGWCCY	2 cut(s)	974, 1264
PsuI	RGATCY	1 cut(s)	1131
RsaI	GTAC	2 cut(s)	1083, 1312
RsaNI	GTAC	2 cut(s)	1082, 1311
Rsr2I	CGGWCCG	1 cut(s)	239
RsrII	CGGWCCG	1 cut(s)	239
SacI	GAGCTC	1 cut(s)	885
SaqAI	TTAA	1 cut(s)	479
SatI	GCNGC	2 cut(s)	696, 1043
Sau3AI	GATC	3 cut(s)	286, 651, 1131
Sau96I	GGNCC	8 cut(s)	239, 316, 317, 606, 935, 974, 1264, 1274
ScaI	AGTACT	1 cut(s)	1083
SduI	GDGCHC	4 cut(s)	320, 600, 665, 885
SfaNI	GCATC	3 cut(s)	1026, 1045, 1177
SinI	GGWCC	4 cut(s)	239, 974, 1264, 1274
SmlI	CTYRAG	2 cut(s)	554, 884
SmoI	CTYRAG	2 cut(s)	554, 884
Sse9I	AATT	8 cut(s)	219, 267, 705, 730, 894, 1109, 1170, 1324
SsiI	CCGC	3 cut(s)	162, 237, 696
SspMI	CTAG	4 cut(s)	615, 1052, 1211, 1347
SstI	GAGCTC	1 cut(s)	885
StyI	CCWWGG	3 cut(s)	56, 609, 643
TaaI	ACNGT	2 cut(s)	124, 1063
TaqI	TCGA	7 cut(s)	139, 357, 512, 981, 1095, 1185, 1246
TaqII	GACCGA	1 cut(s)	256
TasI	AATT	8 cut(s)	219, 267, 705, 730, 894, 1109, 1170, 1324
TatI	WGTACW	2 cut(s)	1081, 1310
TauI	GCSGC	1 cut(s)	698
TfiI	GAWTC	5 cut(s)	468, 567, 745, 955, 990
Tru1I	TTAA	1 cut(s)	479
Tru9I	TTAA	1 cut(s)	479
TscAI	CASTG	4 cut(s)	193, 693, 811, 1027
TseFI	GTSAC	2 cut(s)	734, 809
TseI	GCWGC	1 cut(s)	1042
Tsp45I	GTSAC	2 cut(s)	734, 809
TspDTI	ATGAA	5 cut(s)	215, 348, 772, 926, 938
TspGWI	ACGGA	1 cut(s)	530
TspRI	CASTG	4 cut(s)	193, 693, 811, 1027
VneI	GTGCAC	1 cut(s)	596
VpaK11BI	GGWCC	4 cut(s)	239, 974, 1264, 1274
XagI	CCTNNNNNAGG	1 cut(s)	324
XapI	RAATTY	4 cut(s)	267, 1109, 1170, 1324
XceI	RCATGY	1 cut(s)	817
XcmI	CCANNNNNNNNNTGG	1 cut(s)	333
XmiI	GTMKAC	1 cut(s)	768
XmnI	GAANNNNTTC	1 cut(s)	1171
XspI	CTAG	4 cut(s)	615, 1052, 1211, 1347
ZrmI	AGTACT	1 cut(s)	1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.