Rorug02G0408100

YT521-B-like domain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
52022903 .. 52030043
7141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0408100.1

Sequence Viewer

Length: 2517 bp
ATGGCTATGTCCTGCAAGGATGGTAAAGGAGTAATGGATAATGGCAAGTATGTGAGGTACACACCTGAGCAGGTTGAAGCCCTTGAGAGGCTTTATCATGAATGCCCCAAACCCAGTTCGATTCGTCGCCAACAGCTCATTAGGGAGTGCCCAATTCTCTCTAACATTGAGCCTAAACAAATCAAAGTTTGGTTCCAGAACAGAAGATGCAGAGAGAAGCAGAGGAAAGAGGCTTCACGCCTCCAAGCTGTGAACAGGAAGCTCACTGCTATGAACAAGCTTTTAATGGAGGAAAACGATAGGTTGCAGAAGCAAGTGTCACACTTGGTCTATGAAAATGGCTACTTCCGCCAGCATACCCAGACCACGACGCTTGCATCCAAAGATACGAGCTGTGAATCAGTGGTGACGAGCGGTCAACACCATCTGACACCTCAGCATCCGCCAAGGGATGCTAGTCCTGCAGGACTTTTGTCCATTGCAGAAGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTAGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGAGTGGCAGCACGAGCCTGCGGCCTGGTGGGTCTAGAGCCTACACGGGTTGCAGAGATCCTCAAGGATCTGCCTTCGTGGTTGCGTGACTGCCGCACTGTAGATGTCTTGAATGTACTGCCTACAGCAAACGGTGGAACCATTGAGCTCCTTTACATGCAGCTCTATGCGCCAACCACTTTGGCGCCTGCATGTGACTTCTGGATGCTCCGCTATACTTCTGTTTTAGAGGATGGCAGCCTTGTGGTTTGTGTGAGATCTCTCAAAAACACACAAAATGGTCCATCCATGCCTCCGGTGCAGCATTTTGTTAGAGCAGAAATGCTGCCTAGTGGATACCTGATACGACCATGTGAAGGAGGTGGCTCAATTATACACATTGTTGATCACATGGATTTGGAGCCTTGTGGTGTGCCAGAAGTATTGCGCCCATTGTATGAATCTTCAGCTGTTCTTGCCCAAAAGATGACAATGGCGGCTTTACGCCAGCTGAGGCAGGTAGCCCATGAAGTTTCTCAATCTAGTGTCACTGGCTGGGGCAGACGACCTGCAGCTCTACGAGCACTAAGCCAGAGGCTTAGCAGGGGATTTAATGAGGCACTAAATGGATTTACTGATGAGGGGTGGTCATTGATGGGGAATGATGGCATGGATGATGTCACTATCCTCATAAACTCATCCCCTGACAAGCTAATGGGTTTAAATCTTTCATTTGGTAATGGATATCCAGCTGTCAGCAATGCCGTCTTATGTGCTAAAGCATCAATGCTTTTACAGAATGTGCCTCCTGCTATCCTTCTTAGGTTCCTACGGGAGCATAGGTCAGAATGGGCAGACAACAATATTGATGCTTACTCAGCTGCAGCTGTTAAAGTTGGCCCCTGTAGCTTAGCGGGGTCTCGAGTTGGAAGTTTTGGCGGTCAAGTTATACTCCCCCTAGCTCACACTATTGAGCATGAAGAGTTCTTGGAAGTCATTAAACTGGAGGGTATTGGCCATTCTCCTGACGATCCAATGATGCAGACTAGAGAGATGTTCCTTTTGCAACTATGCAGTGGAATGGACGAGAATGCTGTTGGTTCCTGTGCTGAACTGATTTTTGCTCCAATTGATGCTTCCTTTGCTGATGATGCACCTCTCCTACCTTCTGGTTTTCGCATCATTCCTCTTGATTCTGGGAAGGAAGCCTCCAGTCCAAATCGCACATTGGATCTTGCTTCTGCTCTTGAAGTTGGGCCGACTGGAAACAGGGCATCTAGTGAATATTCTGCAAATGCGGGTTGCGTGAGATCTGTGATGACTATAGCATTTGAATTTGCATTCGAGAGCCACATGCAAGAGCATGTAGCATCCATGGCTCGACAATATGTTCGCAGCATCATATCTTCAGTTCAGAGGGTGGCATTAGCACTCTCTCCTTCACATTTAAGTTCGCATGCTGGTCTTCGTTCACCACTTGGTACCCCTGAAGCGCAGACCCTAGCTCGTTGGATATGCAACAGTTACAGGGGATATTTGGGTGTGGAGCTGCTCAAATCCTGCAACGAAGGAAGTGAATCCAATCTCAAATCGCTGTGGCATCACTCTGATGCAATTATGTGCTGCTCTCTGAAGGCTGTGCCAGTTTTCACCTTCGCAAACCAGGCAGGACTTGACATGCTTGAGACAACCTTGGTTGCACTGCAAGACATAGCTTTGGAAAAGATTTTTGATGACCATGGACGCAAGACTCTCTTCTCTGAGTTCCCGCAGATAATGCAACAGGGTTTTGCTTGTCTTCAAGGTGGCATCTGTCTCTCAAGCATGGGGCGACCAGTGTCATATGAAAGAGCAGTAGCTTGGAAGGTGTTGAATGAAGATGAGACGGCTCACTGCATAAGTTTCTTGTTTGTGAACTGGTCTTTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

838

Amino Acids

91.9

Weight (kDa)

6.06

Isoelectric Point (pI)

47.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 16 - 74 1.3e-15 Homeodomain
START PF01852 160 - 368 4.4e-50 START domain
MEKHLA PF08670 695 - 837 1.3e-46 MEKHLA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 61, 1093, 1162
Acc65I GGTACC 1 cut(s) 2066
AccB1I GGYRCC 2 cut(s) 790, 2066
AccBSI CCGCTC 1 cut(s) 414
AccIII TCCGGA 1 cut(s) 565
AclWI GGATC 4 cut(s) 658, 681, 1610, 1824
AcoI YGGCCR 1 cut(s) 1600
AcsI RAATTY 1 cut(s) 1919
AcuI CTGAAG 4 cut(s) 1035, 1977, 2094, 2237
AcyI GRCGYC 1 cut(s) 791
AfaI GTAC 3 cut(s) 59, 723, 2068
AfiI CCNNNNNNNGG 2 cut(s) 87, 962
AgsI TTSAA 7 cut(s) 77, 510, 718, 1835, 1919, 2387, 2458
AhdI GACNNNNNGTC 1 cut(s) 414
AjnI CCWGG 4 cut(s) 547, 559, 630, 2247
AjuI GAANNNNNNNTTGG 2 cut(s) 1705, 1737
AleI CACNNNNGTG 1 cut(s) 608
Alw21I GWGCWC 2 cut(s) 756, 1171
Alw26I GTCTC 4 cut(s) 1509, 2264, 2405, 2462
AlwI GGATC 4 cut(s) 658, 681, 1610, 1824
Ama87I CYCGRG 1 cut(s) 1506
Aor13HI TCCGGA 1 cut(s) 565
AoxI GGCC 4 cut(s) 628, 1483, 1600, 1841
ApoI RAATTY 1 cut(s) 1919
ArsI GACNNNNNNTTYG 2 cut(s) 1959, 1991
Asp718I GGTACC 1 cut(s) 2066
AspLEI GCGC 4 cut(s) 778, 793, 1035, 2080
AspS9I GGNCC 5 cut(s) 538, 563, 887, 1484, 1841
AsuHPI GGTGA 3 cut(s) 418, 2049, 2227
AvaI CYCGRG 1 cut(s) 1506
AvaII GGWCC 3 cut(s) 538, 563, 887
BaeGI GKGCMC 1 cut(s) 152
BalI TGGCCA 1 cut(s) 1602
BanI GGYRCC 2 cut(s) 790, 2066
BanII GRGCYC 1 cut(s) 756
BauI CACGAG 1 cut(s) 618
BbsI GAAGAC 2 cut(s) 2042, 2375
Bbv12I GWGCWC 2 cut(s) 756, 1171
BbvCI CCTCAGC 2 cut(s) 435, 1097
BccI CCATC 6 cut(s) 14, 432, 833, 898, 1234, 1244
BceAI ACGGC 2 cut(s) 1334, 2487
BciT130I CCWGG 4 cut(s) 549, 561, 632, 2249
BciVI GTATCC 1 cut(s) 935
BclI TGATCA 1 cut(s) 991
BcoDI GTCTC 4 cut(s) 1509, 2264, 2405, 2462
BfaI CTAG 8 cut(s) 456, 641, 936, 1128, 1544, 1632, 1863, 2087
BfmI CTRYAG 8 cut(s) 462, 528, 705, 729, 1155, 1467, 1489, 1908
BfoI RGCGCY 1 cut(s) 794
BfuAI ACCTGC 3 cut(s) 61, 1093, 1162
BfuI GTATCC 1 cut(s) 935
BglII AGATCT 2 cut(s) 863, 1895
BlpI GCTNAGC 2 cut(s) 1184, 1495
Bme1390I CCNGG 4 cut(s) 549, 561, 632, 2249
Bme18I GGWCC 3 cut(s) 538, 563, 887
BmeRI GACNNNNNGTC 1 cut(s) 414
BmeT110I CYCGRG 1 cut(s) 1506
BmgT120I GGNCC 5 cut(s) 538, 563, 887, 1484, 1841
BmiI GGNNCC 9 cut(s) 194, 539, 745, 792, 1008, 1412, 1486, 1687, 2068
BmrFI CCNGG 4 cut(s) 549, 561, 632, 2249
BmrI ACTGGG 1 cut(s) 108
BmuI ACTGGG 1 cut(s) 108
BoxI GACNNNNGTC 2 cut(s) 472, 2422
BpiI GAAGAC 2 cut(s) 2042, 2375
BpmI CTGGAG 3 cut(s) 627, 1610, 1780
Bpu10I CCTNAGC 3 cut(s) 66, 435, 1097
Bpu1102I GCTNAGC 2 cut(s) 1184, 1495
BpuEI CTTGAG 4 cut(s) 104, 653, 2288, 2389
BsaHI GRCGYC 1 cut(s) 791
BsaI GGTCTC 1 cut(s) 1509
BsaJI CCNNGG 4 cut(s) 446, 1959, 2277, 2323
BsaWI WCCGGW 2 cut(s) 565, 901
BsaXI ACNNNNNCTCC 2 cut(s) 1412, 1442
Bsc4I CCNNNNNNNGG 2 cut(s) 87, 962
Bse3DI GCAATG 2 cut(s) 477, 1351
BseAI TCCGGA 1 cut(s) 565
BseBI CCWGG 4 cut(s) 549, 561, 632, 2249
BseDI CCNNGG 4 cut(s) 446, 1959, 2277, 2323
BseLI CCNNNNNNNGG 2 cut(s) 87, 962
BseMI GCAATG 2 cut(s) 477, 1351
BseMII CTCAG 5 cut(s) 57, 449, 1088, 1476, 2337
BseSI GKGCMC 1 cut(s) 152
BseYI CCCAGC 1 cut(s) 1140
BsgI GTGCAG 1 cut(s) 926
BshFI GGCC 4 cut(s) 630, 1485, 1602, 1843
BshNI GGYRCC 2 cut(s) 790, 2066
BsiHKAI GWGCWC 2 cut(s) 756, 1171
BsiHKCI CYCGRG 1 cut(s) 1506
BsiSI CCGG 2 cut(s) 566, 902
BslI CCNNNNNNNGG 2 cut(s) 87, 962
BsmAI GTCTC 4 cut(s) 1509, 2264, 2405, 2462
BsmBI CGTCTC 1 cut(s) 2462
BsmI GAATGC 3 cut(s) 107, 1681, 1925
BsnI GGCC 4 cut(s) 630, 1485, 1602, 1843
Bso31I GGTCTC 1 cut(s) 1509
BsoBI CYCGRG 1 cut(s) 1506
Bsp1286I GDGCHC 3 cut(s) 152, 756, 1171
Bsp13I TCCGGA 1 cut(s) 565
Bsp143I GATC 7 cut(s) 663, 673, 863, 991, 1615, 1816, 1895
Bsp1720I GCTNAGC 2 cut(s) 1184, 1495
Bsp19I CCATGG 2 cut(s) 1959, 2323
BspANI GGCC 4 cut(s) 630, 1485, 1602, 1843
BspCNI CTCAG 5 cut(s) 58, 448, 1089, 1475, 2338
BspEI TCCGGA 1 cut(s) 565
BspHI TCATGA 1 cut(s) 97
BspLI GGNNCC 9 cut(s) 194, 539, 745, 792, 1008, 1412, 1486, 1687, 2068
BspMAI CTGCAG 3 cut(s) 466, 1159, 1471
BspMI ACCTGC 3 cut(s) 61, 1093, 1162
BspPI GGATC 4 cut(s) 658, 681, 1610, 1824
BspT107I GGYRCC 2 cut(s) 790, 2066
BspTNI GGTCTC 1 cut(s) 1509
BsrBI CCGCTC 1 cut(s) 414
BsrDI GCAATG 2 cut(s) 477, 1351
BssECI CCNNGG 4 cut(s) 446, 1959, 2277, 2323
BssMI GATC 7 cut(s) 663, 673, 863, 991, 1615, 1816, 1895
BssNI GRCGYC 1 cut(s) 791
BssSI CACGAG 1 cut(s) 618
BssT1I CCWWGG 4 cut(s) 446, 1959, 2277, 2323
Bst2BI CACGAG 1 cut(s) 618
Bst2UI CCWGG 4 cut(s) 549, 561, 632, 2249
Bst4CI ACNGT 3 cut(s) 706, 740, 2108
Bst6I CTCTTC 2 cut(s) 1560, 2345
BstACI GRCGYC 1 cut(s) 791
BstAPI GCANNNNNTGC 1 cut(s) 2362
BstC8I GCNNGC 6 cut(s) 353, 375, 625, 795, 1094, 2043
BstDEI CTNAG 9 cut(s) 66, 435, 1097, 1172, 1184, 1406, 1462, 1495, 2346
BstDSI CCRYGG 2 cut(s) 1959, 2323
BstH2I RGCGCY 1 cut(s) 794
BstHHI GCGC 4 cut(s) 778, 793, 1035, 2080
BstKTI GATC 7 cut(s) 666, 676, 866, 994, 1618, 1819, 1898
BstMAI GTCTC 4 cut(s) 1509, 2264, 2405, 2462
BstMBI GATC 7 cut(s) 663, 673, 863, 991, 1615, 1816, 1895
BstNI CCWGG 4 cut(s) 549, 561, 632, 2249
BstNSI RCATGY 6 cut(s) 766, 801, 1942, 1952, 2045, 2266
BstPAI GACNNNNGTC 2 cut(s) 472, 2422
BstSCI CCNGG 4 cut(s) 547, 559, 630, 2247
BstSFI CTRYAG 8 cut(s) 462, 528, 705, 729, 1155, 1467, 1489, 1908
BstSLI GKGCMC 1 cut(s) 152
BstV2I GAAGAC 2 cut(s) 2042, 2375
BstX2I RGATCY 5 cut(s) 663, 673, 863, 1816, 1895
BstXI CCANNNNNNTGG 1 cut(s) 548
BstYI RGATCY 5 cut(s) 663, 673, 863, 1816, 1895
BsuI GTATCC 1 cut(s) 935
BsuRI GGCC 4 cut(s) 630, 1485, 1602, 1843
BtgI CCRYGG 2 cut(s) 1959, 2323
BtsI GCAGTG 4 cut(s) 264, 1666, 2285, 2476
BtsIMutI CAGTG 9 cut(s) 264, 408, 603, 702, 1134, 1666, 2285, 2427, 2476
BveI ACCTGC 3 cut(s) 61, 1093, 1162
Cac8I GCNNGC 6 cut(s) 353, 375, 625, 795, 1094, 2043
CciI TCATGA 1 cut(s) 97
CfoI GCGC 4 cut(s) 778, 793, 1035, 2080
Cfr13I GGNCC 5 cut(s) 538, 563, 887, 1484, 1841
CseI GACGC 2 cut(s) 379, 2337
Csp6I GTAC 3 cut(s) 58, 722, 2067
CspCI CAANNNNNGTGG 2 cut(s) 355, 390
CviQI GTAC 3 cut(s) 58, 722, 2067
DdeI CTNAG 9 cut(s) 66, 435, 1097, 1172, 1184, 1406, 1462, 1495, 2346
DinI GGCGCC 1 cut(s) 792
DpnI GATC 7 cut(s) 665, 675, 865, 993, 1617, 1818, 1897
DpnII GATC 7 cut(s) 663, 673, 863, 991, 1615, 1816, 1895
DraI TTTAAA 1 cut(s) 1308
DriI GACNNNNNGTC 1 cut(s) 414
EaeI YGGCCR 1 cut(s) 1600
Eam1104I CTCTTC 2 cut(s) 1560, 2345
Eam1105I GACNNNNNGTC 1 cut(s) 414
EarI CTCTTC 2 cut(s) 1560, 2345
EciI GGCGGA 2 cut(s) 338, 432
Ecl136II GAGCTC 1 cut(s) 754
Eco130I CCWWGG 4 cut(s) 446, 1959, 2277, 2323
Eco24I GRGCYC 1 cut(s) 756
Eco31I GGTCTC 1 cut(s) 1509
Eco32I GATATC 1 cut(s) 1331
Eco47I GGWCC 3 cut(s) 538, 563, 887
Eco53kI GAGCTC 1 cut(s) 754
Eco57I CTGAAG 4 cut(s) 1035, 1977, 2094, 2237
Eco88I CYCGRG 1 cut(s) 1506
EcoICRI GAGCTC 1 cut(s) 754
EcoRII CCWGG 4 cut(s) 547, 559, 630, 2247
EcoRV GATATC 1 cut(s) 1331
EcoT14I CCWWGG 4 cut(s) 446, 1959, 2277, 2323
EcoT38I GRGCYC 1 cut(s) 756
EgeI GGCGCC 1 cut(s) 792
EheI GGCGCC 1 cut(s) 792
ErhI CCWWGG 4 cut(s) 446, 1959, 2277, 2323
Esp3I CGTCTC 1 cut(s) 2462
FalI AAGNNNNNCTT 2 cut(s) 2324, 2356
FauI CCCGC 3 cut(s) 1492, 1876, 2361
FauNDI CATATG 1 cut(s) 2428
FbaI TGATCA 1 cut(s) 991
FriOI GRGCYC 1 cut(s) 756
FspBI CTAG 8 cut(s) 456, 641, 936, 1128, 1544, 1632, 1863, 2087
GlaI GCGC 4 cut(s) 777, 792, 1034, 2079
GsaI CCCAGC 1 cut(s) 1144
GsuI CTGGAG 3 cut(s) 627, 1610, 1780
HaeII RGCGCY 1 cut(s) 794
HaeIII GGCC 4 cut(s) 630, 1485, 1602, 1843
HapII CCGG 2 cut(s) 566, 902
HgaI GACGC 2 cut(s) 379, 2337
HhaI GCGC 4 cut(s) 778, 793, 1035, 2080
Hin1I GRCGYC 1 cut(s) 791
Hin6I GCGC 4 cut(s) 776, 791, 1033, 2078
HinP1I GCGC 4 cut(s) 776, 791, 1033, 2078
HincII GTYRAC 1 cut(s) 419
HindII GTYRAC 1 cut(s) 419
HindIII AAGCTT 1 cut(s) 278
HinfI GANTC 8 cut(s) 121, 398, 569, 579, 1046, 1778, 2162, 2335
HpaII CCGG 2 cut(s) 566, 902
HphI GGTGA 3 cut(s) 418, 2049, 2227
Hpy166II GTNNAC 5 cut(s) 60, 253, 419, 2057, 2500
Hpy188I TCNGA 6 cut(s) 429, 1432, 2001, 2194, 2217, 2347
Hpy8I GTNNAC 5 cut(s) 60, 253, 419, 2057, 2500
Hpy99I CGWCG 2 cut(s) 129, 373
HpyCH4III ACNGT 3 cut(s) 706, 740, 2108
HpyF3I CTNAG 9 cut(s) 66, 435, 1097, 1172, 1184, 1406, 1462, 1495, 2346
Hsp92I GRCGYC 1 cut(s) 791
HspAI GCGC 4 cut(s) 776, 791, 1033, 2078
KasI GGCGCC 1 cut(s) 790
Kpn2I TCCGGA 1 cut(s) 565
KpnI GGTACC 1 cut(s) 2070
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 7 cut(s) 663, 673, 863, 991, 1615, 1816, 1895
LmnI GCTCC 6 cut(s) 759, 819, 1006, 1420, 1714, 2131
MaeI CTAG 8 cut(s) 456, 641, 936, 1128, 1544, 1632, 1863, 2087
MaeIII GTNAC 7 cut(s) 318, 406, 692, 800, 1132, 1264, 2108
MalI GATC 7 cut(s) 665, 675, 865, 993, 1617, 1818, 1897
MbiI CCGCTC 1 cut(s) 414
MboI GATC 7 cut(s) 663, 673, 863, 991, 1615, 1816, 1895
MboII GAAGA 9 cut(s) 216, 497, 1041, 1577, 1983, 2042, 2332, 2375, 2474
MfeI CAATTG 1 cut(s) 1713
MflI RGATCY 5 cut(s) 663, 673, 863, 1816, 1895
MhlI GDGCHC 3 cut(s) 152, 756, 1171
MlsI TGGCCA 1 cut(s) 1602
MluCI AATT 5 cut(s) 153, 975, 1713, 1919, 2199
MluNI TGGCCA 1 cut(s) 1602
Mly113I GGCGCC 1 cut(s) 791
MlyI GAGTC 1 cut(s) 2329
MmeI TCCRAC 2 cut(s) 1492, 2075
Mox20I TGGCCA 1 cut(s) 1602
MroI TCCGGA 1 cut(s) 565
MscI TGGCCA 1 cut(s) 1602
MseI TTAA 6 cut(s) 284, 1197, 1307, 1476, 1584, 2033
MslI CAYNNNNRTG 3 cut(s) 269, 608, 2193
Msp20I TGGCCA 1 cut(s) 1602
MspA1I CMGCKG 5 cut(s) 1055, 1096, 1337, 1466, 1472
MspI CCGG 2 cut(s) 566, 902
MspR9I CCNGG 4 cut(s) 549, 561, 632, 2249
MunI CAATTG 1 cut(s) 1713
Mva1269I GAATGC 3 cut(s) 107, 1681, 1925
MvaI CCWGG 4 cut(s) 549, 561, 632, 2249
NarI GGCGCC 1 cut(s) 791
NcoI CCATGG 2 cut(s) 1959, 2323
NdeI CATATG 1 cut(s) 2428
NdeII GATC 7 cut(s) 663, 673, 863, 991, 1615, 1816, 1895
NlaIV GGNNCC 9 cut(s) 194, 539, 745, 792, 1008, 1412, 1486, 1687, 2068
NmuCI GTSAC 6 cut(s) 318, 406, 692, 800, 1132, 1264
NspI RCATGY 6 cut(s) 766, 801, 1942, 1952, 2045, 2266
OliI CACNNNNGTG 1 cut(s) 608
PaeI GCATGC 1 cut(s) 2045
PaeR7I CTCGAG 1 cut(s) 1506
PagI TCATGA 1 cut(s) 97
PctI GAATGC 3 cut(s) 107, 1681, 1925
PfeI GAWTC 7 cut(s) 121, 398, 569, 579, 1046, 1778, 2162
PleI GAGTC 1 cut(s) 2329
PluTI GGCGCC 1 cut(s) 794
PpsI GAGTC 1 cut(s) 2329
PshAI GACNNNNGTC 2 cut(s) 472, 2422
Psp124BI GAGCTC 1 cut(s) 756
Psp6I CCWGG 4 cut(s) 547, 559, 630, 2247
PspFI CCCAGC 1 cut(s) 1140
PspGI CCWGG 4 cut(s) 547, 559, 630, 2247
PspN4I GGNNCC 9 cut(s) 194, 539, 745, 792, 1008, 1412, 1486, 1687, 2068
PspPI GGNCC 5 cut(s) 538, 563, 887, 1484, 1841
PstI CTGCAG 3 cut(s) 466, 1159, 1471
PsuI RGATCY 5 cut(s) 663, 673, 863, 1816, 1895
PvuII CAGCTG 5 cut(s) 1055, 1096, 1337, 1466, 1472
RsaI GTAC 3 cut(s) 59, 723, 2068
RsaNI GTAC 3 cut(s) 58, 722, 2067
RseI CAYNNNNRTG 3 cut(s) 269, 608, 2193
SacI GAGCTC 1 cut(s) 756
SaqAI TTAA 6 cut(s) 284, 1197, 1307, 1476, 1584, 2033
Sau3AI GATC 7 cut(s) 663, 673, 863, 991, 1615, 1816, 1895
Sau96I GGNCC 5 cut(s) 538, 563, 887, 1484, 1841
SbfI CCTGCAGG 1 cut(s) 466
SchI GAGTC 1 cut(s) 2329
ScrFI CCNGG 4 cut(s) 549, 561, 632, 2249
SdaI CCTGCAGG 1 cut(s) 466
SduI GDGCHC 3 cut(s) 152, 756, 1171
SfcI CTRYAG 8 cut(s) 462, 528, 705, 729, 1155, 1467, 1489, 1908
SfoI GGCGCC 1 cut(s) 792
Sfr274I CTCGAG 1 cut(s) 1506
SinI GGWCC 3 cut(s) 538, 563, 887
SlaI CTCGAG 1 cut(s) 1506
SmiMI CAYNNNNRTG 3 cut(s) 269, 608, 2193
SmlI CTYRAG 5 cut(s) 83, 668, 1506, 2267, 2404
SmoI CTYRAG 5 cut(s) 83, 668, 1506, 2267, 2404
SphI GCATGC 1 cut(s) 2045
Sse8387I CCTGCAGG 1 cut(s) 466
Sse9I AATT 5 cut(s) 153, 975, 1713, 1919, 2199
SspDI GGCGCC 1 cut(s) 790
SspI AATATT 2 cut(s) 1450, 1871
SspMI CTAG 8 cut(s) 456, 641, 936, 1128, 1544, 1632, 1863, 2087
SstI GAGCTC 1 cut(s) 756
StyD4I CCNGG 4 cut(s) 547, 559, 630, 2247
StyI CCWWGG 4 cut(s) 446, 1959, 2277, 2323
TaaI ACNGT 3 cut(s) 706, 740, 2108
TaqI TCGA 4 cut(s) 119, 1507, 1929, 1966
TasI AATT 5 cut(s) 153, 975, 1713, 1919, 2199
TatI WGTACW 1 cut(s) 721
TauI GCSGC 3 cut(s) 630, 702, 1085
TfiI GAWTC 7 cut(s) 121, 398, 569, 579, 1046, 1778, 2162
Tru1I TTAA 6 cut(s) 284, 1197, 1307, 1476, 1584, 2033
Tru9I TTAA 6 cut(s) 284, 1197, 1307, 1476, 1584, 2033
TscAI CASTG 9 cut(s) 271, 408, 610, 709, 1141, 1666, 2292, 2427, 2483
TseFI GTSAC 6 cut(s) 318, 406, 692, 800, 1132, 1264
Tsp45I GTSAC 6 cut(s) 318, 406, 692, 800, 1132, 1264
TspRI CASTG 9 cut(s) 271, 408, 610, 709, 1141, 1666, 2292, 2427, 2483
VpaK11BI GGWCC 3 cut(s) 538, 563, 887
XapI RAATTY 1 cut(s) 1919
XbaI TCTAGA 1 cut(s) 640
XceI RCATGY 6 cut(s) 766, 801, 1942, 1952, 2045, 2266
XhoI CTCGAG 1 cut(s) 1506
XspI CTAG 8 cut(s) 456, 641, 936, 1128, 1544, 1632, 1863, 2087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.